BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2138.p (182 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775174.1| transmembrane protein [Herbaspirillum serope... 285 3e-75 ref|YP_004753713.1| putative transmembrane protein [Collimonas f... 191 3e-47 ref|ZP_04575909.1| conserved hypothetical protein [Oxalobacter f... 147 5e-34 ref|ZP_08272661.1| putative transmembrane protein [Oxalobacterac... 145 2e-33 ref|YP_001100111.1| putative transmembrane protein [Herminiimona... 145 4e-33 >ref|YP_003775174.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ63266.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 177 Score = 285 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 155/177 (87%), Positives = 162/177 (91%), Gaps = 3/177 (1%) Query: 9 MPSPVSLMQRARPRLAAALLAAAALS---GCASLLQPPVQPGEPEDQVVARLGPPTNVYP 65 MPS V L+Q RPRLAAALLA +AL GCASLLQPPVQPGEPEDQVVARLGPPTNVYP Sbjct: 1 MPSFVPLLQSTRPRLAAALLALSALCALSGCASLLQPPVQPGEPEDQVVARLGPPTNVYP 60 Query: 66 DGNGRVFEYAAGAFGQYQYMARIGPDHRLISYEQVWTLQNFHAIRPKQDTKLDVLRRVGR 125 DGN RVFEY AG F QYQYMARIGPDHRLISYEQVWT++NF AIRPKQDTKLDVLRRVGR Sbjct: 61 DGNVRVFEYGAGPFSQYQYMARIGPDHRLISYEQVWTIENFRAIRPKQDTKLDVLRRVGR 120 Query: 126 PTEVTRYARIPFEAWNYGFKESGVWNSQMTVYFNDQGIVEKIENGPDPRFDDSRFRF 182 PTEVTRYARIPFEAWNYG+KESGVWNSQMTVYF DQGIVEK+ENGPDPR+DDSRFRF Sbjct: 121 PTEVTRYARIPFEAWNYGYKESGVWNSQMTVYFTDQGIVEKVENGPDPRYDDSRFRF 177 >ref|YP_004753713.1| putative transmembrane protein [Collimonas fungivorans Ter331] gb|AEK62890.1| putative transmembrane protein [Collimonas fungivorans Ter331] Length = 165 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 91/145 (62%), Positives = 109/145 (75%) Query: 36 CASLLQPPVQPGEPEDQVVARLGPPTNVYPDGNGRVFEYAAGAFGQYQYMARIGPDHRLI 95 CASLL PPV PGEPE QV+ARLG PT Y DGN ++EYA G +GQ YMA+IGPDHRLI Sbjct: 19 CASLLAPPVNPGEPEAQVLARLGNPTGTYQDGNDVLWEYARGPYGQATYMAKIGPDHRLI 78 Query: 96 SYEQVWTLQNFHAIRPKQDTKLDVLRRVGRPTEVTRYARIPFEAWNYGFKESGVWNSQMT 155 SYEQV TL+ F I+ Q + DVLR +G+P E Y R+ WNY +KE+GVWNS+MT Sbjct: 79 SYEQVLTLEKFATIKVGQFNQADVLRTIGKPFETIYYDRVKLNGWNYAYKEAGVWNSEMT 138 Query: 156 VYFNDQGIVEKIENGPDPRFDDSRF 180 VYF+D GIV K+ENGPDPR++ SRF Sbjct: 139 VYFDDSGIVRKLENGPDPRYEHSRF 163 >ref|ZP_04575909.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gb|EEO26871.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 190 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 72/141 (51%), Positives = 90/141 (63%) Query: 35 GCASLLQPPVQPGEPEDQVVARLGPPTNVYPDGNGRVFEYAAGAFGQYQYMARIGPDHRL 94 GCAS+ PP+ PG P +V+AR G P YPDGN ++ E+ AG + QY YMARIGPD RL Sbjct: 18 GCASVFGPPLTPGMPVQEVIARKGAPAIEYPDGNTKILEWPAGEWSQYAYMARIGPDGRL 77 Query: 95 ISYEQVWTLQNFHAIRPKQDTKLDVLRRVGRPTEVTRYARIPFEAWNYGFKESGVWNSQM 154 ISY+ V T + F I+ Q K DVLR VG PTE E W+Y +KE G+WNS M Sbjct: 78 ISYDNVRTREKFATIKVNQFNKNDVLRTVGHPTETEYLPLKKQEVWSYRYKEEGIWNSMM 137 Query: 155 TVYFNDQGIVEKIENGPDPRF 175 +YF+ GIV +ENG DP + Sbjct: 138 HIYFDSSGIVRGMENGQDPLY 158 >ref|ZP_08272661.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33863.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 164 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 79/156 (50%), Positives = 98/156 (62%), Gaps = 2/156 (1%) Query: 27 LLAAAALSG-CASLLQPPVQPGEPEDQVVARLGPPTNVYPDGNGRVFEYAAGAFGQYQYM 85 +L A LSG CA+LL PPV PG E V+ +LG PT+ Y GN + EYA G +GQ +M Sbjct: 8 ILVLALLSGGCAALLAPPVLPGATEAAVLDKLGAPTHRYALGNDHLLEYAKGPWGQRTWM 67 Query: 86 ARIGPDHRLISYEQVWTLQNFHAIRPKQDTKLDVLRRVGRPTEVTRYARIPFEAWNYGFK 145 ARIG D RL+SY QV T F + P K VLR +G P E + RI E W+Y +K Sbjct: 68 ARIGADGRLVSYRQVLTTAMFATLEPGIADKQQVLRTIGAPGEKSSLPRIDMEVWSYAYK 127 Query: 146 ESGVWNSQMTVYFNDQGIVEKIENGPDPRFD-DSRF 180 E VW+S M V+F+ QGIV K++NGPD RFD D RF Sbjct: 128 EQDVWDSMMHVHFDQQGIVRKMQNGPDLRFDPDRRF 163 >ref|YP_001100111.1| putative transmembrane protein [Herminiimonas arsenicoxydans] emb|CAL61986.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 171 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 74/144 (51%), Positives = 94/144 (65%), Gaps = 1/144 (0%) Query: 40 LQPPVQPGEPEDQVVARLGPPTNVYPDGNGRVFEYAAGAFGQYQYMARIGPDHRLISYEQ 99 + PPVQ GE E QV+A+ G PT PD NG + EY +GQ MAR + RL+SYEQ Sbjct: 23 MPPPVQVGETEAQVIAKRGQPTARIPDVNGYLLEYTRNPWGQATDMARFDRNGRLVSYEQ 82 Query: 100 VWTLQNFHAIRPKQDTKLDVLRRVGRPTEVTRYARIPFEAWNYGFKESGVWNSQMTVYFN 159 V T + F I+P TK DVLR +G P+E + R+ E W+Y +KE+GVWNS M V+FN Sbjct: 83 VLTTEKFATIKPGVSTKTDVLRTIGHPSETSYLPRLQLEVWSYPYKEAGVWNSVMHVHFN 142 Query: 160 DQGIVEKIENGPDPRFD-DSRFRF 182 + GIV K+ENGPD RFD D +F F Sbjct: 143 NNGIVNKMENGPDLRFDRDGKFGF 166