BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2029.p         (277 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI10120.1| hypothetical protein SBI_07000 [Streptomyces bing...    66   5e-09
ref|ZP_07798067.1| putative ATP-binding component of ABC transpo...    64   2e-08
ref|NP_105716.1| hypothetical protein mll4969 [Mesorhizobium lot...    62   1e-07
dbj|GAA19811.1| probable ATP-binding component of ABC transporte...    59   6e-07

>gb|ADI10120.1| hypothetical protein SBI_07000 [Streptomyces bingchenggensis BCW-1]
          Length = 765

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 79/240 (32%), Positives = 105/240 (43%), Gaps = 9/240 (3%)

Query: 2   GGVILQDQLSIAHDGNAIAAVKDLAQHVRDEDQAHTVFKTPANVGREPRCRLRIETGGRF 61
           GG  L D  ++A DG+A+A  + L Q V DED A  V    A+   E       E  GR 
Sbjct: 290 GGRDLGDAAAVAQDGDAVAEGRYLLQVVGDEDDADAVRAQGADDPEELVDLFGGEHRGRL 349

Query: 62  IEDQQAHRRIDHREGAGDFHHLALGDAEFADDAIG--IDAMAGEDVIELLRHQLARPAPP 119
           + DQ A  +    +  GD  HL  GDA+ A    G  +D  AG+     L H LA   P 
Sbjct: 350 VHDQDAGVQ---GQRLGDLDHLQPGDAQVAYAVGGGDVDPDAGQQFGGPLVHGLAVDQPQ 406

Query: 120 APALELRVKHAKVFGHVEVLAQGQFLEDAAHAQPVGGLRGVVLAGLTIDDDLAVVTGQHA 179
           +  L        V G  EV  + + L D    +P G L  V      +D+D A V    A
Sbjct: 407 SARL---APQEDVLGDAEVGDEVELLVDGGDPEPFGVLGAVDAHRGAVDEDAAAVGAVGA 463

Query: 180 GQHVHEGGLARAVVTDQAPAFAGLDVHAHILQRLDGTKGLADMRQAAQ-GGRGGMAGVHA 238
           G+H+ +  LAR V+  Q    A   +    ++R    +GLAD   A Q GGR   A  HA
Sbjct: 464 GEHLDQRALARTVLAQQDVHLAAAQIEVDAVERDHAGEGLADALHAQQLGGRAPCARRHA 523


>ref|ZP_07798067.1| putative ATP-binding component of ABC transporter [Pseudomonas
           aeruginosa 39016]
 gb|EFQ43163.1| putative ATP-binding component of ABC transporter [Pseudomonas
           aeruginosa 39016]
          Length = 452

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 87/202 (43%), Gaps = 9/202 (4%)

Query: 6   LQDQLSIAHDGNAIAAVKDLAQHVRDEDQAHTVFKTPANVGREPRCRLRIETGGRFIEDQ 65
           L    S A    A+A   DL Q V DE+   T+ +  A    +     R +  GR +EDQ
Sbjct: 43  LSGHPSAAQHRGALAERTDLGQLVADEEDTATLLRKTAQGDEDILGLARGQHRGRLVEDQ 102

Query: 66  QAHRRIDHREGAGDFHHLALGDAEFADDAIGIDAMAGEDVIELLRHQLARPAPPAPALEL 125
           QA       + A DFH LAL D +  D    +   A       LRH       PA A  L
Sbjct: 103 QADVL---HQAAHDFHPLALADGQPMDQPARLQRHA-----VALRHLANTRLQPARAARL 154

Query: 126 RVKHAK-VFGHVEVLAQGQFLEDAAHAQPVGGLRGVVLAGLTIDDDLAVVTGQHAGQHVH 184
             +  + V  H E L QG+ LE  A  Q  G  R   L  L +  DLA +   HA   +H
Sbjct: 155 GAEGERDVLRHAERLEQGEMLEHHADPQRPGASRVAHLHRLALPADLAGIGTGHAVDDLH 214

Query: 185 EGGLARAVVTDQAPAFAGLDVH 206
           +  LA AV+T+Q    AG+D  
Sbjct: 215 QRALAGAVLTEQGVDLAGVDAQ 236


>ref|NP_105716.1| hypothetical protein mll4969 [Mesorhizobium loti MAFF303099]
 dbj|BAB51502.1| mll4969 [Mesorhizobium loti MAFF303099]
          Length = 770

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 9/223 (4%)

Query: 9   QLSIAHDGNAIAAVKDLAQHVRDEDQAHTVFKTPANVGREPRCRLRIETGGRFIEDQQAH 68
           Q ++A   +A+    DL Q VR+ED A  V     +   +       + G R +ED Q  
Sbjct: 538 QHAVAQHDDAVGDTLDLVQAVRNEDDADAVGLQRLDDVEQFVGLGERQAGCRLVEDDQP- 596

Query: 69  RRIDHREGAGDFHHLALGDAEFADDAIGIDAMAGEDVIELLRHQLARPAP----PAPALE 124
                R+  GD  HL L   + +D  IG     G D ++  RH LA+         P  +
Sbjct: 597 --CLDRQRLGDLDHLLLRQRQGSDLRIG--GEIGADALQERRHHLAQLRAVDEFQRPGAQ 652

Query: 125 LRVKHAKVFGHVEVLAQGQFLEDAAHAQPVGGLRGVVLAGLTIDDDLAVVTGQHAGQHVH 184
                  V G VE+  Q +FL D   A+         L G  +D D A V    A + +H
Sbjct: 653 RLAAEEDVGGDVEIFEQIEFLVDEGDARTQAAFDTQPLMGGAVDRDRAGVRRGDAAEDLH 712

Query: 185 EGGLARAVVTDQAPAFAGLDVHAHILQRLDGTKGLADMRQAAQ 227
           +G LA AV+ DQA   A  D+H   +QR D   GLA   +A +
Sbjct: 713 QGRLAGAVLADQADDLARPDLHGEAIQRDDARIGLAHALEAEE 755


>dbj|GAA19811.1| probable ATP-binding component of ABC transporter [Pseudomonas
           aeruginosa NCMG1179]
          Length = 452

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 84/202 (41%), Gaps = 9/202 (4%)

Query: 6   LQDQLSIAHDGNAIAAVKDLAQHVRDEDQAHTVFKTPANVGREPRCRLRIETGGRFIEDQ 65
           L    S A    A+A   DL Q V DE+    +F+  A    E       +   R +EDQ
Sbjct: 43  LSGHPSAAQHRGALAERTDLGQLVADEEDTAALFRKTAQGDEEILGLAWGQHRSRLVEDQ 102

Query: 66  QAHRRIDHREGAGDFHHLALGDAEFADDAIGIDAMAGEDVIELLRHQLARPAPPAPALEL 125
           QA       + A D H LAL D +  D    +   A       LRH       PA A  L
Sbjct: 103 QADVL---HQAAHDLHPLALSDGQPMDQPARLQRHA-----VALRHLANTRLQPARAARL 154

Query: 126 RVKHAK-VFGHVEVLAQGQFLEDAAHAQPVGGLRGVVLAGLTIDDDLAVVTGQHAGQHVH 184
             +  + V  H E L QG+ LE  A  Q  G  R   L  L +  DLA +   HA   +H
Sbjct: 155 GAEGERDVLRHAERLEQGEMLEHHADPQRPGASRVAHLHRLALPADLAGIGTGHAVDDLH 214

Query: 185 EGGLARAVVTDQAPAFAGLDVH 206
           +  LA AV+T+Q    AG+D  
Sbjct: 215 QRALAGAVLTEQGVDLAGVDAQ 236