BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2065.p (181 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001101617.1| putative signal peptide [Herminiimonas arsen... 217 5e-55 ref|YP_001355304.1| hypothetical protein mma_3614 [Janthinobacte... 214 6e-54 ref|YP_299404.1| hypothetical protein Reut_B5214 [Ralstonia eutr... 211 3e-53 ref|YP_587767.1| hypothetical protein Rmet_5639 [Cupriavidus met... 210 6e-53 ref|YP_004682581.1| hypothetical protein CNE_2c24020 [Cupriavidu... 205 2e-51 >ref|YP_001101617.1| putative signal peptide [Herminiimonas arsenicoxydans] emb|CAL63496.1| Conserved hypothetical protein; putative periplasmic protein [Herminiimonas arsenicoxydans] Length = 170 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 110/159 (69%), Positives = 132/159 (83%) Query: 23 AAAAPAGAAEMNVKIEIPTLNVAEYHRPYLAAWIERADQSVAANLAVWYDVKKKDKEGEK 82 A AP+ AA+MNVK+EIP L VAEYH+PY+A WIE ADQ+ NLAVWYD+K K+ EG K Sbjct: 12 ALTAPSFAADMNVKVEIPRLTVAEYHKPYVAFWIEGADQTFVRNLAVWYDLKMKNNEGTK 71 Query: 83 WLKDMRQWWRRSGREQQMPIDGVSGATRAPGEQKLNFGSGKGPLANLAPGDYVLMVEAAR 142 WLKDMRQWWR+SGR+ QMP+DG+SGATRAPGEQ+LNF + K L L G+Y L+VEAAR Sbjct: 72 WLKDMRQWWRKSGRDLQMPVDGLSGATRAPGEQQLNFNAAKSGLDKLPAGEYALVVEAAR 131 Query: 143 EVGGRELVKVPFQWPPKAAQSAKAQGTSELGAVALELKP 181 EVGGREL++VPFQWPPK+AQ+A+A+G ELGAV L LKP Sbjct: 132 EVGGRELIRVPFQWPPKSAQTAQAKGEHELGAVTLTLKP 170 >ref|YP_001355304.1| hypothetical protein mma_3614 [Janthinobacterium sp. Marseille] gb|ABR89879.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 170 Score = 214 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 106/159 (66%), Positives = 129/159 (81%) Query: 23 AAAAPAGAAEMNVKIEIPTLNVAEYHRPYLAAWIERADQSVAANLAVWYDVKKKDKEGEK 82 A PA AA++NVK+EIP L VAEYH+PY+A WIE ADQ+ NLAVWYD+K K+ EG K Sbjct: 12 ALTTPAFAADLNVKVEIPRLTVAEYHKPYVAFWIEGADQAFVRNLAVWYDLKMKNNEGTK 71 Query: 83 WLKDMRQWWRRSGREQQMPIDGVSGATRAPGEQKLNFGSGKGPLANLAPGDYVLMVEAAR 142 WLKDMRQWWR+SGR+ QMP+DG+SGATRAPGEQ+L+F K L L G+Y L+VEAAR Sbjct: 72 WLKDMRQWWRKSGRDLQMPVDGLSGATRAPGEQQLSFNGAKSGLDKLPAGEYSLVVEAAR 131 Query: 143 EVGGRELVKVPFQWPPKAAQSAKAQGTSELGAVALELKP 181 EVGGREL++VPFQWPPK Q+A+ +G ELGAV++ELKP Sbjct: 132 EVGGRELIRVPFQWPPKTTQTAQVKGEHELGAVSIELKP 170 >ref|YP_299404.1| hypothetical protein Reut_B5214 [Ralstonia eutropha JMP134] gb|AAZ64560.1| conserved hypothetical protein [Ralstonia eutropha JMP134] Length = 172 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 111/168 (66%), Positives = 132/168 (78%), Gaps = 2/168 (1%) Query: 14 LALAMAALFAAAAPAGAAEMNVKIEIPTLNVAEYHRPYLAAWIERADQSVAANLAVWYDV 73 + L A PA AA+MNVK+EIP LNVAEYHRPY+A W+ERADQS AA LAVWYDV Sbjct: 7 VTLTGMAAVPLTGPAFAADMNVKVEIPRLNVAEYHRPYVAVWVERADQSPAATLAVWYDV 66 Query: 74 KKKDKEGEKWLKDMRQWWRRSGREQQMPIDGVSGATRAPGEQKLNFGSGKGPLANLAPGD 133 K +KEG KWLKDMRQWWR++GR+ QMP DG+SGATRAPGE L F GK PL L G+ Sbjct: 67 K--NKEGTKWLKDMRQWWRKAGRDMQMPADGISGATRAPGEHTLTFTEGKAPLGKLPAGN 124 Query: 134 YVLMVEAAREVGGRELVKVPFQWPPKAAQSAKAQGTSELGAVALELKP 181 Y L+VEAAREVGGREL++VPF WPP++AQ+A+A+G ELG V ++LKP Sbjct: 125 YQLVVEAAREVGGRELLRVPFTWPPQSAQTARAKGEHELGGVTVDLKP 172 >ref|YP_587767.1| hypothetical protein Rmet_5639 [Cupriavidus metallidurans CH34] gb|ABF12498.1| conserved hypothetical protein; putative exported protein [Cupriavidus metallidurans CH34] Length = 173 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 106/150 (70%), Positives = 122/150 (81%) Query: 32 EMNVKIEIPTLNVAEYHRPYLAAWIERADQSVAANLAVWYDVKKKDKEGEKWLKDMRQWW 91 +MNVK+EIP LNVAEYHRPY++ WIERADQS LAVWYD K K+ +G KWLKDMRQWW Sbjct: 24 DMNVKVEIPRLNVAEYHRPYVSMWIERADQSPVTTLAVWYDAKNKESQGTKWLKDMRQWW 83 Query: 92 RRSGREQQMPIDGVSGATRAPGEQKLNFGSGKGPLANLAPGDYVLMVEAAREVGGRELVK 151 R++GR+ Q+P DGVSGATRAPGE L F GK PL L GDY L+VEAAREVGGRELV+ Sbjct: 84 RKTGRDMQLPADGVSGATRAPGEHALTFSDGKAPLGKLPAGDYQLVVEAAREVGGRELVR 143 Query: 152 VPFQWPPKAAQSAKAQGTSELGAVALELKP 181 VPF WPPKAAQSA A+G ELG V+++LKP Sbjct: 144 VPFAWPPKAAQSAGAKGEHELGGVSVDLKP 173 >ref|YP_004682581.1| hypothetical protein CNE_2c24020 [Cupriavidus necator N-1] gb|AEI81349.1| hypothetical protein CNE_2c24020 [Cupriavidus necator N-1] Length = 174 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 107/169 (63%), Positives = 130/169 (76%) Query: 13 ALALAMAALFAAAAPAGAAEMNVKIEIPTLNVAEYHRPYLAAWIERADQSVAANLAVWYD 72 ++ L A A PA AA+++VK++IP L VAEYHRPY+A W+ERADQS LAVWYD Sbjct: 6 SVTLTGMAAVPLAGPALAADLSVKVDIPRLTVAEYHRPYVAMWVERADQSPVQTLAVWYD 65 Query: 73 VKKKDKEGEKWLKDMRQWWRRSGREQQMPIDGVSGATRAPGEQKLNFGSGKGPLANLAPG 132 K KD EG KWLKDMRQWWR++GR+ MP DGVSGATRAPGE ++F GK PL L G Sbjct: 66 GKLKDGEGTKWLKDMRQWWRKAGRDLHMPADGVSGATRAPGEHSVSFSDGKAPLGKLPAG 125 Query: 133 DYVLMVEAAREVGGRELVKVPFQWPPKAAQSAKAQGTSELGAVALELKP 181 +Y L+VEAAREVGGREL++VPF WPP+AAQ+A+A+G ELG V +ELKP Sbjct: 126 NYQLVVEAAREVGGRELLRVPFTWPPQAAQTARAKGEHELGGVTVELKP 174