BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2106.p (255 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775149.1| hypothetical protein Hsero_1728 [Herbaspiril... 461 e-128 ref|YP_003048111.1| hypothetical protein Mmol_0674 [Methylotener... 325 5e-87 ref|YP_001100443.1| hypothetical protein HEAR2184 [Herminiimonas... 324 6e-87 ref|YP_001352964.1| hypothetical protein mma_1274 [Janthinobacte... 324 7e-87 ref|YP_003051983.1| hypothetical protein Msip34_2214 [Methylovor... 318 4e-85 >ref|YP_003775149.1| hypothetical protein Hsero_1728 [Herbaspirillum seropedicae SmR1] gb|ADJ63241.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 281 Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 232/253 (91%), Positives = 240/253 (94%) Query: 3 PAVKCSSVRALRAAWQAGQLALETDDLAAAESGSGIPGRPARPELVSPLQVKHRSMGTPE 62 PA KCS+VRALRAAWQ G+L LET+DLA E GSGIPGRP RPELVSPLQVKHRSMGTPE Sbjct: 29 PAAKCSAVRALRAAWQQGRLPLETEDLAVTEPGSGIPGRPERPELVSPLQVKHRSMGTPE 88 Query: 63 GRAALIHALAHIEFNAINLALDAVWRFAGMPREFYDDWLQVADEEAYHFSLLADHLKTLG 122 GRAALIHALAHIEFNAINLALDAVWRFAGMPR+FY DWLQVADEEAYHF LLADHL TLG Sbjct: 89 GRAALIHALAHIEFNAINLALDAVWRFAGMPRDFYVDWLQVADEEAYHFRLLADHLSTLG 148 Query: 123 HDYGDFTAHNALWDMAESTKDDVLARIALVPRTLEARGLDAAPPVRAKLAQAGDLAAAEI 182 H YGDFTAHNALWDMAESTK DVLARIALVPRTLEARGLDAAPPVRAKLAQAGDLAAAEI Sbjct: 149 HAYGDFTAHNALWDMAESTKGDVLARIALVPRTLEARGLDAAPPVRAKLAQAGDLAAAEI 208 Query: 183 LDIIMRDEVGHVLIGNRWFNWLCEQRQLDPVTTFAELCQRHRAPPLRGPFNLEARRAAGF 242 LDIIMRDEVGHVLIGNRWFNWLCEQRQLDPV TFA+LCQRH+APPLRGPFNLEARRAAGF Sbjct: 209 LDIIMRDEVGHVLIGNRWFNWLCEQRQLDPVATFAQLCQRHKAPPLRGPFNLEARRAAGF 268 Query: 243 SDEEMLMFSDVSR 255 SDEEMLMF+D+SR Sbjct: 269 SDEEMLMFTDISR 281 >ref|YP_003048111.1| hypothetical protein Mmol_0674 [Methylotenera mobilis JLW8] gb|ACT47584.1| protein of unknown function DUF455 [Methylotenera mobilis JLW8] Length = 262 Score = 325 bits (832), Expect = 5e-87, Method: Composition-based stats. Identities = 161/245 (65%), Positives = 193/245 (78%), Gaps = 2/245 (0%) Query: 6 KCSSVRALRAAWQAGQLALETDDLAAAESGSGIPGRPARPELVSPLQVKHRSMGTPEGRA 65 K S+V AL +WQ+G L L D+ S IPGRP RP LVSPL+V RSM T EGRA Sbjct: 20 KTSAVTALYQSWQSGTLLL--DNERELVSTQPIPGRPERPLLVSPLEVGKRSMRTEEGRA 77 Query: 66 ALIHALAHIEFNAINLALDAVWRFAGMPREFYDDWLQVADEEAYHFSLLADHLKTLGHDY 125 LIHALAHIEFNAINLALDAVWRFAGMP+++Y DWL+VA EEAYHF LL HL+TLG+ Y Sbjct: 78 GLIHALAHIEFNAINLALDAVWRFAGMPQQYYVDWLKVAAEEAYHFGLLNAHLETLGYQY 137 Query: 126 GDFTAHNALWDMAESTKDDVLARIALVPRTLEARGLDAAPPVRAKLAQAGDLAAAEILDI 185 GD T HN+LW+M E T+DDVLAR+ALVPRT+EARGLDA+P +R K AQ GD+A A ILDI Sbjct: 138 GDLTGHNSLWEMVERTQDDVLARMALVPRTMEARGLDASPALRNKFAQIGDVAMAGILDI 197 Query: 186 IMRDEVGHVLIGNRWFNWLCEQRQLDPVTTFAELCQRHRAPPLRGPFNLEARRAAGFSDE 245 I+RDE+GHV IGN WFNWLC QR+L+P+ T+A L +++ AP LR PFNLEARR AGF++ Sbjct: 198 ILRDEIGHVAIGNVWFNWLCTQRELEPIATYAALAEQYSAPTLRKPFNLEARRQAGFTEA 257 Query: 246 EMLMF 250 E+ + Sbjct: 258 ELALL 262 >ref|YP_001100443.1| hypothetical protein HEAR2184 [Herminiimonas arsenicoxydans] emb|CAL62320.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 279 Score = 324 bits (831), Expect = 6e-87, Method: Composition-based stats. Identities = 168/245 (68%), Positives = 196/245 (80%), Gaps = 2/245 (0%) Query: 3 PAVKCSSVRALRAAWQAGQLALETDDLAAAESGSGIPGRPARPELVSPLQVKHRSMGTPE 62 PA K V A+ AW+A L L+T L + IPGRPA PEL+SP VKHRSM T E Sbjct: 29 PACKADGVIAMADAWRAQTLRLDT--LGVLLAQQAIPGRPAVPELISPKFVKHRSMRTVE 86 Query: 63 GRAALIHALAHIEFNAINLALDAVWRFAGMPREFYDDWLQVADEEAYHFSLLADHLKTLG 122 GRAA+IHAL HIEFNAINLALDAVWRFAGMP +Y DWLQVA EEA HFSLL+ HL+TLG Sbjct: 87 GRAAMIHALTHIEFNAINLALDAVWRFAGMPAAYYADWLQVAAEEALHFSLLSAHLQTLG 146 Query: 123 HDYGDFTAHNALWDMAESTKDDVLARIALVPRTLEARGLDAAPPVRAKLAQAGDLAAAEI 182 + YGDF AHN++W+MAE T+DD+LAR+ALVPRTLEARGLDA P RAKLAQAGD AAAEI Sbjct: 147 YQYGDFPAHNSMWEMAEKTRDDILARMALVPRTLEARGLDATPLTRAKLAQAGDQAAAEI 206 Query: 183 LDIIMRDEVGHVLIGNRWFNWLCEQRQLDPVTTFAELCQRHRAPPLRGPFNLEARRAAGF 242 LDII+RDE+GHV IGNRW+N LC LDP+ T+AEL +++AP LRGPFN++ARRAAGF Sbjct: 207 LDIILRDEIGHVAIGNRWYNMLCHLHGLDPILTYAELSLQYKAPVLRGPFNMQARRAAGF 266 Query: 243 SDEEM 247 S+ E+ Sbjct: 267 SELEL 271 >ref|YP_001352964.1| hypothetical protein mma_1274 [Janthinobacterium sp. Marseille] gb|ABR89741.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 277 Score = 324 bits (831), Expect = 7e-87, Method: Composition-based stats. Identities = 166/244 (68%), Positives = 199/244 (81%), Gaps = 2/244 (0%) Query: 4 AVKCSSVRALRAAWQAGQLALETDDLAAAESGSGIPGRPARPELVSPLQVKHRSMGTPEG 63 A+K + V L +W AGQL+L+TD A+ ++ + IPGRPA PEL+SP VKHRSM T EG Sbjct: 28 ALKAAGVIELAKSWHAGQLSLDTD--ASLQAQTAIPGRPALPELISPKFVKHRSMRTDEG 85 Query: 64 RAALIHALAHIEFNAINLALDAVWRFAGMPREFYDDWLQVADEEAYHFSLLADHLKTLGH 123 RAALIHAL HIEFNAINLALDA+WRFAGMP +Y DWLQVA EEA H+SLLA HL+ LGH Sbjct: 86 RAALIHALTHIEFNAINLALDAIWRFAGMPSAYYADWLQVAGEEALHYSLLAGHLQVLGH 145 Query: 124 DYGDFTAHNALWDMAESTKDDVLARIALVPRTLEARGLDAAPPVRAKLAQAGDLAAAEIL 183 YGDF AHN++W+MA+ T D+LAR+ALVPRTLEARGLDA P RAKLAQAGD AAAEIL Sbjct: 146 RYGDFAAHNSMWEMADKTSGDILARMALVPRTLEARGLDATPLTRAKLAQAGDQAAAEIL 205 Query: 184 DIIMRDEVGHVLIGNRWFNWLCEQRQLDPVTTFAELCQRHRAPPLRGPFNLEARRAAGFS 243 DII+RDE+GHV IGN W+ LC++R LDP+TT+A+L ++ P LRGPFNL+ARRAAGFS Sbjct: 206 DIILRDEIGHVAIGNHWYKVLCDERGLDPLTTYADLALHYKVPVLRGPFNLDARRAAGFS 265 Query: 244 DEEM 247 + E+ Sbjct: 266 EPEL 269 >ref|YP_003051983.1| hypothetical protein Msip34_2214 [Methylovorus glucosetrophus SIP3-4] gb|ACT51456.1| protein of unknown function DUF455 [Methylovorus glucosetrophus SIP3-4] Length = 294 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 174/248 (70%), Positives = 200/248 (80%), Gaps = 3/248 (1%) Query: 3 PAVKCSSVRALRAAWQAGQLALE-TDDLAAAESGSG--IPGRPARPELVSPLQVKHRSMG 59 P+ K + V L A+Q G++ L+ T DL A SG IPGRP +PELVSPL VK R+M Sbjct: 38 PSRKVAGVTDLYRAYQRGEVLLDGTVDLRTATPASGLSIPGRPQQPELVSPLAVKRRNMR 97 Query: 60 TPEGRAALIHALAHIEFNAINLALDAVWRFAGMPREFYDDWLQVADEEAYHFSLLADHLK 119 T EGRAALIHALAHIEFNAINLALD +WRF GMP FY DWLQVA EEA HFSLL HL Sbjct: 98 TVEGRAALIHALAHIEFNAINLALDVIWRFPGMPDAFYADWLQVAQEEALHFSLLQQHLV 157 Query: 120 TLGHDYGDFTAHNALWDMAESTKDDVLARIALVPRTLEARGLDAAPPVRAKLAQAGDLAA 179 TLG+ YGDFTAHN+LW+MA T+ D+LARIALVPRT+EARGLDA+PP+RAKLAQAGD+AA Sbjct: 158 TLGYCYGDFTAHNSLWEMATRTEHDILARIALVPRTMEARGLDASPPLRAKLAQAGDMAA 217 Query: 180 AEILDIIMRDEVGHVLIGNRWFNWLCEQRQLDPVTTFAELCQRHRAPPLRGPFNLEARRA 239 A ILDII+RDE+GHV IGNRWF WLCEQ L+P+ T+AEL R+ AP LRGPFN+EARRA Sbjct: 218 AAILDIILRDEIGHVAIGNRWFGWLCEQGNLEPLATYAELAARYSAPTLRGPFNMEARRA 277 Query: 240 AGFSDEEM 247 AGFSD E+ Sbjct: 278 AGFSDAEL 285