BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2030.p (453 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777402.1| sugar ABC transporter ATPase [Herbaspirillum... 783 0.0 ref|XP_002538221.1| sugar abc transporter, putative [Ricinus com... 727 0.0 ref|YP_001204029.1| putative ribose transport ATP-binding protei... 427 e-117 ref|YP_004140282.1| ABC transporter [Mesorhizobium ciceri biovar... 417 e-114 ref|YP_003911134.1| ABC transporter-like protein [Burkholderia s... 416 e-114 >ref|YP_003777402.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ65494.1| ABC-type sugar transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 502 Score = 783 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 397/453 (87%), Positives = 416/453 (91%), Gaps = 4/453 (0%) Query: 1 MNVLAGVLPGDDGQIIIDGQARQNYTTQAAYRLGVRCVFQELSLCQNLNVAENLCVFHPQ 60 MNVLAGVL DDGQI++DGQA+ YTTQ AYRLGVRCVFQELSLCQNLNVAENLCVFHP Sbjct: 54 MNVLAGVLASDDGQIVLDGQAQPAYTTQTAYRLGVRCVFQELSLCQNLNVAENLCVFHPS 113 Query: 61 LKGWGWRRRARKLVTEKLDDIFPGHGIDPDRIVGELSITQRQMVEIACAFTVVDAPVRLL 120 LKGWGWRRRAR+LVTEKLD+IFPGHGIDPDRIVGELSITQRQMVEIACAF VVDAPVRLL Sbjct: 114 LKGWGWRRRARRLVTEKLDEIFPGHGIDPDRIVGELSITQRQMVEIACAFVVVDAPVRLL 173 Query: 121 ILDEPTSSLDAQTAARLTAYIRRRLEDGMSLVFISHMLGEIFDCCNRIAVMRDGQLVLQD 180 ILDEPTSSLDAQTAARLTAYIR RLEDGMSLVFISHMLGEIFDCCN IAVMRDGQLVL D Sbjct: 174 ILDEPTSSLDAQTAARLTAYIRHRLEDGMSLVFISHMLGEIFDCCNYIAVMRDGQLVLSD 233 Query: 181 HTAHLTRDALVHAMGHADQKQIERQAEQQAQQESDSADVQSQQLLEVKLPAVSPVGALGV 240 +A+L+R+ALVHAMGHADQKQIERQ EQQ + AD +Q LLE+ LPA S V L V Sbjct: 234 QSANLSREALVHAMGHADQKQIERQVEQQVEH----ADSTAQSLLEIALPATSAVSTLAV 289 Query: 241 RRGQVVGLSGLAGQGQTEMLIRLFEQYRGKMRVAFVAGDRARDGNFPLWSILRNLSIREL 300 R+GQV+GLSGLAGQGQTEMLI+LFE+YRGKMRVAFVAGDRARDGNFPLWSIL NLSIREL Sbjct: 290 RQGQVIGLSGLAGQGQTEMLIQLFERYRGKMRVAFVAGDRARDGNFPLWSILGNLSIREL 349 Query: 301 PHLARGGVIDRAAEAELGRQWHERVAIRTPDLSNNILSLSGGNQQKVLFARALSSDAELI 360 PHLARGGV+DRAAE ELGRQWHERVAIRTPDL+NN+LSLSGGNQQKVLFARALSSDAELI Sbjct: 350 PHLARGGVVDRAAERELGRQWHERVAIRTPDLNNNMLSLSGGNQQKVLFARALSSDAELI 409 Query: 361 LMDDPMRGVDFGTKVDMYRLIRAEAARGRSFVWYTTENDELEYCDATYVFYQQQVTLKLA 420 LMDDPMRGVDFGTKVDMYRLIRAEAARGRSFVWYTTENDELEYCDATYVFYQQQVTLKLA Sbjct: 410 LMDDPMRGVDFGTKVDMYRLIRAEAARGRSFVWYTTENDELEYCDATYVFYQQQVTLKLA 469 Query: 421 RHELSEERIIAASFGNVRADGGTVTPPLEGARA 453 RHELSEERIIAASFGN RA PLEGARA Sbjct: 470 RHELSEERIIAASFGNARAAADAAAAPLEGARA 502 >ref|XP_002538221.1| sugar abc transporter, putative [Ricinus communis] gb|EEF24162.1| sugar abc transporter, putative [Ricinus communis] Length = 410 Score = 727 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 366/414 (88%), Positives = 385/414 (92%), Gaps = 4/414 (0%) Query: 1 MNVLAGVLPGDDGQIIIDGQARQNYTTQAAYRLGVRCVFQELSLCQNLNVAENLCVFHPQ 60 MNVLAGVL DDGQI++DGQA+ YTT AYRLGVRCVFQELSLCQNLNVAENLCVFHP Sbjct: 1 MNVLAGVLASDDGQIVLDGQAQPAYTTLTAYRLGVRCVFQELSLCQNLNVAENLCVFHPS 60 Query: 61 LKGWGWRRRARKLVTEKLDDIFPGHGIDPDRIVGELSITQRQMVEIACAFTVVDAPVRLL 120 LKGWGWRRRAR+LVTEKLD+IFPGHGIDPDRIVGELSITQRQMVEIACAF VVDAPVRLL Sbjct: 61 LKGWGWRRRARRLVTEKLDEIFPGHGIDPDRIVGELSITQRQMVEIACAFVVVDAPVRLL 120 Query: 121 ILDEPTSSLDAQTAARLTAYIRRRLEDGMSLVFISHMLGEIFDCCNRIAVMRDGQLVLQD 180 ILDEPTSSLDAQTAARLTAYIR RLEDGMSLVFISHMLGEIFDCCN IAVMRDGQLVL D Sbjct: 121 ILDEPTSSLDAQTAARLTAYIRHRLEDGMSLVFISHMLGEIFDCCNYIAVMRDGQLVLSD 180 Query: 181 HTAHLTRDALVHAMGHADQKQIERQAEQQAQQESDSADVQSQQLLEVKLPAVSPVGALGV 240 +A+L+R+ALVHAMGHAD KQIERQ EQQ + AD +Q LLE+ LPA S V +L V Sbjct: 181 QSANLSREALVHAMGHADHKQIERQVEQQVEH----ADSTAQSLLEIALPATSAVSSLAV 236 Query: 241 RRGQVVGLSGLAGQGQTEMLIRLFEQYRGKMRVAFVAGDRARDGNFPLWSILRNLSIREL 300 R+GQV+GLSGLAGQGQTEMLI+LFE+YRGKMRVAFVAGDRARDGNFPLWSILRNLSIREL Sbjct: 237 RQGQVIGLSGLAGQGQTEMLIQLFERYRGKMRVAFVAGDRARDGNFPLWSILRNLSIREL 296 Query: 301 PHLARGGVIDRAAEAELGRQWHERVAIRTPDLSNNILSLSGGNQQKVLFARALSSDAELI 360 PHLARGGV+DRAAE ELGRQWHERVAIRTPDLSNN+LSLSGGNQQKVLFARALSSDAELI Sbjct: 297 PHLARGGVVDRAAERELGRQWHERVAIRTPDLSNNMLSLSGGNQQKVLFARALSSDAELI 356 Query: 361 LMDDPMRGVDFGTKVDMYRLIRAEAARGRSFVWYTTENDELEYCDATYVFYQQQ 414 LMDDPMRGVDFGTKVDMYRLIRAEAARGRSFVWYTTENDELEYCDATYVFYQQQ Sbjct: 357 LMDDPMRGVDFGTKVDMYRLIRAEAARGRSFVWYTTENDELEYCDATYVFYQQQ 410 >ref|YP_001204029.1| putative ribose transport ATP-binding protein (rbsA) [Bradyrhizobium sp. ORS 278] emb|CAL75792.1| putative ribose transport ATP-binding protein (rbsA) [Bradyrhizobium sp. ORS 278] Length = 489 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 230/444 (51%), Positives = 288/444 (64%), Gaps = 17/444 (3%) Query: 1 MNVLAGVLPGDDGQIIIDGQARQNYTTQAAYRLGVRCVFQELSLCQNLNVAENLCVFHPQ 60 M++LAG D GQ+ I G NY A +LGVRCVFQELSLC NL VAEN VFHP Sbjct: 51 MHILAGTATADRGQLAIAGAVPANYAPGTAKQLGVRCVFQELSLCPNLTVAENTRVFHPS 110 Query: 61 LKGWGWRRRARKLVTEKLDDIFPGHGIDPDRIVGELSITQRQMVEIACAFTVVDAPVRLL 120 L G+ WRRRA +L+ +KLD IFPGHGI +V +L I +RQMVE+A AFTV D PVRL+ Sbjct: 111 LTGFTWRRRAARLILDKLDAIFPGHGIAASDLVQDLPIGRRQMVEVARAFTVTDEPVRLV 170 Query: 121 ILDEPTSSLDAQTAARLTAYIRRRLEDGMSLVFISHMLGEIFDCCNRIAVMRDGQLVLQD 180 ILDEPTSSLDA TA +L +++RR + +G+S +FISH+LGE+ C+RI VMRDG V Sbjct: 171 ILDEPTSSLDAHTAGQLLSFVRRAVGEGISCIFISHLLGEVLANCDRIVVMRDGTTVADA 230 Query: 181 HTAHLTRDALVHAMGHADQKQIERQAEQQAQQESDSADVQSQQLLEVKLPAV--SPVGAL 238 RD LV AMG + + +A Q ++ Q L V+ A S G L Sbjct: 231 PATAFDRDRLVAAMGDVELHARDVKAGQ--------GRLRGQSPLRVRARAARQSGAGEL 282 Query: 239 GVRRGQVVGLSGLAGQGQTEMLIRLFEQ-------YRGKMRVAFVAGDRARDGNFPLWSI 291 G+++GL+GLAG GQT +L+ +F VA VAGDR DG FPLWSI Sbjct: 283 VAHEGEIIGLAGLAGHGQTSLLLSIFAAATRATTGMEVTASVALVAGDRQADGIFPLWSI 342 Query: 292 LRNLSIRELPHLARGGVIDRAAEAELGRQWHERVAIRTPDLSNNILSLSGGNQQKVLFAR 351 N+ +R L L G +I R E EL W +++ IRTPD+ NNILSLSGGNQQK LFAR Sbjct: 343 AENIGVRSLHSLRHGLLISRRREHELAAHWRDKIRIRTPDIDNNILSLSGGNQQKALFAR 402 Query: 352 ALSSDAELILMDDPMRGVDFGTKVDMYRLIRAEAARGRSFVWYTTENDELEYCDATYVFY 411 AL SDA ++LMDDPMRGVD GTK+++Y LIRAEA GR+F+WYTTE DEL+ CD YVF Sbjct: 403 ALGSDARIVLMDDPMRGVDVGTKLEVYELIRAEADSGRTFLWYTTEFDELKQCDHVYVFR 462 Query: 412 QQQVTLKLARHELSEERIIAASFG 435 + L R EL+E+++I +SF Sbjct: 463 NDVIVADLTRDELTEQKVIQSSFA 486 >ref|YP_004140282.1| ABC transporter [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV10232.1| ABC transporter related protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 489 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 225/444 (50%), Positives = 297/444 (66%), Gaps = 15/444 (3%) Query: 1 MNVLAGVLPGDDGQIIIDGQARQNYTTQAAYRLGVRCVFQELSLCQNLNVAENLCVFHPQ 60 M+++AG L D GQI + G NY+ A +LG+RCVFQELSLC NLNVAEN + H Sbjct: 51 MHMVAGTLVPDSGQIGVHGDIEDNYSVSRAQQLGIRCVFQELSLCPNLNVAENTRINHAS 110 Query: 61 LKGWGWRRRARKLVTEKLDDIFPGHGIDPDRIVGELSITQRQMVEIACAFTVVDAPVRLL 120 L+G+GWRR+A +L+ KLD+IFPGH I IVG+LSI +RQMVE+A AFTV + L+ Sbjct: 111 LRGFGWRRKAAELIAAKLDEIFPGHSISASDIVGDLSIGRRQMVEVARAFTVTQDRLDLV 170 Query: 121 ILDEPTSSLDAQTAARLTAYIRRRLEDGMSLVFISHMLGEIFDCCNRIAVMRDGQLVLQD 180 ILDEPTSSLDA TA +L A++RR + G S + ISH+LGE+ +RI VMRDG++V+ D Sbjct: 171 ILDEPTSSLDAHTAGQLLAFVRRFVAGGKSCILISHVLGEVLRNADRIVVMRDGKVVVAD 230 Query: 181 HTAHLTRDALVHAMGHADQKQIERQAEQQAQQESDSADVQSQQLLEVKLPAVSPVGA-LG 239 R+ LV AMG A+ +Q A+ + V+++ PA G L Sbjct: 231 AATAFDRNRLVTAMGGAEARQKIAAQIAAAKPAASPLRVRAR-------PAAQKDGTDLV 283 Query: 240 VRRGQVVGLSGLAGQGQTEMLIRLF---EQYRGKMR----VAFVAGDRARDGNFPLWSIL 292 G+++GL+GLAG GQT++L+ +F + R + VA VAGDR DG FP WSI Sbjct: 284 ACAGEIIGLAGLAGHGQTDLLLAIFSGASRARAGIEVTAPVALVAGDRQSDGIFPQWSIA 343 Query: 293 RNLSIRELPHLARGGVIDRAAEAELGRQWHERVAIRTPDLSNNILSLSGGNQQKVLFARA 352 N+ IR L L G +I EAEL W +++ IRTPD++NNI SLSGGNQQK LFARA Sbjct: 344 ENIGIRSLARLRSGLLISPQREAELAAFWQKKIGIRTPDMNNNIFSLSGGNQQKALFARA 403 Query: 353 LSSDAELILMDDPMRGVDFGTKVDMYRLIRAEAARGRSFVWYTTENDELEYCDATYVFYQ 412 L SDA+++LMDDPMRGVD GTK+++Y L+R EAARGR+F+WYTTE +EL+ CD YVF Sbjct: 404 LGSDAQIVLMDDPMRGVDIGTKLEVYDLVREEAARGRTFLWYTTETEELDNCDHIYVFKN 463 Query: 413 QQVTLKLARHELSEERIIAASFGN 436 ++ L R EL+EE+II +SFG+ Sbjct: 464 GRIVANLRRDELTEEKIIQSSFGD 487 >ref|YP_003911134.1| ABC transporter-like protein [Burkholderia sp. CCGE1003] gb|ADN61843.1| ABC transporter related protein [Burkholderia sp. CCGE1003] Length = 493 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 229/440 (52%), Positives = 300/440 (68%), Gaps = 13/440 (2%) Query: 1 MNVLAGVLPGDDGQIIIDGQARQNYTTQAAYRLGVRCVFQELSLCQNLNVAENLCVFHPQ 60 M VLAGV G+I +DGQA +Y AA GVRCVFQELSLC NL VAEN+ + HPQ Sbjct: 56 MAVLAGVYAPTQGRIAVDGQAAPHYDANAARDAGVRCVFQELSLCANLTVAENMAIVHPQ 115 Query: 61 LKGWGWRRRARKLVTEKLDDIFPGHGIDPDRIVGELSITQRQMVEIACAFTVVDAPVRLL 120 L+G GWRR+A L+ EKL++IFPG+G+ + +V +L++TQ+QMVEIA FTV DAPVRL+ Sbjct: 116 LRGRGWRRKATALMREKLEEIFPGNGLKGNELVSDLTLTQQQMVEIARGFTVTDAPVRLV 175 Query: 121 ILDEPTSSLDAQTAARLTAYIRRRLEDGMSLVFISHMLGEIFDCCNRIAVMRDGQLVLQD 180 ILDEPTSSLDA TA +L A++RR + G++ V I+HMLGEI +R+ VMRDG +V Sbjct: 176 ILDEPTSSLDAHTAEQLLAFVRRAAQSGITCVLITHMLGEIERVADRVVVMRDGAIVGVL 235 Query: 181 HTAHLTRDALVHAMGHADQKQIERQAEQQAQQESDSADVQSQQLLEVKLPAVSPVGALGV 240 ++R A++ AMG +Q+E + A + D++ + V + V A Sbjct: 236 PREAVSRAAIIQAMG----QQLEAEKTPSAARVRDASGDERAFRWHVGPHKRTLVEA--- 288 Query: 241 RRGQVVGLSGLAGQGQTEMLIRLFEQYR----GKMRVAFVAGDRARDGNFPLWSILRNLS 296 RG++VG +GLAGQGQTE L+ ++E G+ +VAFVAGDR RDG FP+WSI +NL Sbjct: 289 SRGEIVGFAGLAGQGQTEALLSIYEAATRHGAGRTKVAFVAGDRGRDGVFPVWSIAQNLD 348 Query: 297 IREL--PHLARGGVIDRAAEAELGRQWHERVAIRTPDLSNNILSLSGGNQQKVLFARALS 354 +R L +R G++DR+A L W ++ IR +S ILSLSGGNQQKVLFARAL+ Sbjct: 349 VRWLFGGAKSRRGLVDRSAARALVEAWRAKIGIRGAPMSAGILSLSGGNQQKVLFARALA 408 Query: 355 SDAELILMDDPMRGVDFGTKVDMYRLIRAEAARGRSFVWYTTENDELEYCDATYVFYQQQ 414 SDA LILMDDP RGVD GTK D+Y+L+ EA +GR+F+WYTTEN+EL +CD TYVF Sbjct: 409 SDAALILMDDPTRGVDVGTKRDIYQLVHDEAQKGRTFIWYTTENEELSHCDRTYVFRSAA 468 Query: 415 VTLKLARHELSEERIIAASF 434 VT L E +EE ++AASF Sbjct: 469 VTRVLKADECTEEALLAASF 488