BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2019.p         (256 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_621108.1| hypothetical protein Bcen_1228 [Burkholderia ce...   344   6e-93
gb|EGH72590.1| hypothetical protein PSYAR_18715 [Pseudomonas syr...    70   4e-10
gb|EGH33388.1| hypothetical protein PSYJA_32506 [Pseudomonas syr...    68   1e-09
ref|ZP_06500452.1| hypothetical protein PsyrpsF_40067 [Pseudomon...    68   1e-09
gb|EGH47217.1| hypothetical protein PSYPI_35110 [Pseudomonas syr...    68   1e-09

>ref|YP_621108.1| hypothetical protein Bcen_1228 [Burkholderia cenocepacia AU 1054]
 ref|YP_840227.1| hypothetical protein Bcen2424_6604 [Burkholderia cenocepacia
           HI2424]
 gb|ABF76135.1| hypothetical protein Bcen_1228 [Burkholderia cenocepacia AU 1054]
 gb|ABK13334.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424]
          Length = 260

 Score =  344 bits (883), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 160/240 (66%), Positives = 193/240 (80%)

Query: 17  TSAVLAENFSATNINYLVTNRAKPDGIYGYGTSNQNLQTFQFEHFRGTDWGDVYFDAELY 76
           +++ +A+NF+  N N+L TNR+ PD IYGYGT N NLQT+QFEHF G  +GD+YFDAELY
Sbjct: 21  STSAMAQNFAVNNFNFLYTNRSSPDPIYGYGTGNGNLQTYQFEHFSGNQFGDIYFDAELY 80

Query: 77  QGKHVGSPVSTNDSQQLLVLNPRLSLSKITGKSFAFGPVSDVSLIARWERGSYPDTDHFR 136
            G +VG+P S  + Q LLV NPRLS  K  GK  + GP+SDVSLIARWERGSYPDTDHF 
Sbjct: 81  HGNNVGAPFSNANFQNLLVFNPRLSFGKTLGKDLSVGPISDVSLIARWERGSYPDTDHFE 140

Query: 137 SQNYGVSLNFDVPGFDYFESGLLYRNTNFDPRTWLWRSVLMSKPVDVAGQKLHFNLLSLI 196
           SQNYG+SLNF VPGF +FESG+LYRNTNFD  TWLWRSVL+S P++V GQK HFNLLSLI
Sbjct: 141 SQNYGLSLNFKVPGFAWFESGMLYRNTNFDKHTWLWRSVLLSNPIEVGGQKFHFNLLSLI 200

Query: 197 NGSAHNGTEVFERADVLWEIGGKAEYQFGLRLEYARYQNDPLGSGTYKRFMPQLMFKLSL 256
           NGS HNGTEVFERA++LWEI GK +YQ G R E+  Y N+P+G GTY ++MP++MFK +L
Sbjct: 201 NGSNHNGTEVFERAELLWEIFGKPQYQLGARFEFMHYNNNPVGGGTYNKYMPEIMFKYTL 260


>gb|EGH72590.1| hypothetical protein PSYAR_18715 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 261

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 9/120 (7%)

Query: 46  YGTSNQNLQTFQFEHFRGTDWGDVYF--DAELYQGKHVGSPVSTNDSQQLLVLNPRLSLS 103
           +  + +N QTF FEH     +GD +F  D   Y GK      +T D+      +PRLSL 
Sbjct: 41  FAVNPENQQTFTFEHADSWKYGDNFFFVDKIFYNGK---KDATTGDNTYYGEFSPRLSLG 97

Query: 104 KITGKSFAFGPVSDVSLIARWERGSYPDTDHFRSQNYGVSLNFDVPGFDYFESGLLYRNT 163
           KI G+ F FGP+SDV + A +E G   +  +      G + +  +PGFDYF+     R T
Sbjct: 98  KIFGQKFEFGPISDVLIAATYEFGEGDNESYL----IGPAFDLKIPGFDYFQLNFYQRQT 153


>gb|EGH33388.1| hypothetical protein PSYJA_32506 [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 261

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 9/120 (7%)

Query: 46  YGTSNQNLQTFQFEHFRGTDWGDVYF--DAELYQGKHVGSPVSTNDSQQLLVLNPRLSLS 103
           +  + +N QTF FEH     +GD +F  D   Y GK      +  D+      +PRLSL 
Sbjct: 41  FAVNPENQQTFTFEHADSWKYGDNFFFVDKIFYNGK---KDATVGDNTYYGEFSPRLSLG 97

Query: 104 KITGKSFAFGPVSDVSLIARWERGSYPDTDHFRSQNYGVSLNFDVPGFDYFESGLLYRNT 163
           KI G+ F FGP+SDV + A +E G   +  +      G + +  +PGFDYF+     R T
Sbjct: 98  KIFGQKFEFGPISDVLIAATYEFGEGDNESYL----IGPAFDLKIPGFDYFQLNFYQRQT 153


>ref|ZP_06500452.1| hypothetical protein PsyrpsF_40067 [Pseudomonas syringae pv.
           syringae FF5]
          Length = 247

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 9/120 (7%)

Query: 46  YGTSNQNLQTFQFEHFRGTDWGDVYF--DAELYQGKHVGSPVSTNDSQQLLVLNPRLSLS 103
           +  + +N QTF FEH     +GD +F  D   Y GK      +  D+      +PRLSL 
Sbjct: 27  FAVNPENQQTFTFEHADSWKYGDNFFFVDKIFYNGK---KDATAGDNTYYGEFSPRLSLG 83

Query: 104 KITGKSFAFGPVSDVSLIARWERGSYPDTDHFRSQNYGVSLNFDVPGFDYFESGLLYRNT 163
           KI G+ F FGP+SDV + A +E G   +  +      G + +  +PGFDYF+     R T
Sbjct: 84  KIFGQKFEFGPISDVLIAATYEFGEGDNESYL----IGPAFDLKIPGFDYFQLNFYQRQT 139


>gb|EGH47217.1| hypothetical protein PSYPI_35110 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 249

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 9/120 (7%)

Query: 46  YGTSNQNLQTFQFEHFRGTDWGDVYF--DAELYQGKHVGSPVSTNDSQQLLVLNPRLSLS 103
           +  + +N QTF FEH     +GD +F  D   Y GK      +  D+      +PRLSL 
Sbjct: 29  FAVNPENQQTFTFEHADSWKYGDNFFFVDKIFYNGK---KDATAGDNTYYGEFSPRLSLG 85

Query: 104 KITGKSFAFGPVSDVSLIARWERGSYPDTDHFRSQNYGVSLNFDVPGFDYFESGLLYRNT 163
           KI G+ F FGP+SDV + A +E G   +  +      G + +  +PGFDYF+     R T
Sbjct: 86  KIFGQKFEFGPISDVLIAATYEFGEGDNESYL----IGPAFDLKIPGFDYFQLNFYQRQT 141