BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2129.p (307 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775168.1| sugar kinase,ribokinase family protein [Herb... 459 e-127 ref|YP_004751927.1| 2-dehydro-3-deoxygluconate kinase [Collimona... 411 e-113 ref|YP_298223.1| PfkB [Ralstonia eutropha JMP134] >gi|72121193|g... 371 e-100 ref|YP_586900.1| 2-keto-3-deoxygluconate kinase [Cupriavidus met... 369 e-100 ref|YP_004681379.1| 2-keto-3-deoxygluconate kinase KdgK [Cupriav... 368 e-100 >ref|YP_003775168.1| sugar kinase,ribokinase family protein [Herbaspirillum seropedicae SmR1] gb|ADJ63260.1| sugar kinase,ribokinase family protein [Herbaspirillum seropedicae SmR1] Length = 308 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 258/303 (85%), Positives = 276/303 (91%) Query: 1 MNKPILAYGEAMVEFNQRIDTPRQYLQGFGGDTSNFAIAAARQGAASGYVSAVGDDHFGQ 60 M+K ILAYGEAMVEFNQRID PRQ+LQG+GGDTSNFAIAAARQGAAS Y+SAVGDDHFGQ Sbjct: 1 MSKTILAYGEAMVEFNQRIDAPRQFLQGYGGDTSNFAIAAARQGAASAYLSAVGDDHFGQ 60 Query: 61 DLLALWQREQVDVQHVAVQANGSTGLYFVTHDDQGHHFHYRRAGSAASCYTVGDLPLQAI 120 DLLALWQRE+VDV+HVA+ GSTG+YFVTHD GHHFHYRRAGSAAS Y LPL+AI Sbjct: 61 DLLALWQREEVDVRHVAIAPGGSTGIYFVTHDAAGHHFHYRRAGSAASAYQAKALPLEAI 120 Query: 121 AAAGALHLSGISLAISESACDAGLAAMAHARAAGVTTSLDTNLRLRLWPLERAQAKMAEA 180 AAAGALHLSGISLAISESAC+AGLAAMAHARA+GVTTSLDTNLRLRLWPLERA+A+M EA Sbjct: 121 AAAGALHLSGISLAISESACEAGLAAMAHARASGVTTSLDTNLRLRLWPLERARARMEEA 180 Query: 181 FRLCDVCLPSWEDVSMLTGLNDRDAIVDHLLDYGVKLVAFKLGHEGCYVATRQERRMVSP 240 FRLCD+CLPSWEDVS+LTGL DRDAIVD LL YGVKLVAFKLG EGCYVAT +RRMV+P Sbjct: 181 FRLCDICLPSWEDVSLLTGLEDRDAIVDRLLSYGVKLVAFKLGKEGCYVATSDQRRMVAP 240 Query: 241 YPVQALDATGAGDCFGGAFMAELMAGRDPFQAARYANVAAALSTTGYGAVEPIPHRDLVE 300 YPV +LDATGAGDCFGGAFMAELMAGRD F AARYANVAAALSTTGYGAVEPIP R VE Sbjct: 241 YPVDSLDATGAGDCFGGAFMAELMAGRDAFAAARYANVAAALSTTGYGAVEPIPRRAQVE 300 Query: 301 AAL 303 A L Sbjct: 301 AVL 303 >ref|YP_004751927.1| 2-dehydro-3-deoxygluconate kinase [Collimonas fungivorans Ter331] gb|AEK61104.1| 2-dehydro-3-deoxygluconate kinase [Collimonas fungivorans Ter331] Length = 306 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 225/306 (73%), Positives = 244/306 (79%) Query: 1 MNKPILAYGEAMVEFNQRIDTPRQYLQGFGGDTSNFAIAAARQGAASGYVSAVGDDHFGQ 60 M ILAYGEAMVEFNQR R YLQGFGGDTSNF IAAARQGA SGY+SA+G+DHFGQ Sbjct: 1 MTTDILAYGEAMVEFNQRQHDARMYLQGFGGDTSNFCIAAARQGARSGYISALGNDHFGQ 60 Query: 61 DLLALWQREQVDVQHVAVQANGSTGLYFVTHDDQGHHFHYRRAGSAASCYTVGDLPLQAI 120 L LW EQVD HVA A +TG+YFV+HD GHHF Y RAGSAAS Y LPL AI Sbjct: 61 KLRELWLAEQVDASHVASDAQAATGVYFVSHDQNGHHFDYLRAGSAASRYASAQLPLAAI 120 Query: 121 AAAGALHLSGISLAISESACDAGLAAMAHARAAGVTTSLDTNLRLRLWPLERAQAKMAEA 180 AAA LHLSGISLAIS SACDAGLAAMAHAR GV TSLDTNLRL+LWPLERAQ KM EA Sbjct: 121 AAAKVLHLSGISLAISASACDAGLAAMAHARKHGVRTSLDTNLRLKLWPLERAQEKMREA 180 Query: 181 FRLCDVCLPSWEDVSMLTGLNDRDAIVDHLLDYGVKLVAFKLGHEGCYVATRQERRMVSP 240 F LCD+CLPSW+D+S LTGL+DRDAIVD LL YG+ LVAFKLG EGCYVAT ERR+V Sbjct: 181 FALCDICLPSWDDISALTGLDDRDAIVDTLLSYGIGLVAFKLGAEGCYVATAGERRLVPA 240 Query: 241 YPVQALDATGAGDCFGGAFMAELMAGRDPFQAARYANVAAALSTTGYGAVEPIPHRDLVE 300 Y V+A+DATGAGDCFGGAF+A L AG DPF+AARYANV AALSTTGYGAV PIP VE Sbjct: 241 YGVEAVDATGAGDCFGGAFIARLTAGDDPFRAARYANVCAALSTTGYGAVAPIPRAAQVE 300 Query: 301 AALKAA 306 L ++ Sbjct: 301 EILGSS 306 >ref|YP_298223.1| PfkB [Ralstonia eutropha JMP134] gb|AAZ63379.1| PfkB [Ralstonia eutropha JMP134] Length = 311 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 205/303 (67%), Positives = 235/303 (77%) Query: 1 MNKPILAYGEAMVEFNQRIDTPRQYLQGFGGDTSNFAIAAARQGAASGYVSAVGDDHFGQ 60 M+ ILAYGE +VEFNQ+ D P +YLQGFGGDTSNF IAAARQ A +GY+SAVG D FG+ Sbjct: 1 MSIDILAYGEPLVEFNQQPDDPTRYLQGFGGDTSNFCIAAARQSATTGYISAVGADSFGE 60 Query: 61 DLLALWQREQVDVQHVAVQANGSTGLYFVTHDDQGHHFHYRRAGSAASCYTVGDLPLQAI 120 L+ALW RE+VD +HV V TG+YFV+HD+ GH F Y R GSAAS Y LPL AI Sbjct: 61 RLMALWTRERVDTRHVRVDPVAPTGVYFVSHDNHGHRFDYLREGSAASRYQHEHLPLGAI 120 Query: 121 AAAGALHLSGISLAISESACDAGLAAMAHARAAGVTTSLDTNLRLRLWPLERAQAKMAEA 180 A A LHLSGISLAIS SACDAGLAAM HAR AG SLDTNLRLRLW L RA+ M EA Sbjct: 121 AQASFLHLSGISLAISTSACDAGLAAMEHARKAGTKVSLDTNLRLRLWSLARARGIMREA 180 Query: 181 FRLCDVCLPSWEDVSMLTGLNDRDAIVDHLLDYGVKLVAFKLGHEGCYVATRQERRMVSP 240 F L DVCLPSW+D+++LTGL+DRDAIVD+LL G+ LVA KLG EG YVAT + R +V P Sbjct: 181 FSLTDVCLPSWDDITVLTGLDDRDAIVDYLLGCGIGLVALKLGEEGAYVATPESRTLVQP 240 Query: 241 YPVQALDATGAGDCFGGAFMAELMAGRDPFQAARYANVAAALSTTGYGAVEPIPHRDLVE 300 + V+ +DATGAGDCFGG+F+A L AG DPF+AARYANVAAALSTTGYGAV PIP + V Sbjct: 241 FAVKPVDATGAGDCFGGSFIARLAAGADPFEAARYANVAAALSTTGYGAVAPIPSAETVL 300 Query: 301 AAL 303 A L Sbjct: 301 ARL 303 >ref|YP_586900.1| 2-keto-3-deoxygluconate kinase [Cupriavidus metallidurans CH34] gb|ABF11631.1| 2-Keto-3-deoxygluconate kinase [Cupriavidus metallidurans CH34] Length = 311 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 203/304 (66%), Positives = 240/304 (78%) Query: 1 MNKPILAYGEAMVEFNQRIDTPRQYLQGFGGDTSNFAIAAARQGAASGYVSAVGDDHFGQ 60 M+ ILAYGE ++EFNQ+ D P +YLQGFGGDTSNF IAAARQGA +GY++AVG D FG+ Sbjct: 1 MSIDILAYGEPLIEFNQQPDDPSRYLQGFGGDTSNFCIAAARQGATTGYITAVGADSFGE 60 Query: 61 DLLALWQREQVDVQHVAVQANGSTGLYFVTHDDQGHHFHYRRAGSAASCYTVGDLPLQAI 120 LLALW RE+VD +HV V A+ TG+YFV+HD+ GH F Y R SAAS Y LPL I Sbjct: 61 RLLALWTRERVDTRHVVVNASAPTGVYFVSHDNHGHRFDYLRERSAASRYHHEQLPLATI 120 Query: 121 AAAGALHLSGISLAISESACDAGLAAMAHARAAGVTTSLDTNLRLRLWPLERAQAKMAEA 180 A A LHLSGISLAIS SACDAGLAAM HAR AG SLDTNLRLRLW L RA+ M EA Sbjct: 121 AQARFLHLSGISLAISTSACDAGLAAMEHARKAGAKVSLDTNLRLRLWSLARARGIMREA 180 Query: 181 FRLCDVCLPSWEDVSMLTGLNDRDAIVDHLLDYGVKLVAFKLGHEGCYVATRQERRMVSP 240 F L D+CLPSW+D+++LTGL+DRDAIVD+LL GV+LVA KLG EG Y+AT++ R +V+P Sbjct: 181 FSLTDICLPSWDDITILTGLDDRDAIVDYLLGCGVELVALKLGEEGSYIATQESRALVAP 240 Query: 241 YPVQALDATGAGDCFGGAFMAELMAGRDPFQAARYANVAAALSTTGYGAVEPIPHRDLVE 300 +PV+ +DATGAGDCFGG+F+A L A DPF AARYAN+AAALSTTGYGAV PIPH + V Sbjct: 241 FPVRPVDATGAGDCFGGSFIARLAADADPFDAARYANIAAALSTTGYGAVAPIPHAETVR 300 Query: 301 AALK 304 A L+ Sbjct: 301 ARLE 304 >ref|YP_004681379.1| 2-keto-3-deoxygluconate kinase KdgK [Cupriavidus necator N-1] gb|AEI80147.1| 2-keto-3-deoxygluconate kinase KdgK [Cupriavidus necator N-1] Length = 311 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 201/294 (68%), Positives = 232/294 (78%) Query: 1 MNKPILAYGEAMVEFNQRIDTPRQYLQGFGGDTSNFAIAAARQGAASGYVSAVGDDHFGQ 60 M+ ILAYGE +VEFNQ+ D P +YLQGFGGDTSNF IAAARQGA++GY+ AVG D FG+ Sbjct: 1 MSIDILAYGEPLVEFNQQPDDPSRYLQGFGGDTSNFCIAAARQGASTGYICAVGADTFGE 60 Query: 61 DLLALWQREQVDVQHVAVQANGSTGLYFVTHDDQGHHFHYRRAGSAASCYTVGDLPLQAI 120 L ALW +E+VD +HV V + TG+YFV+HD+ GH F Y R GSAAS Y LPL AI Sbjct: 61 RLRALWTQERVDTRHVRVDPSAPTGVYFVSHDNHGHRFDYLREGSAASRYQHEHLPLGAI 120 Query: 121 AAAGALHLSGISLAISESACDAGLAAMAHARAAGVTTSLDTNLRLRLWPLERAQAKMAEA 180 AAA LHLSGISLAIS SACDAGL AM HAR AG +LDTNLRLRLW L RA+ M EA Sbjct: 121 AAARYLHLSGISLAISTSACDAGLDAMEHARKAGTKVTLDTNLRLRLWSLARARGIMREA 180 Query: 181 FRLCDVCLPSWEDVSMLTGLNDRDAIVDHLLDYGVKLVAFKLGHEGCYVATRQERRMVSP 240 L DVCLPSW+D+++LTGL+DRDAIVD+LL G+ LVA KLG EG YVAT + R +V P Sbjct: 181 LMLTDVCLPSWDDITVLTGLDDRDAIVDYLLGCGIGLVALKLGEEGSYVATPESRALVPP 240 Query: 241 YPVQALDATGAGDCFGGAFMAELMAGRDPFQAARYANVAAALSTTGYGAVEPIP 294 YPV+ +DATGAGDCFGG+F+A L AG DPF+AARYANVAAALSTTGYGAV PIP Sbjct: 241 YPVKPIDATGAGDCFGGSFVARLAAGADPFEAARYANVAAALSTTGYGAVAPIP 294