BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2123.p (259 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775164.1| hypothetical protein Hsero_1743 [Herbaspiril... 298 4e-79 ref|YP_004688423.1| hypothetical protein CNE_BB1p09740 [Cupriavi... 168 7e-40 ref|ZP_06916585.1| aminoglycoside phosphotransferase [Streptomyc... 109 5e-22 ref|ZP_07303260.1| aminoglycoside phosphotransferase [Streptomyc... 104 1e-20 gb|ADI08660.1| hypothetical protein SBI_05540 [Streptomyces bing... 104 1e-20 >ref|YP_003775164.1| hypothetical protein Hsero_1743 [Herbaspirillum seropedicae SmR1] gb|ADJ63256.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 238 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 180/224 (80%), Positives = 190/224 (84%) Query: 36 ALAAGAETLAADILRSAPGQPVHTLVLHGAGQGDRQRQWPLRQALAARGSASAAIDFSGH 95 ALA GAETLAAD+L V TLVLHGAGQGDRQRQWPLRQALA RG ASAAIDFSGH Sbjct: 14 ALAVGAETLAADLLHGPASATVQTLVLHGAGQGDRQRQWPLRQALALRGCASAAIDFSGH 73 Query: 96 GQSSALLHNSLSKRLDEAQAALDRLTVSPRTVVGVSMSGEIALRLACQPENRITHVVTLV 155 GQSSA NSL+KRL EAQAALD LTV+PRTVVGVSMSGEIALRLAC+PENRI HVVTLV Sbjct: 74 GQSSARQPNSLAKRLAEAQAALDALTVAPRTVVGVSMSGEIALRLACRPENRIAHVVTLV 133 Query: 156 GALYDGAAFMLPFGPAFSAALRRPHSWRDAEVLQMIRAYRGRLTIIRASEDAVIPAEIAE 215 GALYDGAAF LPFGPAFSAALRRP SWRDA VL +IR Y GRLT+IRASEDAVIPAE+AE Sbjct: 134 GALYDGAAFELPFGPAFSAALRRPGSWRDATVLALIRRYPGRLTLIRASEDAVIPAEVAE 193 Query: 216 LIRQHASPASDCRIVDLPGMDHRVSERSAQDAALCAQLAALITD 259 LIR HA AS CRIVDLPG+DHRVSERS DA L +LA LI + Sbjct: 194 LIRAHAVAASACRIVDLPGVDHRVSERSQHDALLRERLADLILE 237 >ref|YP_004688423.1| hypothetical protein CNE_BB1p09740 [Cupriavidus necator N-1] gb|AEI82385.1| hypothetical protein CNE_BB1p09740 [Cupriavidus necator N-1] Length = 245 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 100/209 (47%), Positives = 129/209 (61%), Gaps = 3/209 (1%) Query: 33 EELALAAGAETLAADILRSAPGQPVHTLVLHGAGQGDRQRQWPLRQALAARGSASAAIDF 92 E + G ETLAAD R A V L+LHGAG R R PLR ALA G + AIDF Sbjct: 5 ETFTIDTGTETLAAD--RIAVRGKVQCLLLHGAGMSTRVRWLPLRTALAQHGVGTVAIDF 62 Query: 93 SGHGQSSALLHNSLSKRLDEAQAALDRLTVS-PRTVVGVSMSGEIALRLACQPENRITHV 151 SGHG SS+ SL KR DEA AL+ + PR VVG+SMSGEIA+RLA I+ V Sbjct: 63 SGHGDSSSRTEGSLEKRFDEALLALEHIDADGPRVVVGISMSGEIAVRLAVDKATHISGV 122 Query: 152 VTLVGALYDGAAFMLPFGPAFSAALRRPHSWRDAEVLQMIRAYRGRLTIIRASEDAVIPA 211 VT+VGA YD AA+ +PFGP F+ LR SWR +EV I+++RGR+ +I+A D V+P Sbjct: 123 VTIVGAAYDPAAYQIPFGPEFTRILRSHESWRKSEVFSAIQSFRGRIAVIQAGNDEVVPG 182 Query: 212 EIAELIRQHASPASDCRIVDLPGMDHRVS 240 I + ++AS A ++ LPG+ H ++ Sbjct: 183 MIGSDLIRNASCAEHAELLVLPGVSHALA 211 >ref|ZP_06916585.1| aminoglycoside phosphotransferase [Streptomyces sviceus ATCC 29083] gb|EDY59125.1| aminoglycoside phosphotransferase [Streptomyces sviceus ATCC 29083] Length = 543 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 102/187 (54%), Gaps = 6/187 (3%) Query: 60 LVLHGAGQGDRQRQWPLRQALAARGSASAAIDFSGHGQSSA-LLHNSLSKRLDEAQAALD 118 ++LHGAG ++R PL A G + A DFSGHG+SS L SL +R ++A A +D Sbjct: 31 VLLHGAGHAAKERLLPLLDEFVAHGCRALAFDFSGHGESSGDLAELSLRRRFEQAVAVID 90 Query: 119 RLTVS--PRTVVGVSMSGEIALRLACQPENRITHVVTLVGALYDGAAFMLPFGPA---FS 173 P +VG SMSG+ LA R+ + A+Y G A+ LPFG FS Sbjct: 91 AHVPGDGPLVLVGFSMSGQTVADLARHYGERVAALGLCAPAVYAGEAWGLPFGRGDGEFS 150 Query: 174 AALRRPHSWRDAEVLQMIRAYRGRLTIIRASEDAVIPAEIAELIRQHASPASDCRIVDLP 233 +RRP SWR + L+ +RAY GR + DAVIP E+ E++++ + S ++LP Sbjct: 151 EIIRRPDSWRHSPALEALRAYEGRAVLAVPGTDAVIPPEVTEVVQEALTFRSQFTRLELP 210 Query: 234 GMDHRVS 240 +H+++ Sbjct: 211 HSEHQLA 217 >ref|ZP_07303260.1| aminoglycoside phosphotransferase [Streptomyces viridochromogenes DSM 40736] gb|EFL31629.1| aminoglycoside phosphotransferase [Streptomyces viridochromogenes DSM 40736] Length = 543 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 101/196 (51%), Gaps = 6/196 (3%) Query: 50 RSAPGQPVHTLVLHGAGQGDRQRQWPLRQALAARGSASAAIDFSGHGQSSALLHN-SLSK 108 R+ ++LHGAG G ++R PL AA G + A DFSGHG+S+ LL SL + Sbjct: 21 RAGEAARATVVLLHGAGNGSKERLVPLLSEFAAHGCRTLAFDFSGHGESTGLLSELSLRR 80 Query: 109 RLDEAQAALD-RLTV-SPRTVVGVSMSGEIALRLACQPENRITHVVTLVGALYDGAAFML 166 R D+A + +D R V P +VG SMSG+ L R+ + A+Y A+ + Sbjct: 81 RFDQAVSVIDARAGVDEPLVLVGFSMSGQTVADLVRHYGERVEALGLCAPAVYAAQAWDV 140 Query: 167 PFGPA---FSAALRRPHSWRDAEVLQMIRAYRGRLTIIRASEDAVIPAEIAELIRQHASP 223 PFG FS +RRP SWR + L ++RAY GR + D VIP + E + + + Sbjct: 141 PFGAGDGRFSEVIRRPGSWRTSPALDVLRAYEGRAVLAVPGTDEVIPPAVTEAVSEALAR 200 Query: 224 ASDCRIVDLPGMDHRV 239 + +LP +HR+ Sbjct: 201 RAQFTHWELPEAEHRL 216 >gb|ADI08660.1| hypothetical protein SBI_05540 [Streptomyces bingchenggensis BCW-1] Length = 246 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 98/210 (46%), Gaps = 3/210 (1%) Query: 52 APGQPVHTLVLHGAGQGDRQRQWPLRQALAARGSASAAIDFSGHGQSSALLHN-SLSKRL 110 P +++HGAG G ++R PL + AA G S A DFSGHG SS L SL +R Sbjct: 24 GPASSTRVVIMHGAGIGSKERSIPLARDFAAAGHPSLAFDFSGHGDSSGKLEELSLERRF 83 Query: 111 DEAQAALDRLTVS--PRTVVGVSMSGEIALRLACQPENRITHVVTLVGALYDGAAFMLPF 168 +A ++ P +VG SMSG+ L R + A Y A+ +PF Sbjct: 84 RQALGVIEAFAPDGGPLALVGFSMSGQTVADLTAHLGGRAEAICLCAPAAYGPEAWPVPF 143 Query: 169 GPAFSAALRRPHSWRDAEVLQMIRAYRGRLTIIRASEDAVIPAEIAELIRQHASPASDCR 228 G F+ +RRP SWR + V ++ A+ GR ++ D VIP E+ I Q S Sbjct: 144 GDGFTELIRRPESWRPSTVFDVLGAFTGRSVLVVPERDEVIPPEVTAGIEQALRTKSRFS 203 Query: 229 IVDLPGMDHRVSERSAQDAALCAQLAALIT 258 V L G DH++ + A+L L T Sbjct: 204 KVVLDGADHQLGRWLSDHPEHRARLVDLCT 233