BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2038.p (403 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777269.1| membrane-bound lytic murein transglycosylase... 633 e-179 ref|YP_004751363.1| putative Membrane-bound lytic murein transgl... 509 e-142 ref|YP_001351929.1| membrane-bound transglycolase [Janthinobacte... 507 e-141 ref|YP_001098568.1| membrane-bound lytic murein transglycosylase... 476 e-132 emb|CAL60439.2| Putative Membrane-bound lytic murein transglycos... 475 e-132 >ref|YP_003777269.1| membrane-bound lytic murein transglycosylase [Herbaspirillum seropedicae SmR1] gb|ADJ65361.1| membrane-bound lytic murein transglycosylase protein [Herbaspirillum seropedicae SmR1] Length = 410 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 332/400 (83%), Positives = 360/400 (90%), Gaps = 6/400 (1%) Query: 6 TSIRR-SLPALAVIVAVSLAACTTTPLP-PAMRTPSKPTTPVQPEGQAQGMQKSSFAAMP 63 +S+RR S+PA+A+ VAV LAAC TTP+ P + PS P QP M+ +SF+ +P Sbjct: 15 SSLRRLSVPAMAISVAVLLAACQTTPVTTPGVSQPS-PRPTAQP---GPAMRATSFSQLP 70 Query: 64 GWDRDALRDAWPAFLTSCQTLIRRSEWKNACTTARQVNADDKGAIRAFFESGFTPYKVFN 123 GW+ D LR+AWPA +SC +IR+ EW+ AC A+QVN D G +R +FE+ FTPY+++N Sbjct: 71 GWNNDDLREAWPAVQSSCSVMIRKPEWRAACAAAQQVNGSDLGLLRQYFETYFTPYQLYN 130 Query: 124 PDGTDTGLVTGYYEPLLRGSRRRAGPYQTPLYQAPDDLLTIDMASVYPELKNLRLRGKVV 183 DGTDTGLVTGYYEPLLRGSRRR+GPYQTPLYQAPDDLLTIDMASVYPELKNLRLRGKVV Sbjct: 131 QDGTDTGLVTGYYEPLLRGSRRRSGPYQTPLYQAPDDLLTIDMASVYPELKNLRLRGKVV 190 Query: 184 GRKVVPYPTRAELMQGNSLSGKEIVWVDDPVEAFFLQVQGSGRVYLPESRETIRLAYADQ 243 GRKVVPYPTRAELMQGN+L+GKEIVWVDDPVEAFFLQVQGSGRVYLPESRETIRLAYADQ Sbjct: 191 GRKVVPYPTRAELMQGNALAGKEIVWVDDPVEAFFLQVQGSGRVYLPESRETIRLAYADQ 250 Query: 244 NGRPYKSIGRYLVDKGEMELSQASAQNIKAWVQANPARKEELLNANPSYVFFKEEKLPDP 303 NGRPYKSIGRYLVDKGEMELSQASAQNIKAWVQANPARKEELLNANPSYVFFKEEKLPDP Sbjct: 251 NGRPYKSIGRYLVDKGEMELSQASAQNIKAWVQANPARKEELLNANPSYVFFKEEKLPDP 310 Query: 304 SKGPKGAQGIPLTPQRSIAIDPQHVPLGAPVFLATTLPNSDRPLQRLVVAQDTGGAIRGV 363 SKGPKGAQGIPLTPQRSIAIDPQHVPLGAPVFLATTLPNSDRPLQRLVVAQDTGGAIRGV Sbjct: 311 SKGPKGAQGIPLTPQRSIAIDPQHVPLGAPVFLATTLPNSDRPLQRLVVAQDTGGAIRGV 370 Query: 364 VRADYFWGFGDEAEDRAGAMKQRGMMWVLLPKGMTPPGGN 403 VRADYFWGFGDEAEDRAG+MKQRGMMWVLLPKGMTPP GN Sbjct: 371 VRADYFWGFGDEAEDRAGSMKQRGMMWVLLPKGMTPPSGN 410 >ref|YP_004751363.1| putative Membrane-bound lytic murein transglycosylase MltA family [Collimonas fungivorans Ter331] gb|AEK60540.1| Putative Membrane-bound lytic murein transglycosylase MltA family [Collimonas fungivorans Ter331] Length = 399 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 264/390 (67%), Positives = 318/390 (81%), Gaps = 3/390 (0%) Query: 9 RRSLPA-LAVIVAVSLAACTTTPLPPAM-RTPSKPTTPVQPEGQ-AQGMQKSSFAAMPGW 65 R SLPA A I+A+SLAACTTTP+ P P +P TP P ++ ++FAA+PGW Sbjct: 5 RISLPASAAFIIALSLAACTTTPVTPPAPEGPRQPGTPTAPSAAPGANLRATTFAALPGW 64 Query: 66 DRDALRDAWPAFLTSCQTLIRRSEWKNACTTARQVNADDKGAIRAFFESGFTPYKVFNPD 125 D LR PAFLTSC T R+S+WK C A ++ +++ AIR FF+S FTPY+V NPD Sbjct: 65 GSDDLRQVLPAFLTSCSTQARKSDWKEPCAVAAGLDGNNESAIRTFFQSFFTPYQVINPD 124 Query: 126 GTDTGLVTGYYEPLLRGSRRRAGPYQTPLYQAPDDLLTIDMASVYPELKNLRLRGKVVGR 185 G+D GLVTGYYEPLL+GSR+R GPYQTP+Y+AP+DLLT+++AS+YPELK LRLRG++VG Sbjct: 125 GSDNGLVTGYYEPLLKGSRKRGGPYQTPIYRAPEDLLTVELASIYPELKGLRLRGRLVGS 184 Query: 186 KVVPYPTRAELMQGNSLSGKEIVWVDDPVEAFFLQVQGSGRVYLPESRETIRLAYADQNG 245 KVVPYP RAEL + L+GKEI+WVDDP++AFFLQVQGSGRV + + +R+AYADQNG Sbjct: 185 KVVPYPNRAELDKSGVLAGKEILWVDDPIDAFFLQVQGSGRVQMNDGSSIVRVAYADQNG 244 Query: 246 RPYKSIGRYLVDKGEMELSQASAQNIKAWVQANPARKEELLNANPSYVFFKEEKLPDPSK 305 PYKSIGRYLVDKGE+ L+QASAQ IKAW+ ANP R++ELLNANPSYVFFKEEK+ DPSK Sbjct: 245 YPYKSIGRYLVDKGELTLAQASAQGIKAWLAANPGRQQELLNANPSYVFFKEEKVTDPSK 304 Query: 306 GPKGAQGIPLTPQRSIAIDPQHVPLGAPVFLATTLPNSDRPLQRLVVAQDTGGAIRGVVR 365 GPKGAQG+PLTP RSIA+DPQ VPLG PVFLATT PNS+ LQ+LVVAQDTGGAI+G VR Sbjct: 305 GPKGAQGVPLTPLRSIAVDPQFVPLGTPVFLATTQPNSNALLQQLVVAQDTGGAIKGAVR 364 Query: 366 ADYFWGFGDEAEDRAGAMKQRGMMWVLLPK 395 AD+FWGFG+EA D+AG MKQRGMMW+LLPK Sbjct: 365 ADFFWGFGNEAGDKAGRMKQRGMMWLLLPK 394 >ref|YP_001351929.1| membrane-bound transglycolase [Janthinobacterium sp. Marseille] gb|ABR88282.1| membrane-bound transglycolase [Janthinobacterium sp. Marseille] Length = 392 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 247/355 (69%), Positives = 297/355 (83%), Gaps = 5/355 (1%) Query: 41 PTTPVQPEGQAQGMQKSSFAAMPGWDRDALRDAWPAFLTSCQTLIRRSEWKNACTTARQV 100 P T + P ++ +++A +PGW +D LR+AWPAF SC LIRR WKNAC+ A V Sbjct: 43 PKTEIGPT-----LRPTTYATLPGWRQDNLREAWPAFAASCSVLIRRVNWKNACSAAANV 97 Query: 101 NADDKGAIRAFFESGFTPYKVFNPDGTDTGLVTGYYEPLLRGSRRRAGPYQTPLYQAPDD 160 + + AIR +FE+ F PY+V NPDG+D GLVTGYYEPLLRGSR+R GPYQTPL++ PDD Sbjct: 98 DTGNVDAIRQYFETYFIPYQVNNPDGSDNGLVTGYYEPLLRGSRKRGGPYQTPLHRVPDD 157 Query: 161 LLTIDMASVYPELKNLRLRGKVVGRKVVPYPTRAELMQGNSLSGKEIVWVDDPVEAFFLQ 220 +LTI++ASVYPELK +RLRG++VG KVV YP+RAE+ Q NSL+GKEI+WVDDP+EAFFLQ Sbjct: 158 ILTIELASVYPELKGMRLRGRLVGNKVVAYPSRAEMAQSNSLAGKEILWVDDPIEAFFLQ 217 Query: 221 VQGSGRVYLPESRETIRLAYADQNGRPYKSIGRYLVDKGEMELSQASAQNIKAWVQANPA 280 VQGSGRV L + +E +R+AYADQNG+PYKSIGRYLVDKGEM L QASAQ+IKAWV ANP Sbjct: 218 VQGSGRVQLADGKEIVRVAYADQNGQPYKSIGRYLVDKGEMTLDQASAQSIKAWVIANPT 277 Query: 281 RKEELLNANPSYVFFKEEKLPDPSKGPKGAQGIPLTPQRSIAIDPQHVPLGAPVFLATTL 340 R++ELLNANPSYVFFKEEK+ DPS GPKGA G+PLTPQRSIAIDPQ++P+GAPVFL+TT Sbjct: 278 RQQELLNANPSYVFFKEEKVTDPSVGPKGAMGVPLTPQRSIAIDPQYIPMGAPVFLSTTQ 337 Query: 341 PNSDRPLQRLVVAQDTGGAIRGVVRADYFWGFGDEAEDRAGAMKQRGMMWVLLPK 395 PNS+ LQRLV+AQDTGGAI+ VRADYFWGFG +A ++AG MKQRG MWVLLPK Sbjct: 338 PNSNALLQRLVMAQDTGGAIKNAVRADYFWGFGAQAGEQAGRMKQRGTMWVLLPK 392 >ref|YP_001098568.1| membrane-bound lytic murein transglycosylase [Herminiimonas arsenicoxydans] Length = 418 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 246/398 (61%), Positives = 306/398 (76%), Gaps = 18/398 (4%) Query: 14 ALAVIVAVSLAACTTTP-LPPAMRTPSKPTTPVQPE------GQAQGMQKS--------- 57 +L + + L +C+TTP PPA PS+P PV P + G+ ++ Sbjct: 23 SLLASILLGLVSCSTTPRQPPA--APSEPAVPVAPARPVPSPAELPGLPRTEINSALRPV 80 Query: 58 SFAAMPGWDRDALRDAWPAFLTSCQTLIRRSEWKNACTTARQVNADDKGAIRAFFESGFT 117 +FA +PGW D R+A PAFL SC LIRR +WK AC V+ D A R FFE+ F Sbjct: 81 TFAVLPGWKSDDQREALPAFLASCAVLIRRPDWKGACAAGANVDVSDDDAARKFFENYFV 140 Query: 118 PYKVFNPDGTDTGLVTGYYEPLLRGSRRRAGPYQTPLYQAPDDLLTIDMASVYPELKNLR 177 PY+V NPDG+ +G VTGYYEPLL+G+R+R G YQTPL+ APDD+LTI++ASV+PELK R Sbjct: 141 PYRVANPDGSLSGTVTGYYEPLLQGARKRGGRYQTPLHGAPDDILTIELASVFPELKGQR 200 Query: 178 LRGKVVGRKVVPYPTRAELMQGNSLSGKEIVWVDDPVEAFFLQVQGSGRVYLPESRETIR 237 +RG++VG KVV YP+RAEL + N+L+GKEI+WVDD ++AFFLQVQGSGRV L + +E +R Sbjct: 201 VRGRLVGNKVVAYPSRAELNKSNALAGKEILWVDDAIDAFFLQVQGSGRVQLDDGKEIVR 260 Query: 238 LAYADQNGRPYKSIGRYLVDKGEMELSQASAQNIKAWVQANPARKEELLNANPSYVFFKE 297 LAYADQNG+PYKSIGRYL+DKGE+ L QASAQ IKAWV+ANP R++ELLNANPSYVFF+E Sbjct: 261 LAYADQNGQPYKSIGRYLIDKGELTLDQASAQGIKAWVRANPKRQQELLNANPSYVFFRE 320 Query: 298 EKLPDPSKGPKGAQGIPLTPQRSIAIDPQHVPLGAPVFLATTLPNSDRPLQRLVVAQDTG 357 EK+ DP+ GPKGA G+PLTPQRSIA+DPQ++PLGAPVFL+TT PNS+ LQRLV+AQDTG Sbjct: 321 EKVTDPNVGPKGALGVPLTPQRSIAVDPQYIPLGAPVFLSTTQPNSNVALQRLVLAQDTG 380 Query: 358 GAIRGVVRADYFWGFGDEAEDRAGAMKQRGMMWVLLPK 395 AI+ VRADYFWGFG +A ++AG MKQRG MWVLLPK Sbjct: 381 SAIKNAVRADYFWGFGAQAGEQAGRMKQRGAMWVLLPK 418 >emb|CAL60439.2| Putative Membrane-bound lytic murein transglycosylase MltA family [Herminiimonas arsenicoxydans] Length = 402 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 246/398 (61%), Positives = 306/398 (76%), Gaps = 18/398 (4%) Query: 14 ALAVIVAVSLAACTTTP-LPPAMRTPSKPTTPVQPE------GQAQGMQKS--------- 57 +L + + L +C+TTP PPA PS+P PV P + G+ ++ Sbjct: 7 SLLASILLGLVSCSTTPRQPPA--APSEPAVPVAPARPVPSPAELPGLPRTEINSALRPV 64 Query: 58 SFAAMPGWDRDALRDAWPAFLTSCQTLIRRSEWKNACTTARQVNADDKGAIRAFFESGFT 117 +FA +PGW D R+A PAFL SC LIRR +WK AC V+ D A R FFE+ F Sbjct: 65 TFAVLPGWKSDDQREALPAFLASCAVLIRRPDWKGACAAGANVDVSDDDAARKFFENYFV 124 Query: 118 PYKVFNPDGTDTGLVTGYYEPLLRGSRRRAGPYQTPLYQAPDDLLTIDMASVYPELKNLR 177 PY+V NPDG+ +G VTGYYEPLL+G+R+R G YQTPL+ APDD+LTI++ASV+PELK R Sbjct: 125 PYRVANPDGSLSGTVTGYYEPLLQGARKRGGRYQTPLHGAPDDILTIELASVFPELKGQR 184 Query: 178 LRGKVVGRKVVPYPTRAELMQGNSLSGKEIVWVDDPVEAFFLQVQGSGRVYLPESRETIR 237 +RG++VG KVV YP+RAEL + N+L+GKEI+WVDD ++AFFLQVQGSGRV L + +E +R Sbjct: 185 VRGRLVGNKVVAYPSRAELNKSNALAGKEILWVDDAIDAFFLQVQGSGRVQLDDGKEIVR 244 Query: 238 LAYADQNGRPYKSIGRYLVDKGEMELSQASAQNIKAWVQANPARKEELLNANPSYVFFKE 297 LAYADQNG+PYKSIGRYL+DKGE+ L QASAQ IKAWV+ANP R++ELLNANPSYVFF+E Sbjct: 245 LAYADQNGQPYKSIGRYLIDKGELTLDQASAQGIKAWVRANPKRQQELLNANPSYVFFRE 304 Query: 298 EKLPDPSKGPKGAQGIPLTPQRSIAIDPQHVPLGAPVFLATTLPNSDRPLQRLVVAQDTG 357 EK+ DP+ GPKGA G+PLTPQRSIA+DPQ++PLGAPVFL+TT PNS+ LQRLV+AQDTG Sbjct: 305 EKVTDPNVGPKGALGVPLTPQRSIAVDPQYIPLGAPVFLSTTQPNSNVALQRLVLAQDTG 364 Query: 358 GAIRGVVRADYFWGFGDEAEDRAGAMKQRGMMWVLLPK 395 AI+ VRADYFWGFG +A ++AG MKQRG MWVLLPK Sbjct: 365 SAIKNAVRADYFWGFGAQAGEQAGRMKQRGAMWVLLPK 402