BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2077.p         (78 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774035.1| ferric uptake regulator protein [Herbaspiril...   131   4e-29
ref|YP_004754501.1| ferric uptake regulation protein FUR [Collim...   126   9e-28
ref|YP_001354580.1| Fur family transcriptional regulator, ferric...   122   3e-26
ref|YP_001100898.1| iron transport transcriptional repressor [He...   117   5e-25
ref|ZP_04579975.1| ferric uptake regulator protein [Oxalobacter ...   115   2e-24

>ref|YP_003774035.1| ferric uptake regulator protein [Herbaspirillum seropedicae SmR1]
 emb|CAM32617.1| Ferric uptake regulator protein [Herbaspirillum seropedicae]
 gb|ADJ62127.1| ferric uptake regulator protein [Herbaspirillum seropedicae SmR1]
          Length = 141

 Score =  131 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MPNNPSELKASGLKATLPRLKILEIFQNTSVRHLSAEDVYKQLLSDNLDVGLATVYRVLT 60
          MPNNPSELKASGLKATLPRLKILEIFQNTSVRHLSAEDVYKQLLSDNLDVGLATVYRVLT
Sbjct: 1  MPNNPSELKASGLKATLPRLKILEIFQNTSVRHLSAEDVYKQLLSDNLDVGLATVYRVLT 60

Query: 61 QFEQ 64
          QFEQ
Sbjct: 61 QFEQ 64


>ref|YP_004754501.1| ferric uptake regulation protein FUR [Collimonas fungivorans
          Ter331]
 gb|AEK63678.1| Ferric uptake regulation protein FUR [Collimonas fungivorans
          Ter331]
          Length = 141

 Score =  126 bits (317), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 61/64 (95%), Positives = 62/64 (96%)

Query: 1  MPNNPSELKASGLKATLPRLKILEIFQNTSVRHLSAEDVYKQLLSDNLDVGLATVYRVLT 60
          MPNNPSELKASGLKATLPRLKILEIFQN+ VRHLSAEDVYK LLSDNLDVGLATVYRVLT
Sbjct: 1  MPNNPSELKASGLKATLPRLKILEIFQNSEVRHLSAEDVYKILLSDNLDVGLATVYRVLT 60

Query: 61 QFEQ 64
          QFEQ
Sbjct: 61 QFEQ 64


>ref|YP_001354580.1| Fur family transcriptional regulator, ferric uptake regulator
          [Janthinobacterium sp. Marseille]
 gb|ABR88303.1| Fur family transcriptional regulator, ferric uptake regulator
          [Janthinobacterium sp. Marseille]
          Length = 145

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/64 (90%), Positives = 60/64 (93%)

Query: 1  MPNNPSELKASGLKATLPRLKILEIFQNTSVRHLSAEDVYKQLLSDNLDVGLATVYRVLT 60
          MPNNPSELKASGLKATLPRLKIL+IFQ   VRHLSAEDVYK LL+DNLDVGLATVYRVLT
Sbjct: 5  MPNNPSELKASGLKATLPRLKILDIFQTAEVRHLSAEDVYKMLLADNLDVGLATVYRVLT 64

Query: 61 QFEQ 64
          QFEQ
Sbjct: 65 QFEQ 68


>ref|YP_001100898.1| iron transport transcriptional repressor [Herminiimonas
          arsenicoxydans]
 emb|CAL62777.1| Ferric uptake regulation protein (Ferric uptake regulator)
          [Herminiimonas arsenicoxydans]
          Length = 140

 Score =  117 bits (293), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 58/64 (90%)

Query: 1  MPNNPSELKASGLKATLPRLKILEIFQNTSVRHLSAEDVYKQLLSDNLDVGLATVYRVLT 60
          M NNP ELKASGLKATLPRLKIL+IFQ   VRHLSAEDVYK LL+DNLDVGLATVYRVLT
Sbjct: 1  MTNNPCELKASGLKATLPRLKILDIFQTAEVRHLSAEDVYKMLLADNLDVGLATVYRVLT 60

Query: 61 QFEQ 64
          QFEQ
Sbjct: 61 QFEQ 64


>ref|ZP_04579975.1| ferric uptake regulator protein [Oxalobacter formigenes OXCC13]
 gb|EEO30948.1| ferric uptake regulator protein [Oxalobacter formigenes OXCC13]
          Length = 142

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 57/70 (81%), Positives = 63/70 (90%), Gaps = 2/70 (2%)

Query: 1  MPNNPSELKASGLKATLPRLKILEIFQNTSVRHLSAEDVYKQLLSDNLDVGLATVYRVLT 60
          M NNP+ELKA+GLKATLPRLKILEIFQ  SVRHLSAEDVY+ LLS+NL++GLATVYRVLT
Sbjct: 1  MSNNPAELKATGLKATLPRLKILEIFQKNSVRHLSAEDVYRLLLSENLEIGLATVYRVLT 60

Query: 61 QFEQRQPGIL 70
          QFE  Q GIL
Sbjct: 61 QFE--QAGIL 68