BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2087.p (404 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004753453.1| hypothetical protein CFU_2804 [Collimonas fu... 558 e-157 ref|ZP_04946149.1| hypothetical protein BDAG_02075 [Burkholderia... 496 e-138 ref|YP_001062689.1| hypothetical protein BURPS668_A1694 [Burkhol... 468 e-130 ref|ZP_04898578.1| conserved hypothetical protein [Burkholderia ... 467 e-129 ref|YP_001074145.1| hypothetical protein BURPS1106A_A0102 [Burkh... 467 e-129 >ref|YP_004753453.1| hypothetical protein CFU_2804 [Collimonas fungivorans Ter331] gb|AEK62630.1| hypothetical protein CFU_2804 [Collimonas fungivorans Ter331] Length = 556 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 289/404 (71%), Positives = 336/404 (83%) Query: 1 MKPRIWPYAAAFLVGVFLWTGYIMNDSYHYWQTTGQEMMDMGSSIRNGILAVLGIAVLAY 60 M+PRIWPYAA FL+ +WT Y+M +YH+WQ TGQE M MGSSIRNG+LA LGIA+LAY Sbjct: 1 MRPRIWPYAAGFLLVAIIWTVYVMVGNYHHWQATGQETMYMGSSIRNGVLAALGIALLAY 60 Query: 61 GGSWAWMLRSSGEITEVASKEQAAPVALESNLAKSHAMLAQTGKKFVLEVRGMGVAVAKK 120 GGS AWM RSS + +S++QAA A+ S+L + AMLAQTGKKF LEVRGMGV V + Sbjct: 61 GGSLAWMHRSSNASADSSSQKQAASAAVVSSLPGAQAMLAQTGKKFALEVRGMGVVVGEN 120 Query: 121 TDEEIWEAIEEKADNHATYFSQNPEDYTDSADQRLSDLGVATRLPFKEAAGRAVDQWPLP 180 TDEEIW+AIE+KADN+A+Y SQNPEDYT+SA QR+SDLG T L FK A AV+QWPLP Sbjct: 121 TDEEIWQAIEKKADNYASYVSQNPEDYTNSAGQRVSDLGAVTGLSFKRGARHAVEQWPLP 180 Query: 181 VIIWYPPKSKRTSRPAGDLAGIRQMAGLGVTLLLWQEDANTEDGAAMIERLFTFFDTHPD 240 VI+W PPK+KR SRPA LAG RQ A LGVTLLLWQEDANT+DGAAMIE+LF FFDTHPD Sbjct: 181 VILWEPPKAKRASRPASSLAGWRQQASLGVTLLLWQEDANTDDGAAMIEKLFAFFDTHPD 240 Query: 241 VPAALIFSTDGSMMRSLMQTPGNVDTPEVGHVIPAMPDSVAAFLVTRSDRVDKLIRPYVV 300 VPAALIFSTDGSM RSL++TPGNVDTPEVGHVIPAMPDSV AFLV+RSDRVDKLIRP+ V Sbjct: 241 VPAALIFSTDGSMTRSLIETPGNVDTPEVGHVIPAMPDSVGAFLVSRSDRVDKLIRPFAV 300 Query: 301 QQRSNVNKNDTEFDIVKLWNFYWKKTEDRSPDGFNTHYLKEEKEAGVGSPAMSLMSASWW 360 Q +N+NK +TE+D+VKLWNF+WKK +DRSP+ F H+ E+K AGV S + MS+SWW Sbjct: 301 AQTANINKTNTEYDVVKLWNFFWKKNDDRSPESFEAHFRAEQKAAGVTSTSSGTMSSSWW 360 Query: 361 QGQLPELWKNTTNQGPGDFKPTPYIPVRWTNWQLKQYDSAPLLG 404 Q QLPELW+ NQGPG+FKPTPYIPVRWT+WQLKQ+DSAPLLG Sbjct: 361 QAQLPELWQTIGNQGPGEFKPTPYIPVRWTDWQLKQFDSAPLLG 404 >ref|ZP_04946149.1| hypothetical protein BDAG_02075 [Burkholderia dolosa AUO158] gb|EAY69320.1| hypothetical protein BDAG_02075 [Burkholderia dolosa AUO158] Length = 564 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 238/411 (57%), Positives = 303/411 (73%), Gaps = 10/411 (2%) Query: 2 KPRIWPYAAAFLVGVFLWTGYIMNDSYHYWQTTGQEMMDMGSSIRNGILAVLGIAVLAYG 61 +PRIWPYA+AF+V +WT +M Y YWQTTGQEM MGSSIRNG+L +L + LAYG Sbjct: 4 RPRIWPYASAFVVVAIIWTILVMARHYSYWQTTGQEMPHMGSSIRNGVLVILALVALAYG 63 Query: 62 GSWAWMLRSSGEITEVASKEQAAPVALESNLAKSHA------MLAQTGKKFVLEVRGMGV 115 S AW+ RS ++ A+ +++ P S + SH ML+ TG+K+VLEVRG+G+ Sbjct: 64 ASVAWLHRS--QVPATAASDRSIPADQRSEVVVSHGFNGSSTMLSLTGQKYVLEVRGLGI 121 Query: 116 AVAKKTDEEIWEAIEEKADNHATYFSQNPEDYTDSADQRLSDLGVATRLPFKEAAGRAVD 175 T++EIW+ IE KADNHATYFSQNPEDY DS D R DL ++T FK A RAV+ Sbjct: 122 VTGWDTNQEIWKKIEAKADNHATYFSQNPEDYPDSEDTRQQDLEISTGTGFKAGASRAVE 181 Query: 176 QWPLPVIIWYPPKSKRTS-RPAGDLAGIRQMAGLGVTLLLWQEDANTEDGAAMIERLFTF 234 WP+PVIIW PPK KR + R A D+AG+RQ A LGVTL LWQEDANT DGA MI++LF F Sbjct: 182 YWPVPVIIWGPPKDKRNAFRAAADIAGLRQQASLGVTLFLWQEDANTADGAGMIDKLFAF 241 Query: 235 FDTHPDVPAALIFSTDGSMMRSLMQTPGNVDTPEVGHVIPAMPDSVAAFLVTRSDRVDKL 294 FD HPDVPAAL+FS DGS+ RSL+ PG+ P GH+IP +PDSV A LV+RSDRVDKL Sbjct: 242 FDEHPDVPAALVFSADGSLTRSLLGAPGSGSAPRAGHIIPELPDSVGAILVSRSDRVDKL 301 Query: 295 IRPYVVQQRSNVNKNDTEFDIVKLWNFYWKKTEDRSPDGFNTHYLKEEKEAGVGSP-AMS 353 IRPY V+Q + +N+N+TE+D++KLWNF+W++ +DR PD F H++++ K+AGV P A+ Sbjct: 302 IRPYAVEQTAQINRNNTEYDVIKLWNFFWEQNDDRGPDSFTAHFIEQAKQAGVQYPVAIG 361 Query: 354 LMSASWWQGQLPELWKNTTNQGPGDFKPTPYIPVRWTNWQLKQYDSAPLLG 404 +MS++WWQ +LP WK N+GPG F PTPYIPVRWT WQ+KQ+D APLLG Sbjct: 362 VMSSTWWQAKLPAFWKTIDNKGPGQFTPTPYIPVRWTTWQVKQFDDAPLLG 412 >ref|YP_001062689.1| hypothetical protein BURPS668_A1694 [Burkholderia pseudomallei 668] gb|ABN86419.1| conserved hypothetical protein [Burkholderia pseudomallei 668] Length = 552 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 224/411 (54%), Positives = 299/411 (72%), Gaps = 10/411 (2%) Query: 1 MKPRIWPYAAAFLVGVFLWTGYIMNDSYHYWQTTGQEMMDMGSSIRNGILAVLGIAVLAY 60 MKPRIWP+AA F++ WT +M YHYWQ TGQEM M +SIRNG+L LG+ + Sbjct: 1 MKPRIWPFAAVFVLIALGWTFVVMAQHYHYWQATGQEMPGMAASIRNGVLVALGVVAAVF 60 Query: 61 GGSWAWMLRSSGEITEVASKEQAAPVALESNLAKSH------AMLAQTGKKFVLEVRGMG 114 S+ W+ R+ E T + +A AL+++ A ++ A+L QTG +VLEVRG+G Sbjct: 61 TASYVWLHRAPHEST--PATMSSASAALDTHAATNYGNNGVPALLGQTGANYVLEVRGLG 118 Query: 115 VAVAKKTDEEIWEAIEEKADNHATYFSQNPEDYTDSADQRLSDLGVATRLPFKEAAGRAV 174 + +T+EEIW+AI+ KADNH+TY SQNP DY + D+R++DLG++TR+ FK A +V Sbjct: 119 LVTGHETNEEIWKAIQAKADNHSTYMSQNPADYPANKDERMTDLGLSTRISFKFGARNSV 178 Query: 175 DQWPLPVIIWYPPKSKRTSRPAGDLAGIRQMAGLGVTLLLWQEDANTEDGAAMIERLFTF 234 + WP+PV IW PPK +R RP L GIRQ A LGVTLLLWQEDANT+DGA++IE+LF F Sbjct: 179 EYWPVPVFIWEPPKDRRFGRPGAALDGIRQEASLGVTLLLWQEDANTDDGASIIEKLFAF 238 Query: 235 FDTHPDVPAALIFSTDGSMMRSLMQTPGNVDTPEVGHVIPAMPDSVAAFLVTRSDRVDKL 294 FD+HPDVP A+I++ DGSM R L +TPG +DT E + IP+MPDS+ A LV+RSDRVD+L Sbjct: 239 FDSHPDVPEAVIYTLDGSMKRWLNETPGYIDTFEQSN-IPSMPDSMVAMLVSRSDRVDRL 297 Query: 295 IRPYVVQQRSNVNKNDTEFDIVKLWNFYWKKTEDRSPDGFNTHYLKEEKEAGVGSP-AMS 353 IRPY V+Q NVN T++DI +LWNF+WK +DR PD F HY +EK AGV +P + Sbjct: 298 IRPYAVEQTENVNNGTTDYDITRLWNFFWKVNQDRGPDSFTAHYEADEKRAGVNTPMSAG 357 Query: 354 LMSASWWQGQLPELWKNTTNQGPGDFKPTPYIPVRWTNWQLKQYDSAPLLG 404 ++++WWQ +LP+ WK +N+GPG+FKPTPYIPVRWT WQ++Q+D+APLLG Sbjct: 358 FVTSAWWQTKLPDFWKTISNKGPGEFKPTPYIPVRWTTWQVRQFDNAPLLG 408 >ref|ZP_04898578.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur 52237] gb|EDO95472.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur 52237] Length = 552 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 224/409 (54%), Positives = 295/409 (72%), Gaps = 6/409 (1%) Query: 1 MKPRIWPYAAAFLVGVFLWTGYIMNDSYHYWQTTGQEMMDMGSSIRNGILAVLGIAVLAY 60 MKPRIWP+AA F++ WT +M YHYWQ TGQEM M +SIRNG+L LG+ + Sbjct: 1 MKPRIWPFAAVFVLIALGWTFVVMAQHYHYWQATGQEMPGMAASIRNGVLVALGVVAAVF 60 Query: 61 GGSWAWMLRSSGEITEVASKEQAAPVALESNLAKSH----AMLAQTGKKFVLEVRGMGVA 116 S+ W+ R+ E T +A + + + +++ A+LAQTG+KFVLEVRG+G+ Sbjct: 61 TASYVWLHRAPHESTPATMSSASAALDTHAAVTRANDGVPALLAQTGEKFVLEVRGLGLV 120 Query: 117 VAKKTDEEIWEAIEEKADNHATYFSQNPEDYTDSADQRLSDLGVATRLPFKEAAGRAVDQ 176 + ++EIW AI+ KA+NH+TY SQNP DY D+ D R++ LGVAT L F+ AA +V+ Sbjct: 121 TGRNANDEIWRAIDAKANNHSTYMSQNPTDYPDNKDSRMTYLGVATGLAFQLAARHSVEY 180 Query: 177 WPLPVIIWYPPKSKRTSRPAGDLAGIRQMAGLGVTLLLWQEDANTEDGAAMIERLFTFFD 236 WP+PV IW PPK +R RP L GIRQ A LGVTLLLWQEDANT+DGA++IE+LF FFD Sbjct: 181 WPVPVFIWEPPKDRRFGRPGAALDGIRQEASLGVTLLLWQEDANTDDGASIIEKLFAFFD 240 Query: 237 THPDVPAALIFSTDGSMMRSLMQTPGNVDTPEVGHVIPAMPDSVAAFLVTRSDRVDKLIR 296 HPDVP A+I++ DGSM R L +TPG +DT E + IP+MPDS+ A LV+RSDRVD+LIR Sbjct: 241 AHPDVPEAVIYTLDGSMKRWLNETPGYIDTFEQSN-IPSMPDSMVAMLVSRSDRVDRLIR 299 Query: 297 PYVVQQRSNVNKNDTEFDIVKLWNFYWKKTEDRSPDGFNTHYLKEEKEAGVGSP-AMSLM 355 PY V+Q NVN T++DI +LWNF+WK +DR PD F HY +EK AGV +P + + Sbjct: 300 PYAVEQTENVNNGTTDYDITRLWNFFWKVNQDRGPDSFTAHYEADEKRAGVNTPMSAGFV 359 Query: 356 SASWWQGQLPELWKNTTNQGPGDFKPTPYIPVRWTNWQLKQYDSAPLLG 404 +++WWQ +LP+ WK +N+GPG+FKPTPYIPVRWT WQ+KQ+D+APLLG Sbjct: 360 TSAWWQTKLPDFWKTISNKGPGEFKPTPYIPVRWTTWQVKQFDNAPLLG 408 >ref|YP_001074145.1| hypothetical protein BURPS1106A_A0102 [Burkholderia pseudomallei 1106a] ref|ZP_04813088.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b] gb|ABN95437.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a] gb|EES23713.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b] Length = 552 Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats. Identities = 224/411 (54%), Positives = 299/411 (72%), Gaps = 10/411 (2%) Query: 1 MKPRIWPYAAAFLVGVFLWTGYIMNDSYHYWQTTGQEMMDMGSSIRNGILAVLGIAVLAY 60 MKPRIWP+AA F++ WT +M YHYWQ TGQEM M +SIRNG+L LG+ + Sbjct: 1 MKPRIWPFAAVFVLIALGWTFVVMAQHYHYWQATGQEMPGMAASIRNGVLVALGVVAAVF 60 Query: 61 GGSWAWMLRSSGEITEVASKEQAAPVALESNLAKSH------AMLAQTGKKFVLEVRGMG 114 S+ W+ R+ E T + +A A++++ A ++ A+L QTG +VLEVRG+G Sbjct: 61 TASYVWLHRAPHEST--PATMSSASAAVDTHAATNYGNNGVPALLGQTGANYVLEVRGLG 118 Query: 115 VAVAKKTDEEIWEAIEEKADNHATYFSQNPEDYTDSADQRLSDLGVATRLPFKEAAGRAV 174 + +T+EEIW+AI+ KADNH+TY SQNP DY + D+R++DLG++TR+ FK A +V Sbjct: 119 LVTGHETNEEIWKAIQAKADNHSTYMSQNPADYPANKDERMTDLGLSTRISFKFGARNSV 178 Query: 175 DQWPLPVIIWYPPKSKRTSRPAGDLAGIRQMAGLGVTLLLWQEDANTEDGAAMIERLFTF 234 + WP+PV IW PPK +R RP L GIRQ A LGVTLLLWQEDANT+DGA++IE+LF F Sbjct: 179 EYWPVPVFIWEPPKDRRFGRPGAALDGIRQEASLGVTLLLWQEDANTDDGASIIEKLFAF 238 Query: 235 FDTHPDVPAALIFSTDGSMMRSLMQTPGNVDTPEVGHVIPAMPDSVAAFLVTRSDRVDKL 294 FD+HPDVP A+I++ DGSM R L +TPG +DT E + IP+MPDS+ A LV+RSDRVD+L Sbjct: 239 FDSHPDVPEAVIYTLDGSMKRWLNETPGYIDTFEQSN-IPSMPDSMVAMLVSRSDRVDRL 297 Query: 295 IRPYVVQQRSNVNKNDTEFDIVKLWNFYWKKTEDRSPDGFNTHYLKEEKEAGVGSP-AMS 353 IRPY V+Q NVN T++DI +LWNF+WK +DR PD F HY +EK AGV +P + Sbjct: 298 IRPYAVEQTENVNNGTTDYDITRLWNFFWKVNQDRGPDSFTAHYEADEKRAGVNTPMSAG 357 Query: 354 LMSASWWQGQLPELWKNTTNQGPGDFKPTPYIPVRWTNWQLKQYDSAPLLG 404 ++++WWQ +LP+ WK +N+GPG+FKPTPYIPVRWT WQ+KQ+D+APLLG Sbjct: 358 FVTSAWWQTKLPDFWKTISNKGPGEFKPTPYIPVRWTTWQVKQFDNAPLLG 408