BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2046.p (253 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777278.1| short-chain dehydrogenase [Herbaspirillum se... 371 e-101 ref|YP_001353550.1| short chain dehydrogenase/reductase family o... 322 3e-86 ref|YP_001480659.1| short-chain dehydrogenase/reductase SDR [Ser... 318 5e-85 ref|ZP_07776997.1| short chain dehydrogenase [Pseudomonas fluore... 317 9e-85 ref|YP_004355368.1| short chain dehydrogenase [Pseudomonas brass... 314 7e-84 >ref|YP_003777278.1| short-chain dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ65370.1| short-chain dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 257 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 223/244 (91%), Positives = 232/244 (95%) Query: 10 TLSNKVAFVQGGSRGIGAAIVKRLVQEGAIVAFTYVTSPDKAQALVSRVEAAGGRALAIQ 69 TL +KVAFVQGGSRGIGAAIV+RL EGA VAFTYV+SPDKAQALVS V+A GGRALAIQ Sbjct: 14 TLVSKVAFVQGGSRGIGAAIVQRLAAEGATVAFTYVSSPDKAQALVSSVQAKGGRALAIQ 73 Query: 70 ADSADAAALQQAIRLAAETFGRLDILVNNAGVLALGPIDEFKLEDLDRTLAVNVRSVVVA 129 ADSADAAALQQAIRLAAETFGRLDILVNNAGVLA+GP+D+FKLEDLDRTLAVNVRSV VA Sbjct: 74 ADSADAAALQQAIRLAAETFGRLDILVNNAGVLAMGPLDQFKLEDLDRTLAVNVRSVFVA 133 Query: 130 TQAAVRYMGEGGRVISIGSTNADRIPFAGGAVYAMSKSALVGLTKGLARDLGARGITVNN 189 TQ A RYMGEGGRVISIGSTNADRIPFAGGAVYAMSKSALVGLTKGLARDLG RGITVNN Sbjct: 134 TQEAARYMGEGGRVISIGSTNADRIPFAGGAVYAMSKSALVGLTKGLARDLGPRGITVNN 193 Query: 190 VQPGPVDTDMNPANSDFATSLTGLMALPRYGKAEEIASFVAYLAGPEAGYITGANLMIDG 249 VQPGPVDTDMNPA+ DFA SLTGLMALPRYGKAEEIASFVAYLAGPE+GYITGANLMIDG Sbjct: 194 VQPGPVDTDMNPASGDFAASLTGLMALPRYGKAEEIASFVAYLAGPESGYITGANLMIDG 253 Query: 250 GFSA 253 GFSA Sbjct: 254 GFSA 257 >ref|YP_001353550.1| short chain dehydrogenase/reductase family oxidoreductase [Janthinobacterium sp. Marseille] gb|ABR90017.1| oxidoreductase, short chain dehydrogenase/reductase family [Janthinobacterium sp. Marseille] Length = 249 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 195/243 (80%), Positives = 221/243 (90%) Query: 11 LSNKVAFVQGGSRGIGAAIVKRLVQEGAIVAFTYVTSPDKAQALVSRVEAAGGRALAIQA 70 L+ KVAFVQGGSRGIGAAIVKRL ++GA VAFTYV+S DKA+A+ +EAAGGRALAI A Sbjct: 7 LTGKVAFVQGGSRGIGAAIVKRLARDGAAVAFTYVSSADKAKAVAQEIEAAGGRALAIHA 66 Query: 71 DSADAAALQQAIRLAAETFGRLDILVNNAGVLALGPIDEFKLEDLDRTLAVNVRSVVVAT 130 DS+DA+A+QQAI+ AA+ FGR+DILVNNAGVLAL P+++FKLED DRT+AVNVRSV VAT Sbjct: 67 DSSDASAVQQAIQAAAKAFGRIDILVNNAGVLALAPVEDFKLEDFDRTVAVNVRSVFVAT 126 Query: 131 QAAVRYMGEGGRVISIGSTNADRIPFAGGAVYAMSKSALVGLTKGLARDLGARGITVNNV 190 Q A R+MGEGGR+I+IGSTNADR+PFAGGAVYAMSK+A+VGLTKGLARDLG RGITVNNV Sbjct: 127 QEAARHMGEGGRIITIGSTNADRMPFAGGAVYAMSKAAIVGLTKGLARDLGPRGITVNNV 186 Query: 191 QPGPVDTDMNPANSDFATSLTGLMALPRYGKAEEIASFVAYLAGPEAGYITGANLMIDGG 250 QPGPVDTDMNPANSDFA +L GLMA+ RYGK EEIASFVAYLAGPEAGYITGA+L IDGG Sbjct: 187 QPGPVDTDMNPANSDFADTLKGLMAIGRYGKDEEIASFVAYLAGPEAGYITGASLTIDGG 246 Query: 251 FSA 253 F A Sbjct: 247 FGA 249 >ref|YP_001480659.1| short-chain dehydrogenase/reductase SDR [Serratia proteamaculans 568] gb|ABV43531.1| short-chain dehydrogenase/reductase SDR [Serratia proteamaculans 568] Length = 249 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 189/245 (77%), Positives = 211/245 (86%) Query: 9 LTLSNKVAFVQGGSRGIGAAIVKRLVQEGAIVAFTYVTSPDKAQALVSRVEAAGGRALAI 68 L+L KVAF+QGGSRGIGAAI KRL +EGA VA TYV S DKA A+VS + AAGG+ALAI Sbjct: 5 LSLQGKVAFIQGGSRGIGAAIAKRLAREGAAVALTYVASADKADAVVSEITAAGGKALAI 64 Query: 69 QADSADAAALQQAIRLAAETFGRLDILVNNAGVLALGPIDEFKLEDLDRTLAVNVRSVVV 128 +ADSADA ALQQA+R A + G LDILVNNAGVLA+G +E LEDLDRTLAVNVRSV V Sbjct: 65 KADSADATALQQAVRQAVNSLGNLDILVNNAGVLAMGSTEELPLEDLDRTLAVNVRSVFV 124 Query: 129 ATQAAVRYMGEGGRVISIGSTNADRIPFAGGAVYAMSKSALVGLTKGLARDLGARGITVN 188 A+Q A R+M +GGR+I+IGSTNA+R+PFAGGAVYAMSKSALVGLTKG+ARDLG RGITVN Sbjct: 125 ASQEAARHMNDGGRIINIGSTNAERMPFAGGAVYAMSKSALVGLTKGMARDLGPRGITVN 184 Query: 189 NVQPGPVDTDMNPANSDFATSLTGLMALPRYGKAEEIASFVAYLAGPEAGYITGANLMID 248 NVQPGPVDTDMNP NSDFA L G+MA+ RYGK EEIASFVAYL GPEAGYITGA+L ID Sbjct: 185 NVQPGPVDTDMNPDNSDFAEQLKGMMAIGRYGKDEEIASFVAYLVGPEAGYITGASLSID 244 Query: 249 GGFSA 253 GGFSA Sbjct: 245 GGFSA 249 >ref|ZP_07776997.1| short chain dehydrogenase [Pseudomonas fluorescens WH6] gb|EFQ62023.1| short chain dehydrogenase [Pseudomonas fluorescens WH6] Length = 248 Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats. Identities = 189/243 (77%), Positives = 211/243 (86%) Query: 11 LSNKVAFVQGGSRGIGAAIVKRLVQEGAIVAFTYVTSPDKAQALVSRVEAAGGRALAIQA 70 LS KVA +QGGSRGIGAAIV+RL +GA VAFTYV+S KAQAL V +AGG+ALAI A Sbjct: 6 LSGKVALIQGGSRGIGAAIVQRLAAQGAAVAFTYVSSAAKAQALQDSVISAGGKALAIHA 65 Query: 71 DSADAAALQQAIRLAAETFGRLDILVNNAGVLALGPIDEFKLEDLDRTLAVNVRSVVVAT 130 DSADA A++ A+ E FGRLDILVNNAGVLA+ P+++FKLED D+TLA+NVRSV +AT Sbjct: 66 DSADATAIRNAVNATVEAFGRLDILVNNAGVLAIAPLEDFKLEDFDQTLAINVRSVFIAT 125 Query: 131 QAAVRYMGEGGRVISIGSTNADRIPFAGGAVYAMSKSALVGLTKGLARDLGARGITVNNV 190 Q A R+MGEGGRVI+IGSTNA+R+PFAGGA YAMSKSALVGLTKGLARDLG RGITVNNV Sbjct: 126 QEAARHMGEGGRVINIGSTNAERMPFAGGATYAMSKSALVGLTKGLARDLGPRGITVNNV 185 Query: 191 QPGPVDTDMNPANSDFATSLTGLMALPRYGKAEEIASFVAYLAGPEAGYITGANLMIDGG 250 QPGPVDTDMNPANSDFA SL GLMA+ RYG EEIASFVAYLAGPEAGYITGA+L IDGG Sbjct: 186 QPGPVDTDMNPANSDFADSLIGLMAVGRYGHVEEIASFVAYLAGPEAGYITGASLTIDGG 245 Query: 251 FSA 253 FSA Sbjct: 246 FSA 248 >ref|YP_004355368.1| short chain dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA70364.1| Putative short chain dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 248 Score = 314 bits (805), Expect = 7e-84, Method: Composition-based stats. Identities = 186/246 (75%), Positives = 213/246 (86%) Query: 8 NLTLSNKVAFVQGGSRGIGAAIVKRLVQEGAIVAFTYVTSPDKAQALVSRVEAAGGRALA 67 N LS KVA +QGGSRGIGAAIVKRL EGA VAFTYV+S K++ L + + AAGG+ALA Sbjct: 3 NQALSGKVALIQGGSRGIGAAIVKRLAAEGAAVAFTYVSSGAKSEELQNSITAAGGKALA 62 Query: 68 IQADSADAAALQQAIRLAAETFGRLDILVNNAGVLALGPIDEFKLEDLDRTLAVNVRSVV 127 I+ADSADA A++ A+ E FGRLDILVNNAGVLA+GP+DEFKLED D+TLA+NVRSV Sbjct: 63 IKADSADAEAIRNAVAATVEAFGRLDILVNNAGVLAIGPLDEFKLEDFDQTLAINVRSVF 122 Query: 128 VATQAAVRYMGEGGRVISIGSTNADRIPFAGGAVYAMSKSALVGLTKGLARDLGARGITV 187 +ATQAA R+MGEGGR+I+IGSTNADR+PFAGG YAMSK+ALVGLTKGLARDLG RGITV Sbjct: 123 IATQAAARHMGEGGRIINIGSTNADRMPFAGGGPYAMSKAALVGLTKGLARDLGPRGITV 182 Query: 188 NNVQPGPVDTDMNPANSDFATSLTGLMALPRYGKAEEIASFVAYLAGPEAGYITGANLMI 247 NNVQPGPVDTDMNPA+S+FA+SL LMA+ RYG +EIASFVAYLAGPEAGYITGA+L I Sbjct: 183 NNVQPGPVDTDMNPADSEFASSLMSLMAVGRYGNVDEIASFVAYLAGPEAGYITGASLTI 242 Query: 248 DGGFSA 253 DGGF A Sbjct: 243 DGGFGA 248