BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2148.p (217 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775183.1| allophanate hydrolase subunit 1 [Herbaspiril... 355 2e-96 ref|YP_004157291.1| allophanate hydrolase subunit 1 [Variovorax ... 275 5e-72 ref|YP_004229817.1| Allophanate hydrolase subunit 1 [Burkholderi... 269 2e-70 ref|YP_002946244.1| allophanate hydrolase subunit 1 [Variovorax ... 268 5e-70 ref|ZP_02887185.1| Allophanate hydrolase subunit 1 [Burkholderia... 266 1e-69 >ref|YP_003775183.1| allophanate hydrolase subunit 1 [Herbaspirillum seropedicae SmR1] gb|ADJ63275.1| allophanate hydrolase subunit 1 protein [Herbaspirillum seropedicae SmR1] Length = 216 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 189/214 (88%), Positives = 196/214 (91%) Query: 4 PQLHPLGDRALLCSLPPPATLPQQQRIWALATLASEWEEVSEVVPGMNNLTLITKRPVAD 63 PQLHPLGDRALLCSLP PATLPQQQRIWALA LA +WEEVSEVVPGMNNLTLIT RPV D Sbjct: 3 PQLHPLGDRALLCSLPAPATLPQQQRIWALAELAGQWEEVSEVVPGMNNLTLITTRPVVD 62 Query: 64 LDTLTQRVLKSWPKLGTTASEGRTVEIPVVYGGSAGPDLDNVARHTGLSTREVIERHSSA 123 L+ L R+ +WPKL S GRTVEIPVVYGGSAGPDLDNVARHTGLST EVI RHS+A Sbjct: 63 LEILAHRIETTWPKLSGERSVGRTVEIPVVYGGSAGPDLDNVARHTGLSTEEVIARHSNA 122 Query: 124 EYVVYFLGFLPGFAYMGGLDASLATPRHTTPRVSIPAGSVGIGGEQTGIYPMASPGGWQL 183 EYVVYFLGFLPGFAYMGGLDASLATPRHTTPRVSIPAGSVGIGGEQTG+YPMASPGGWQL Sbjct: 123 EYVVYFLGFLPGFAYMGGLDASLATPRHTTPRVSIPAGSVGIGGEQTGVYPMASPGGWQL 182 Query: 184 IGRTGLQLFDPSQQPPTLLRPGDRVRFTVERVAS 217 IGRT LQLFDPSQ+PPTLLRPGDRVRFTVERVAS Sbjct: 183 IGRTTLQLFDPSQEPPTLLRPGDRVRFTVERVAS 216 >ref|YP_004157291.1| allophanate hydrolase subunit 1 [Variovorax paradoxus EPS] gb|ADU39180.1| Allophanate hydrolase subunit 1 [Variovorax paradoxus EPS] Length = 220 Score = 275 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 145/217 (66%), Positives = 165/217 (76%) Query: 1 MQPPQLHPLGDRALLCSLPPPATLPQQQRIWALATLASEWEEVSEVVPGMNNLTLITKRP 60 + PP+LH LGD ALLC LP PATL QQQRIWALA A EW V EV+PGMNNLTL Sbjct: 4 LPPPRLHLLGDAALLCELPAPATLVQQQRIWALAAEAREWSGVGEVLPGMNNLTLTFDPT 63 Query: 61 VADLDTLTQRVLKSWPKLGTTASEGRTVEIPVVYGGSAGPDLDNVARHTGLSTREVIERH 120 +LD LT +VL++WPKL A EGR VEIPV YGG GPDL +VA HTG + EV+ RH Sbjct: 64 AIELDALTAQVLEAWPKLSAKAVEGRLVEIPVAYGGEHGPDLGDVAAHTGFTPAEVVRRH 123 Query: 121 SSAEYVVYFLGFLPGFAYMGGLDASLATPRHTTPRVSIPAGSVGIGGEQTGIYPMASPGG 180 S+ EYVVY LGFLPGFA+MGGL LATPR PR ++PA SVGIGGEQTGIYP+ SPGG Sbjct: 124 SAGEYVVYLLGFLPGFAFMGGLAPELATPRRAEPRTAVPARSVGIGGEQTGIYPLVSPGG 183 Query: 181 WQLIGRTGLQLFDPSQQPPTLLRPGDRVRFTVERVAS 217 WQLIGRT L++FDP+ + PTLLRPGDRVRF VE V + Sbjct: 184 WQLIGRTSLEMFDPAAESPTLLRPGDRVRFVVESVET 220 >ref|YP_004229817.1| Allophanate hydrolase subunit 1 [Burkholderia sp. CCGE1001] gb|ADX56757.1| Allophanate hydrolase subunit 1 [Burkholderia sp. CCGE1001] Length = 217 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 139/212 (65%), Positives = 163/212 (76%) Query: 1 MQPPQLHPLGDRALLCSLPPPATLPQQQRIWALATLASEWEEVSEVVPGMNNLTLITKRP 60 M P + PLGD AL+C PPPATL Q+R+WA+A LA +W V EVVPGMNNLTL+ Sbjct: 1 MSQPHIFPLGDAALVCEAPPPATLDCQRRVWAVAELARDWPHVLEVVPGMNNLTLVFDPL 60 Query: 61 VADLDTLTQRVLKSWPKLGTTASEGRTVEIPVVYGGSAGPDLDNVARHTGLSTREVIERH 120 AD D L++R+ ++W G + GR VEIPV YGG GPDL VA HTGL REVIERH Sbjct: 61 EADRDALSKRLQETWDAAGQAPAAGRDVEIPVQYGGEFGPDLGAVASHTGLGVREVIERH 120 Query: 121 SSAEYVVYFLGFLPGFAYMGGLDASLATPRHTTPRVSIPAGSVGIGGEQTGIYPMASPGG 180 SS +YVV+FLGF PGFAYMGGLD +L TPR +PR+ +PAGSVGIGGEQTGIYP SPGG Sbjct: 121 SSGQYVVFFLGFQPGFAYMGGLDEALHTPRRASPRLEVPAGSVGIGGEQTGIYPATSPGG 180 Query: 181 WQLIGRTGLQLFDPSQQPPTLLRPGDRVRFTV 212 WQLIGRT L LFDP+++PPTLL+PGDRVRFT+ Sbjct: 181 WQLIGRTELPLFDPARRPPTLLQPGDRVRFTI 212 >ref|YP_002946244.1| allophanate hydrolase subunit 1 [Variovorax paradoxus S110] gb|ACS20978.1| Allophanate hydrolase subunit 1 [Variovorax paradoxus S110] Length = 215 Score = 268 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 141/214 (65%), Positives = 162/214 (75%) Query: 4 PQLHPLGDRALLCSLPPPATLPQQQRIWALATLASEWEEVSEVVPGMNNLTLITKRPVAD 63 P+LHPLGD ALLC L PPATL QQQ+IWAL +W V EV+PGMNNLTL D Sbjct: 2 PRLHPLGDAALLCELAPPATLAQQQQIWALGAEVQQWAGVGEVLPGMNNLTLTFDPTAID 61 Query: 64 LDTLTQRVLKSWPKLGTTASEGRTVEIPVVYGGSAGPDLDNVARHTGLSTREVIERHSSA 123 ++ L RV ++WP+L TA EGR VEIPV YGG GPDL +VA H GL+ EV+ RHS+A Sbjct: 62 IEALMARVNEAWPQLSATAIEGRRVEIPVAYGGEHGPDLADVAAHAGLTPAEVVRRHSAA 121 Query: 124 EYVVYFLGFLPGFAYMGGLDASLATPRHTTPRVSIPAGSVGIGGEQTGIYPMASPGGWQL 183 +YVVY LGFLPGFA+MGGL LATPR PR ++PA SVGIGGEQTGIYP+ SPGGWQL Sbjct: 122 DYVVYLLGFLPGFAFMGGLPPELATPRRAEPRTAVPARSVGIGGEQTGIYPLVSPGGWQL 181 Query: 184 IGRTGLQLFDPSQQPPTLLRPGDRVRFTVERVAS 217 IGRT L+LFDPS +PPTLLRPGD VRF VE V + Sbjct: 182 IGRTSLELFDPSAEPPTLLRPGDHVRFVVESVQT 215 >ref|ZP_02887185.1| Allophanate hydrolase subunit 1 [Burkholderia graminis C4D1M] gb|EDT07231.1| Allophanate hydrolase subunit 1 [Burkholderia graminis C4D1M] Length = 217 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 138/212 (65%), Positives = 164/212 (77%) Query: 1 MQPPQLHPLGDRALLCSLPPPATLPQQQRIWALATLASEWEEVSEVVPGMNNLTLITKRP 60 M P++ PLGD AL+C PPPATL Q+R+WA A LA +W V EVVPGMNNLTL+ Sbjct: 1 MSQPKIFPLGDAALVCEAPPPATLDCQRRVWAAAELARDWPHVLEVVPGMNNLTLVFDPL 60 Query: 61 VADLDTLTQRVLKSWPKLGTTASEGRTVEIPVVYGGSAGPDLDNVARHTGLSTREVIERH 120 AD + L +R+ ++W G + GR V+IPV YGG GPDL VA HTGLSTREVIERH Sbjct: 61 EADREALAERLQQAWDAAGQAPAAGRDVDIPVQYGGEFGPDLAAVANHTGLSTREVIERH 120 Query: 121 SSAEYVVYFLGFLPGFAYMGGLDASLATPRHTTPRVSIPAGSVGIGGEQTGIYPMASPGG 180 S +YVV+FLGF PGFAYMGGL+A+L TPR +PR+ +PAGSVGIGGEQTGIYP SPGG Sbjct: 121 SGGQYVVFFLGFQPGFAYMGGLEAALHTPRRASPRLEVPAGSVGIGGEQTGIYPATSPGG 180 Query: 181 WQLIGRTGLQLFDPSQQPPTLLRPGDRVRFTV 212 WQLIGRT L LFDP+++PPTLL+PGDRVRFT+ Sbjct: 181 WQLIGRTELPLFDPARRPPTLLQPGDRVRFTI 212