BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2051.p (524 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777281.1| ubiquinone biosynthesis transmembrane protei... 998 0.0 ref|YP_004751303.1| Ubiquinone biosynthesis monooxygenase [Colli... 857 0.0 ref|YP_001101088.1| 2-octaprenylphenol hydroxylase [Herminiimona... 838 0.0 ref|YP_001354798.1| ubiquinone biosynthesis protein [Janthinobac... 835 0.0 ref|ZP_08274323.1| Ubiquinone biosynthesis monooxygenase UbiB [O... 831 0.0 >ref|YP_003777281.1| ubiquinone biosynthesis transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65373.1| ubiquinone biosynthesis transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 524 Score = 998 bits (2579), Expect = 0.0, Method: Composition-based stats. Identities = 509/524 (97%), Positives = 520/524 (99%) Query: 1 MLLRSMRLLKIIRVAILYGLDEIIASEFAPPRIARIINRIFFWRDLTAPRGERLRRALED 60 MLLRSMRLLKI+RVAILYGLDEIIASEFAPPRIARIINRIFFWRDL+APRGERLRRALED Sbjct: 1 MLLRSMRLLKIVRVAILYGLDEIIASEFAPPRIARIINRIFFWRDLSAPRGERLRRALED 60 Query: 61 LGPIFIKFGQVLSTRRDLMPPDIANELTLLQDRVPPFESELAVKQIEKSLGAHPDQLFAS 120 LGPIFIKFGQVLSTRRDLMPPDIANELTLLQDRVPPF+SELAVKQIEKSLGAHPD LFA+ Sbjct: 61 LGPIFIKFGQVLSTRRDLMPPDIANELTLLQDRVPPFDSELAVKQIEKSLGAHPDLLFAT 120 Query: 121 FERTPVASASIAQVHFATLKDGKEVAVKVLRPGMRDIIDHDIGLMHVAADWLERLWADGR 180 FERTPVASASIAQVHFATLKDGKEVAVKVLRPGMRDIIDHDIGLMHVAADWLERLWADGR Sbjct: 121 FERTPVASASIAQVHFATLKDGKEVAVKVLRPGMRDIIDHDIGLMHVAADWLERLWADGR 180 Query: 181 RLKAKEVVGEFDKYLHDELDLMREAANASQLRRNFAESTLLMVPEMYWDYCSSSVIVMER 240 RLKAKEVVGEFDKYLHDELDLMREAANASQLRRNFAESTLLMVPEMYWDYCS SVIVMER Sbjct: 181 RLKAKEVVGEFDKYLHDELDLMREAANASQLRRNFAESTLLMVPEMYWDYCSPSVIVMER 240 Query: 241 MYGIPISQTERLRAEGVDLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSVAPETFGR 300 M+GIPISQTERLRAEGVDLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSVAPE+FGR Sbjct: 241 MHGIPISQTERLRAEGVDLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSVAPESFGR 300 Query: 301 YIALDFGIVGTLNDYDKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELEAAVRA 360 YIALDFGIVGTLND+DKDYLSQNFLAFFRRDYKRVAEAHIESGWAPK+TRVDELEAAVRA Sbjct: 301 YIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKDTRVDELEAAVRA 360 Query: 361 CCEPIFDRPLKDISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDL 420 CCEPIFDRPLKDISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDL Sbjct: 361 CCEPIFDRPLKDISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDL 420 Query: 421 WKTAKPYLERWMSEQIGWRGFVEQLKVEVPRYSRLLPELPRLAHQALTRYTDGGSQPQNT 480 WKTAKPYLERWMSEQIGWRGFVEQLKVEVPRYSRLLPELPRLAHQALTRYT+G SQPQNT Sbjct: 421 WKTAKPYLERWMSEQIGWRGFVEQLKVEVPRYSRLLPELPRLAHQALTRYTEGDSQPQNT 480 Query: 481 ELIRKLLAEQRRTNMLLGVIVYFGGGLIGGIIVIQVLMHFLKFY 524 ELIRKLLAEQRRTNM LGVIVYFGGGLIGG+IVIQ+LMHFLKFY Sbjct: 481 ELIRKLLAEQRRTNMFLGVIVYFGGGLIGGVIVIQLLMHFLKFY 524 >ref|YP_004751303.1| Ubiquinone biosynthesis monooxygenase [Collimonas fungivorans Ter331] gb|AEK60480.1| Ubiquinone biosynthesis monooxygenase [Collimonas fungivorans Ter331] Length = 525 Score = 857 bits (2215), Expect = 0.0, Method: Composition-based stats. Identities = 416/520 (80%), Positives = 470/520 (90%), Gaps = 1/520 (0%) Query: 1 MLLRSMRLLKIIRVAILYGLDEIIASEFAPPRIARIINRIFFWRDLTAPRGERLRRALED 60 M+L+ +RL KI+RVA+ YGLD+I S F PRI+++I+ + FWRD++APRGERLR ALE+ Sbjct: 1 MILKFLRLFKIVRVAVRYGLDDIAMSGFDTPRISKLIDTLIFWRDISAPRGERLRMALEE 60 Query: 61 LGPIFIKFGQVLSTRRDLMPPDIANELTLLQDRVPPFESELAVKQIEKSLGAHPDQLFAS 120 LGPIF+KFGQVLSTRRDL+P D+ +EL LQDRVPPF S+LA+ QIEKSL AHPDQLFAS Sbjct: 61 LGPIFVKFGQVLSTRRDLLPGDMVDELARLQDRVPPFSSDLAIAQIEKSLKAHPDQLFAS 120 Query: 121 FERTPVASASIAQVHFATLKDGKEVAVKVLRPGMRDIIDHDIGLMHVAADWLERLWADGR 180 FER PVASASIAQVHFATLK+GKEVAVKVLRPGM+ ID D+ LMH+AA +E+LWADGR Sbjct: 121 FERVPVASASIAQVHFATLKNGKEVAVKVLRPGMKKSIDEDVALMHIAAGLVEKLWADGR 180 Query: 181 RLKAKEVVGEFDKYLHDELDLMREAANASQLRRNFAESTLLMVPEMYWDYCSSSVIVMER 240 RLKA+EVVGEFDKYLHDELDLMREAAN SQLRRNFA S LL+VPEMYWDYCSSSVIVMER Sbjct: 181 RLKAREVVGEFDKYLHDELDLMREAANGSQLRRNFANSDLLVVPEMYWDYCSSSVIVMER 240 Query: 241 MYGIPISQTERLRAEGVDLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSVAPETFGR 300 M+GIPISQ +RLR GVDL KLSRDGVEIFFTQVFRDGFFHADMHPGNILVSVAP TFGR Sbjct: 241 MHGIPISQLDRLRDAGVDLGKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSVAPATFGR 300 Query: 301 YIALDFGIVGTLNDYDKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELEAAVRA 360 YIALDFGIVGTLND+DKDYLSQNFLAFF+RDYKRVAEAHIESGWAPKETRVDELE+AVRA Sbjct: 301 YIALDFGIVGTLNDFDKDYLSQNFLAFFQRDYKRVAEAHIESGWAPKETRVDELESAVRA 360 Query: 361 CCEPIFDRPLKDISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDL 420 CCEPIFDRPLKDISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDL Sbjct: 361 CCEPIFDRPLKDISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDL 420 Query: 421 WKTAKPYLERWMSEQIGWRGFVEQLKVEVPRYSRLLPELPRLAHQALTRYTDGGSQPQNT 480 WKTAKP+LERWMSEQ+GWRG ++QLK+E+PRYS+LLP+LPRLAHQALT+ + ++ QN Sbjct: 421 WKTAKPHLERWMSEQMGWRGLIQQLKIEMPRYSKLLPQLPRLAHQALTQAVEPKNE-QNN 479 Query: 481 ELIRKLLAEQRRTNMLLGVIVYFGGGLIGGIIVIQVLMHF 520 EL+ KL+AEQR+TN LGV+VY GGGL G+++ + + F Sbjct: 480 ELMWKLIAEQRQTNHFLGVLVYVGGGLAAGVLLTLLYLRF 519 >ref|YP_001101088.1| 2-octaprenylphenol hydroxylase [Herminiimonas arsenicoxydans] emb|CAL62967.1| 2-polyprenylphenol 6-hydroxylase [Herminiimonas arsenicoxydans] Length = 520 Score = 838 bits (2164), Expect = 0.0, Method: Composition-based stats. Identities = 412/520 (79%), Positives = 459/520 (88%), Gaps = 2/520 (0%) Query: 1 MLLRSMRLLKIIRVAILYGLDEIIASEFAPPRIARIINRIFFWRDLTAPRGERLRRALED 60 M+L+ +R+LKI+RVAI YGLD+I S PR +++N+I FWRDL+ PRG RLRRALED Sbjct: 1 MILKFLRVLKILRVAIRYGLDDIAMSGLRIPRTTKLLNQIMFWRDLSEPRGVRLRRALED 60 Query: 61 LGPIFIKFGQVLSTRRDLMPPDIANELTLLQDRVPPFESELAVKQIEKSLGAHPDQLFAS 120 LGPIF+KFGQVLSTRRDLMP DIA+EL LQDRVPPF SELA+ QI KSLGAHPD LFA Sbjct: 61 LGPIFVKFGQVLSTRRDLMPIDIADELARLQDRVPPFSSELAIAQIIKSLGAHPDVLFAH 120 Query: 121 FERTPVASASIAQVHFATLKDGKEVAVKVLRPGMRDIIDHDIGLMHVAADWLERLWADGR 180 FE PVASASIAQVHFA LK+G++VAVKVLRPG+R ID D+ LMH+ A +E+LWADG+ Sbjct: 121 FEAEPVASASIAQVHFARLKNGRDVAVKVLRPGVRKSIDDDVALMHIVAGLVEKLWADGK 180 Query: 181 RLKAKEVVGEFDKYLHDELDLMREAANASQLRRNFAESTLLMVPEMYWDYCSSSVIVMER 240 RLK KEVV EFDKYLHDELDLMREAAN SQLRRNFA S LL+VPEM+WDYCS+SVIVMER Sbjct: 181 RLKPKEVVAEFDKYLHDELDLMREAANGSQLRRNFAASKLLVVPEMFWDYCSTSVIVMER 240 Query: 241 MYGIPISQTERLRAEGVDLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSVAPETFGR 300 M GIPISQT+RL A G+DL KLSRDGVEIFFTQVFRDGFFHADMHPGNI VSVAPETFGR Sbjct: 241 MIGIPISQTDRLIAAGIDLKKLSRDGVEIFFTQVFRDGFFHADMHPGNIQVSVAPETFGR 300 Query: 301 YIALDFGIVGTLNDYDKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELEAAVRA 360 YIALDFGIVGTLND+DKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELE+AVRA Sbjct: 301 YIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELESAVRA 360 Query: 361 CCEPIFDRPLKDISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDL 420 CCEPIFDRPL +ISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDP+LDL Sbjct: 361 CCEPIFDRPLSEISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDL 420 Query: 421 WKTAKPYLERWMSEQIGWRGFVEQLKVEVPRYSRLLPELPRLAHQALTRYTDGGSQPQNT 480 WKTAKPYLE WM+EQ+GWRGF+E LK E PRYS+LLP+LPRLAHQALT+ ++ + NT Sbjct: 421 WKTAKPYLENWMNEQVGWRGFLENLKAEAPRYSKLLPQLPRLAHQALTQASE--PRQDNT 478 Query: 481 ELIRKLLAEQRRTNMLLGVIVYFGGGLIGGIIVIQVLMHF 520 ELIR+LL EQ+RTN+LLGV VYFGGGL+ G I+ + F Sbjct: 479 ELIRRLLEEQKRTNLLLGVAVYFGGGLVAGGILTLMFFTF 518 >ref|YP_001354798.1| ubiquinone biosynthesis protein [Janthinobacterium sp. Marseille] gb|ABR88520.1| ubiquinone biosynthesis protein [Janthinobacterium sp. Marseille] Length = 521 Score = 835 bits (2158), Expect = 0.0, Method: Composition-based stats. Identities = 411/523 (78%), Positives = 456/523 (87%), Gaps = 6/523 (1%) Query: 1 MLLRSMRLLKIIRVAILYGLDEIIASEFAPPRIARIINRIFFWRDLTAPRGERLRRALED 60 M+L+ +R+LKI+RVA+ YGLDEI S A PR A+ IN++ FWRDL+APR RLRRALED Sbjct: 1 MILKFLRVLKILRVALRYGLDEIAISGLAIPRTAKFINQVMFWRDLSAPRAIRLRRALED 60 Query: 61 LGPIFIKFGQVLSTRRDLMPPDIANELTLLQDRVPPFESELAVKQIEKSLGAHPDQLFAS 120 LGPIF+KFGQVLSTRRDLMP DIA+EL LQDRVPPF SELA+ QI KSLGAHPD LFA Sbjct: 61 LGPIFVKFGQVLSTRRDLMPIDIADELARLQDRVPPFSSELAIAQIIKSLGAHPDVLFAE 120 Query: 121 FERTPVASASIAQVHFATLKDGKEVAVKVLRPGMRDIIDHDIGLMHVAADWLERLWADGR 180 F+ PVASASIAQVHF LK+G VA+KVLRPG++ ID D+ LMH+ A +ER+WADG+ Sbjct: 121 FDPVPVASASIAQVHFGRLKNGTAVAIKVLRPGIKKSIDEDVALMHILAGLVERMWADGK 180 Query: 181 RLKAKEVVGEFDKYLHDELDLMREAANASQLRRNFAESTLLMVPEMYWDYCSSSVIVMER 240 RLK KEVV EFDKYLHDELDLMREAAN SQLRRNFA+S LL+VPEM+WDYCS+SVIVMER Sbjct: 181 RLKPKEVVAEFDKYLHDELDLMREAANGSQLRRNFADSNLLVVPEMFWDYCSTSVIVMER 240 Query: 241 MYGIPISQTERLRAEGVDLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSVAPETFGR 300 M GIPISQT+RL A GVDL KLSRDGVEIFFTQVFRDGFFHADMHPGNI VSV P TFGR Sbjct: 241 MVGIPISQTDRLIAAGVDLKKLSRDGVEIFFTQVFRDGFFHADMHPGNIQVSVEPATFGR 300 Query: 301 YIALDFGIVGTLNDYDKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELEAAVRA 360 YIALDFGIVGTLND+DKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELE+AVRA Sbjct: 301 YIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELESAVRA 360 Query: 361 CCEPIFDRPLKDISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDL 420 CCEPIFDRPL +ISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDP+LDL Sbjct: 361 CCEPIFDRPLSEISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDL 420 Query: 421 WKTAKPYLERWMSEQIGWRGFVEQLKVEVPRYSRLLPELPRLAHQALTRYTDGGSQPQ-- 478 WKTAKPYLE WM+EQ+GWRG E LK E PRYS+LLP+LPRLAHQALT+ SQPQ Sbjct: 421 WKTAKPYLENWMNEQVGWRGLWENLKAEAPRYSKLLPQLPRLAHQALTQ----ASQPQND 476 Query: 479 NTELIRKLLAEQRRTNMLLGVIVYFGGGLIGGIIVIQVLMHFL 521 NTELI++LL EQ+RTN+LLGV +YFGGGL+ G I+ V F+ Sbjct: 477 NTELIKRLLEEQKRTNLLLGVAIYFGGGLVAGGILTLVFFTFV 519 >ref|ZP_08274323.1| Ubiquinone biosynthesis monooxygenase UbiB [Oxalobacteraceae bacterium IMCC9480] gb|EGF32184.1| Ubiquinone biosynthesis monooxygenase UbiB [Oxalobacteraceae bacterium IMCC9480] Length = 523 Score = 831 bits (2146), Expect = 0.0, Method: Composition-based stats. Identities = 407/525 (77%), Positives = 459/525 (87%), Gaps = 6/525 (1%) Query: 1 MLLRSMRLLKIIRVAILYGLDEIIASEFAPPRIARIINRIFFWRDLTAPRGERLRRALED 60 M + +R+LKI RVAI YGLD+I S PR A++I+ + FWRD++APRGERLRRALE+ Sbjct: 1 MSFKFLRVLKIARVAIKYGLDDIAMSGLKIPRTAKLIDTLIFWRDISAPRGERLRRALEE 60 Query: 61 LGPIFIKFGQVLSTRRDLMPPDIANELTLLQDRVPPFESELAVKQIEKSLGAHPDQLFAS 120 LGPIF+KFGQVLSTRRDLMPPDIA ELT LQDRVPPF+SELA+ QI KSLGAHP +LFAS Sbjct: 61 LGPIFVKFGQVLSTRRDLMPPDIAEELTSLQDRVPPFDSELAIAQITKSLGAHPSELFAS 120 Query: 121 FERTPVASASIAQVHFATLKDGKEVAVKVLRPGMRDIIDHDIGLMHVAADWLERLWADGR 180 F+R PVASASIAQVHFA LKDG+EVAVKVLRPGM+ ID D+ LMHVAA +ERLWAD + Sbjct: 121 FDRVPVASASIAQVHFAVLKDGREVAVKVLRPGMKKSIDEDVALMHVAAGLVERLWADAK 180 Query: 181 RLKAKEVVGEFDKYLHDELDLMREAANASQLRRNFAESTLLMVPEMYWDYCSSSVIVMER 240 RLK +EVVGEFDKYLHDELDLMREAAN SQLRRNFA+STLLMVPEM WDYCSS+VIVMER Sbjct: 181 RLKPREVVGEFDKYLHDELDLMREAANGSQLRRNFADSTLLMVPEMMWDYCSSAVIVMER 240 Query: 241 MYGIPISQTERLRAEGVDLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSVAPETFGR 300 M GIPIS+ ++L A GVD+ KLS DGVEIFFTQVFRDGFFHADMHPGNILVS+ P T GR Sbjct: 241 MKGIPISRIDQLVAAGVDMKKLSSDGVEIFFTQVFRDGFFHADMHPGNILVSIEPATLGR 300 Query: 301 YIALDFGIVGTLNDYDKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELEAAVRA 360 YIALDFGIVGTLND+DKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELE+AVRA Sbjct: 301 YIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELESAVRA 360 Query: 361 CCEPIFDRPLKDISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDL 420 CCEPIFDRPLKDISFGQ+LLRLFQTSRRFNVEVQPQLVLLQKTLLN+EGLGRQLDPDLDL Sbjct: 361 CCEPIFDRPLKDISFGQILLRLFQTSRRFNVEVQPQLVLLQKTLLNIEGLGRQLDPDLDL 420 Query: 421 WKTAKPYLERWMSEQIGWRGFVEQLKVEVPRYSRLLPELPRLAHQALTRYTDGGSQPQ-- 478 WKTAKPYLERWM+EQIGWRG VE+LK E P Y++LLP+LPR+ HQAL + +QP Sbjct: 421 WKTAKPYLERWMTEQIGWRGLVERLKAEAPHYNKLLPQLPRMMHQALAQI----AQPNDD 476 Query: 479 NTELIRKLLAEQRRTNMLLGVIVYFGGGLIGGIIVIQVLMHFLKF 523 N L+ LLAEQRRTN L+G +VYF GLIGG+++++ + +L + Sbjct: 477 NKVLLVALLAEQRRTNRLIGTVVYFAAGLIGGLLLVRFVGRWLAW 521