BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2068.p (501 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004682578.1| sulfite reductase flavoprotein alpha subunit... 471 e-130 ref|YP_299401.1| flavodoxin/nitric oxide synthase [Ralstonia eut... 471 e-130 ref|YP_842012.1| sulfite reductase [NADPH] flavoprotein alpha-co... 466 e-129 ref|YP_002008844.1| sulfite reductase [nadph] flavoprotein alpha... 463 e-128 ref|YP_587764.1| Sulfite reductase (NADPH) flavoprotein alpha-co... 460 e-127 >ref|YP_004682578.1| sulfite reductase flavoprotein alpha subunit CysJ [Cupriavidus necator N-1] gb|AEI81346.1| sulfite reductase flavoprotein alpha subunit CysJ [Cupriavidus necator N-1] Length = 527 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 278/488 (56%), Positives = 331/488 (67%), Gaps = 15/488 (3%) Query: 24 LRHRRAQQLQLAQWGTVQATGPQTVLVVFASQTGTAEQLAWQTAQSLRSGGLVVRVLPAG 83 L H R ++ ++A G +A LV +ASQTG AEQLA QTA +L+ G+ V++L Sbjct: 45 LAHHRQRRARVAALGGTEAGA---TLVAYASQTGFAEQLALQTATALQGAGVPVQLLSLA 101 Query: 84 QLTDADLQATRLALFVASTTGEGDAPDDASALARQLGSSDSTALPDLRFGVLALGDRSYQ 143 + LQ R ALF+ STTGEGDAPD AS AR+L + + L LR+G+LALGD SY Sbjct: 102 DVDARRLQTCRQALFLVSTTGEGDAPDSASGFARRL-LAGADGLQSLRYGILALGDSSYA 160 Query: 144 QYCAFGHALHAWLCRRHAQPLFDAIEVDNGDEGALRHWQHQLGVLSGHSDEADWSAPAYG 203 ++CAFGHAL WL R AQPLFD +EVDNGD GALRHWQ+ L LSG ++ ADW P Y Sbjct: 161 RFCAFGHALDGWLQRHRAQPLFDLVEVDNGDAGALRHWQNHLSALSGGAEIADWERPRYD 220 Query: 204 RWRLAGRRVLNPGSAGEPVFHLSLTPLDLPSPQWQAGDIAEIGPHNSGAAVNAFLQAIGR 263 WRL R LNPGS G P FHLSL P + WQAGDIAEIGP ++ A V L +G Sbjct: 221 SWRLVQRHHLNPGSQGAPAFHLSLAPQGDAAMDWQAGDIAEIGPCHAPAEVERLLARLGL 280 Query: 264 ----------QDDSLRAALATRLLPHEADQLAALRSLPDEELLAALPALPHRAYSIASLP 313 +D +L A+ATR+ P AA++ LP ++L+ LP LPHR YSIASLP Sbjct: 281 DGATPVRCDGRDTTLVEAVATRM-PLPEPHFAAMQGLPPQQLVDTLPPLPHREYSIASLP 339 Query: 314 ADGALELMVRLMHLPDGRAGLGSGWLGLHAQPGQEIALRVRSNRSFHGPGDDRPLILIGN 373 DG LEL+VR DGR GL SGWL HA G IALR+R+NRSFH P DDRPLI++GN Sbjct: 340 QDGHLELLVRQTRYGDGRLGLASGWLTEHAAVGARIALRIRTNRSFHPPADDRPLIVVGN 399 Query: 374 GTGLAGLRAHLRERVAAGQRRNWLLFGERSRQHDFFHQQELQEWQAQGWLQRLDLAFSRD 433 GTGLAGLRA L+ R AAGQRRNWLLFGERS QHD F EL WQA G L+R+D A+SRD Sbjct: 400 GTGLAGLRAQLKARAAAGQRRNWLLFGERSAQHDAFFAGELAAWQADGTLRRVDHAWSRD 459 Query: 434 QAERVYVQDKLRAAADVLRQWVEEGASLYVCGSLQGMAGGVALALQEILGEDALQALAEQ 493 YVQD LRA + +RQWV +GA++YVCGSLQGMAGGV AL ILGEDAL+ LA+ Sbjct: 460 GGAPRYVQDALRAQGETVRQWVADGAAVYVCGSLQGMAGGVHDALAGILGEDALRRLADD 519 Query: 494 GRYRRDVY 501 GRYRRDVY Sbjct: 520 GRYRRDVY 527 >ref|YP_299401.1| flavodoxin/nitric oxide synthase [Ralstonia eutropha JMP134] gb|AAZ64557.1| Oxidoreductase FAD/NAD(P)-binding:Flavodoxin/nitric oxide synthase [Ralstonia eutropha JMP134] Length = 511 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 287/510 (56%), Positives = 334/510 (65%), Gaps = 14/510 (2%) Query: 3 TRYLMAALVALTYLVFCVMTFLRHRRAQQLQLAQWGTVQATGPQTVLVVFASQTGTAEQL 62 +R MAA V L Y FC F H R ++ ++A A LV +ASQTG AEQL Sbjct: 5 SRAGMAAGVLLAYAGFCGAVF-DHHRRRRARVASLAVSGAHQEGATLVAYASQTGFAEQL 63 Query: 63 AWQTAQSLRSGGLVVRVLPAGQLTDADLQATRLALFVASTTGEGDAPDDASALARQL-GS 121 A QTA +L+ G+ V +L +L L R ALFV STTGEGDAPD AS AR+L Sbjct: 64 AMQTATALQGAGMPVHLLSFEELDARRLARVRQALFVVSTTGEGDAPDSASGFARRLLAG 123 Query: 122 SDSTALPDLRFGVLALGDRSYQQYCAFGHALHAWLCRRHAQPLFDAIEVDNGDEGALRHW 181 AL LR+GVLALGD SY ++CAFGHAL WL R HA+PLFD IEVDNGD GALRHW Sbjct: 124 GGHDALRQLRYGVLALGDSSYARFCAFGHALSDWLQRHHARPLFDLIEVDNGDAGALRHW 183 Query: 182 QHQLGVLSGHSDEADWSAPAYGRWRLAGRRVLNPGSAGEPVFHLSLTPLDLPSPQWQAGD 241 Q+ L LSG ++ ADW P Y W+LA R LNPGS G P FHL L P + P WQAGD Sbjct: 184 QNHLSALSGGAEIADWERPRYEHWQLAAREHLNPGSDGAPAFHLVLRP-EGAVPGWQAGD 242 Query: 242 IAEIGPHNSGAAVNAFLQAIGR----------QDDSLRAALATRLLPHEADQLAALRSLP 291 IAE+GP + A + L + Q +L ALATRLL EA LA +R+LP Sbjct: 243 IAEVGPCHDPADIGRLLSHLSMDGAAPVRCDAQTVTLAEALATRLLLPEA-HLATMRALP 301 Query: 292 DEELLAALPALPHRAYSIASLPADGALELMVRLMHLPDGRAGLGSGWLGLHAQPGQEIAL 351 ++L+ AL LPHR YSIASLP DG LEL+VR DGR GL SGWL HA G IAL Sbjct: 302 PQQLVDALSPLPHREYSIASLPQDGQLELLVRQTRHADGRLGLASGWLTSHAPVGARIAL 361 Query: 352 RVRSNRSFHGPGDDRPLILIGNGTGLAGLRAHLRERVAAGQRRNWLLFGERSRQHDFFHQ 411 R+R+NRSFH P D RP +LIGNGTGLAGLR HL+ R AG+ RNWL FGERS +HD F Sbjct: 362 RIRTNRSFHSPADGRPQVLIGNGTGLAGLRGHLKARALAGRHRNWLFFGERSARHDGFFA 421 Query: 412 QELQEWQAQGWLQRLDLAFSRDQAERVYVQDKLRAAADVLRQWVEEGASLYVCGSLQGMA 471 EL WQAQG L+R+DL +SRD YVQD LR A VLR+WVE GA++YVCGSLQGMA Sbjct: 422 DELAAWQAQGVLERVDLVYSRDGNALRYVQDALRERAPVLREWVEAGAAIYVCGSLQGMA 481 Query: 472 GGVALALQEILGEDALQALAEQGRYRRDVY 501 GGV AL ++LGE L+ L EQGRYRRDVY Sbjct: 482 GGVNDALADVLGEAGLRRLTEQGRYRRDVY 511 >ref|YP_842012.1| sulfite reductase [NADPH] flavoprotein alpha-component [Ralstonia eutropha H16] emb|CAJ97282.1| sulfite reductase [NADPH] flavoprotein alpha-component [Ralstonia eutropha H16] Length = 527 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 284/494 (57%), Positives = 333/494 (67%), Gaps = 16/494 (3%) Query: 18 FCVMTFLRHRRAQQLQLAQWGTVQATGPQTVLVVFASQTGTAEQLAWQTAQSLRSGGLVV 77 FC HR+ + +A GT + LV +ASQTG AEQLA QTA +L G+ V Sbjct: 40 FCSAVLAHHRQRRVRVVALAGTEEGA----TLVAYASQTGFAEQLALQTANALHGAGVPV 95 Query: 78 RVLPAGQLTDADLQATRLALFVASTTGEGDAPDDASALARQLGSSDSTALPDLRFGVLAL 137 ++L + LQA R ALF+ STTGEGDAPD AS AR+L + + L LR+G+LAL Sbjct: 96 QLLSLADVDARRLQACRQALFLVSTTGEGDAPDSASGFARRL-LAGADGLQSLRYGILAL 154 Query: 138 GDRSYQQYCAFGHALHAWLCRRHAQPLFDAIEVDNGDEGALRHWQHQLGVLSGHSDEADW 197 GD SY ++CAFGHAL WL R AQPLFD +EVDNGD GALRHWQ+ L LSG ++ ADW Sbjct: 155 GDSSYARFCAFGHALDGWLQRHRAQPLFDLVEVDNGDAGALRHWQNHLSALSGGAEIADW 214 Query: 198 SAPAYGRWRLAGRRVLNPGSAGEPVFHLSLTPLDLPSPQWQAGDIAEIGPHNSGAAVNAF 257 P Y WRLA RR LNPGS G P FHLSL P D + WQAGDIAEIGP ++ A V Sbjct: 215 ERPRYDSWRLAQRRHLNPGSQGAPAFHLSLAPQDDAAMDWQAGDIAEIGPCHAPAEVERL 274 Query: 258 LQAIGR----------QDDSLRAALATRLLPHEADQLAALRSLPDEELLAALPALPHRAY 307 L +G +D +L AL TR+ EA AA++ LP ++L+ LP LPHR Y Sbjct: 275 LARLGLDGATPVRCDGRDATLAEALGTRMPLPEA-HFAAMQGLPPQQLVDTLPPLPHREY 333 Query: 308 SIASLPADGALELMVRLMHLPDGRAGLGSGWLGLHAQPGQEIALRVRSNRSFHGPGDDRP 367 SIASLP DG LEL+VR DGR GL SGWL HA G IALR+R+NRSFH P DDRP Sbjct: 334 SIASLPRDGQLELLVRQTRYDDGRLGLASGWLTEHAAVGTRIALRIRTNRSFHPPADDRP 393 Query: 368 LILIGNGTGLAGLRAHLRERVAAGQRRNWLLFGERSRQHDFFHQQELQEWQAQGWLQRLD 427 LIL+GNGTGLAGLRA L+ R AAG+RRNWLLFGERS QHD F +L WQA G LQR+D Sbjct: 394 LILVGNGTGLAGLRAQLKARAAAGRRRNWLLFGERSAQHDAFFAGDLAAWQADGTLQRVD 453 Query: 428 LAFSRDQAERVYVQDKLRAAADVLRQWVEEGASLYVCGSLQGMAGGVALALQEILGEDAL 487 A+SRD YVQD LRA D +RQWV +GA++YVCGSLQGMAGGV AL ILG DAL Sbjct: 454 HAWSRDGGAPRYVQDALRAQGDTVRQWVADGAAIYVCGSLQGMAGGVHDALAGILGADAL 513 Query: 488 QALAEQGRYRRDVY 501 + LA+ GRYRRDVY Sbjct: 514 RRLADDGRYRRDVY 527 >ref|YP_002008844.1| sulfite reductase [nadph] flavoprotein alpha-component [Cupriavidus taiwanensis LMG 19424] emb|CAQ72792.1| Putative sulfite reductase [NADPH] flavoprotein alpha-component [Cupriavidus taiwanensis LMG 19424] Length = 527 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 286/494 (57%), Positives = 334/494 (67%), Gaps = 16/494 (3%) Query: 18 FCVMTFLRHRRAQQLQLAQWGTVQATGPQTVLVVFASQTGTAEQLAWQTAQSLRSGGLVV 77 FC HR+ + A+ + T LVV+ASQTG AEQLA QTA +L+ G+ V Sbjct: 40 FCGAVVAHHRQRR----ARVAALSGTEDGATLVVYASQTGFAEQLALQTATALQGAGMPV 95 Query: 78 RVLPAGQLTDADLQATRLALFVASTTGEGDAPDDASALARQLGSSDSTALPDLRFGVLAL 137 ++L ++ LQA R ALFV STTGEGDAPD AS AR+L + + L LR+G+LAL Sbjct: 96 QLLSLAEVDGRRLQACRQALFVVSTTGEGDAPDSASGFARRL-LAGADGLHRLRYGILAL 154 Query: 138 GDRSYQQYCAFGHALHAWLCRRHAQPLFDAIEVDNGDEGALRHWQHQLGVLSGHSDEADW 197 GD SY ++CAFGHAL WL R+ AQPLFD IEVDNGD GALRHWQ+ L LSG ++ ADW Sbjct: 155 GDSSYARFCAFGHALEGWLQRQRAQPLFDLIEVDNGDAGALRHWQNHLSALSGGAEIADW 214 Query: 198 SAPAYGRWRLAGRRVLNPGSAGEPVFHLSLTPLDLPSPQWQAGDIAEIGPHNSGAAVNAF 257 P Y WRLA R LNPGS G P FHL LTP D + WQAGDIAEIGP ++ A V+ Sbjct: 215 ERPRYEHWRLAQRHHLNPGSQGAPAFHLVLTPPDGAALDWQAGDIAEIGPCHAPAEVDRL 274 Query: 258 LQAIGR----------QDDSLRAALATRLLPHEADQLAALRSLPDEELLAALPALPHRAY 307 L +G +D L AALATRL P AA++ L ++L+ AL LPHR Y Sbjct: 275 LARLGMDGASPVRCDGRDTVLAAALATRL-PLPDPHFAAMQGLAPQQLVDALAPLPHREY 333 Query: 308 SIASLPADGALELMVRLMHLPDGRAGLGSGWLGLHAQPGQEIALRVRSNRSFHGPGDDRP 367 SIASLP DG LEL+VR DGR GL SGWL HA G IALR+R+NRSFH P DDRP Sbjct: 334 SIASLPRDGQLELLVRQTRHDDGRLGLASGWLTEHAAVGSRIALRLRTNRSFHPPADDRP 393 Query: 368 LILIGNGTGLAGLRAHLRERVAAGQRRNWLLFGERSRQHDFFHQQELQEWQAQGWLQRLD 427 LIL+GNGTGLAGLRA L+ R AAG+RRNWLLFGERS QHD F EL W A G L R+D Sbjct: 394 LILVGNGTGLAGLRAQLKARAAAGRRRNWLLFGERSVQHDAFFAGELASWLADGTLARVD 453 Query: 428 LAFSRDQAERVYVQDKLRAAADVLRQWVEEGASLYVCGSLQGMAGGVALALQEILGEDAL 487 A+SRD YVQD LR AD +R WV +GA++YVCGSLQGMAGGV AL EILGEDAL Sbjct: 454 HAWSRDGGAPRYVQDALRLQADGVRNWVADGAAIYVCGSLQGMAGGVHDALAEILGEDAL 513 Query: 488 QALAEQGRYRRDVY 501 + LA+ GRYRRDVY Sbjct: 514 RRLADDGRYRRDVY 527 >ref|YP_587764.1| Sulfite reductase (NADPH) flavoprotein alpha-component [Cupriavidus metallidurans CH34] gb|ABF12495.1| Sulfite reductase (NADPH) flavoprotein alpha-component [Cupriavidus metallidurans CH34] Length = 533 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 288/512 (56%), Positives = 333/512 (65%), Gaps = 15/512 (2%) Query: 4 RYLMAALVALTYLVFC--VMTFLRHRRAQQLQLAQWGTVQAT-GPQTVLVVFASQTGTAE 60 R MAA V + Y+ FC V+ R RA + LA + AT LV +ASQTG AE Sbjct: 23 RDAMAAGVVIAYVGFCWGVLDGHRRHRAARAALANVASDDATEDAHPTLVAYASQTGFAE 82 Query: 61 QLAWQTAQSLRSGGLVVRVLPAGQLTDADLQATRLALFVASTTGEGDAPDDASALARQL- 119 QLA QTA++L+ G V+++ +L A L A ALF+ STTGEGDAPD AS AR+L Sbjct: 83 QLAVQTARALQGAGRPVQLVSFAELDGARLAACDQALFLVSTTGEGDAPDMASGFARRLL 142 Query: 120 GSSDSTALPDLRFGVLALGDRSYQQYCAFGHALHAWLCRRHAQPLFDAIEVDNGDEGALR 179 + AL LR+GVLALGD SY +CAFG AL WL HAQPLFD +EVDNGD GALR Sbjct: 143 AGTTPDALRQLRYGVLALGDSSYAHFCAFGRALSGWLESHHAQPLFDRVEVDNGDPGALR 202 Query: 180 HWQHQLGVLSGHSDEADWSAPAYGRWRLAGRRVLNPGSAGEPVFHLSLTPLDLPSPQWQA 239 HWQ+ L LSG ++ ADW P YGRWRL RR+LNPGS GE FHL+L P D W+A Sbjct: 203 HWQNHLSALSGGAEIADWERPRYGRWRLVERRLLNPGSQGEAAFHLALEPEDASQLAWRA 262 Query: 240 GDIAEIGPHNSGAAVNAFLQAIG-------RQDD---SLRAALATRLLPHEADQLAALRS 289 GDIAEIGP V+ L + R D +L ALATRLL ++ QL L Sbjct: 263 GDIAEIGPCQPPDVVDRLLARLSLDGTAPVRCDSRPMTLSEALATRLLLPDS-QLDILTG 321 Query: 290 LPDEELLAALPALPHRAYSIASLPADGALELMVRLMHLPDGRAGLGSGWLGLHAQPGQEI 349 + L+ ALPALPHR YSIASLPADG LEL+VR DGR GL SGWL A+ G I Sbjct: 322 FTPQRLVDALPALPHREYSIASLPADGRLELLVRQTRHADGRLGLASGWLTEFAREGASI 381 Query: 350 ALRVRSNRSFHGPGDDRPLILIGNGTGLAGLRAHLRERVAAGQRRNWLLFGERSRQHDFF 409 ALRVR+NRSFH P D RPLILIGNGTGLAGLRA ++ R AG RNWLLFGERS HD F Sbjct: 382 ALRVRTNRSFHPPEDGRPLILIGNGTGLAGLRAVIKARAEAGHHRNWLLFGERSAAHDNF 441 Query: 410 HQQELQEWQAQGWLQRLDLAFSRDQAERVYVQDKLRAAADVLRQWVEEGASLYVCGSLQG 469 H +E Q W +QG LQR+D A+SRD A YVQD + A A + WVE+GAS+YVCGSLQG Sbjct: 442 HAEEFQAWLSQGVLQRVDHAWSRDGAMPRYVQDAVSAQAATIAAWVEQGASIYVCGSLQG 501 Query: 470 MAGGVALALQEILGEDALQALAEQGRYRRDVY 501 MA GV AL ILGE LQ L E G YRRDVY Sbjct: 502 MAAGVQDALLRILGESTLQRLTEAGSYRRDVY 533