BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1990.p (279 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004230836.1| Ureidoglycolate lyase [Burkholderia sp. CCGE... 394 e-107 ref|YP_299996.1| 5-carboxymethyl-2-hydroxymuconate delta-isomera... 391 e-107 ref|YP_004474113.1| Ureidoglycolate lyase [Pseudomonas fulva 12-... 385 e-105 ref|YP_004354993.1| ureidoglycolate lyase [Pseudomonas brassicac... 385 e-105 ref|YP_002873658.1| putative dioxygenase [Pseudomonas fluorescen... 374 e-102 >ref|YP_004230836.1| Ureidoglycolate lyase [Burkholderia sp. CCGE1001] gb|ADX57776.1| Ureidoglycolate lyase [Burkholderia sp. CCGE1001] Length = 284 Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 193/282 (68%), Positives = 217/282 (76%), Gaps = 4/282 (1%) Query: 1 MKFASFRHQGKDSFGLVTGEQVIDLGHAGA---GSLKQYLARGGAARAQQDAEQGRA-LA 56 MK S RH +SFG+ E VI L + +LK+ LAR + + + + L Sbjct: 1 MKLVSIRHADSNSFGVALEEGVIGLAPFASDVGSTLKEALARNSLSAIEAIGRETQCILP 60 Query: 57 IAEVQFLPVIPDPEKILCVGINYLSHVKETGRELPKHPMIFARFADSQTGHLQPIIRPHA 116 +EV+ LPV+PDP+KILCVGINY++HVKETGRE+P PM F RFADSQT H PI+RP A Sbjct: 61 WSEVELLPVVPDPDKILCVGINYMTHVKETGREIPTKPMFFTRFADSQTAHDAPIVRPLA 120 Query: 117 SEKLDFEGELAVVIGRKARHIKAAEALDYVAGYACYNDGSVRDWQKHTIQFIPGKNFPQT 176 S KLDFEGELAVVIGR ARH+KAA A DYVAGY+CYNDGSVRDWQ+HTIQF PGKNFP T Sbjct: 121 SHKLDFEGELAVVIGRTARHVKAANAFDYVAGYSCYNDGSVRDWQRHTIQFTPGKNFPST 180 Query: 177 GGFGPWLVTPDEAGDPSQLSLVTRLNGTVVQEARTDDLIFPIPALIEYCSTFTELNPGDV 236 G FGPWLVT DE GDPSQLSLVTRLNG VVQ+A DLIF IP LIEYCSTFT L PGDV Sbjct: 181 GSFGPWLVTADEVGDPSQLSLVTRLNGEVVQQASLSDLIFDIPTLIEYCSTFTVLRPGDV 240 Query: 237 IITGTTGGVGAFREPPLWMKPGDVVEVEISGLGKLVNPVAQE 278 IITGTTGGVGAFREPPLWMKPGD+VEVEIS +G L N +A E Sbjct: 241 IITGTTGGVGAFREPPLWMKPGDIVEVEISKVGVLRNTIADE 282 >ref|YP_299996.1| 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Ralstonia eutropha JMP134] gb|AAZ65152.1| 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Ralstonia eutropha JMP134] Length = 282 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 194/282 (68%), Positives = 220/282 (78%), Gaps = 4/282 (1%) Query: 1 MKFASFRHQGKDSFGLVTGEQVIDLG-HAGA--GSLKQYLARGGAARAQQDAEQG-RALA 56 MK SF H G+ SFG+V G+ V+DL HA A SL++ L++G + A+ G +A Sbjct: 1 MKLVSFEHAGRASFGVVLGDAVLDLAPHAAAVGQSLREALSKGALGSIAEIAKDGGTTIA 60 Query: 57 IAEVQFLPVIPDPEKILCVGINYLSHVKETGRELPKHPMIFARFADSQTGHLQPIIRPHA 116 + +V+ +PVIPDP KILCVGINY SHVKETGRE+PK+PM F RFADSQ H QPIIRP A Sbjct: 61 LDKVRLMPVIPDPAKILCVGINYASHVKETGREMPKYPMFFTRFADSQVAHDQPIIRPRA 120 Query: 117 SEKLDFEGELAVVIGRKARHIKAAEALDYVAGYACYNDGSVRDWQKHTIQFIPGKNFPQT 176 S+KLDFEGELAVVIGR ARH+ +AL+YVAGY+CYNDGSVRDWQKHTIQF PGKNFPQT Sbjct: 121 SQKLDFEGELAVVIGRTARHVPGEQALNYVAGYSCYNDGSVRDWQKHTIQFTPGKNFPQT 180 Query: 177 GGFGPWLVTPDEAGDPSQLSLVTRLNGTVVQEARTDDLIFPIPALIEYCSTFTELNPGDV 236 G GPWLVT DE DPS LSL TRLNG VVQ A TDDLIF + +I YCSTFTEL GDV Sbjct: 181 GALGPWLVTTDEIRDPSALSLTTRLNGEVVQAATTDDLIFSVSEVIAYCSTFTELRAGDV 240 Query: 237 IITGTTGGVGAFREPPLWMKPGDVVEVEISGLGKLVNPVAQE 278 IITGTTGGVGAFREPPLWMKPGDVVEVEIS +G L N + E Sbjct: 241 IITGTTGGVGAFREPPLWMKPGDVVEVEISKIGVLRNTIQDE 282 >ref|YP_004474113.1| Ureidoglycolate lyase [Pseudomonas fulva 12-X] gb|AEF22019.1| Ureidoglycolate lyase [Pseudomonas fulva 12-X] Length = 282 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 187/283 (66%), Positives = 220/283 (77%), Gaps = 6/283 (2%) Query: 1 MKFASFRHQGKDSFGLVTGEQVIDLGHAGAG---SLKQYLARGGAARAQQD--AEQGRAL 55 MK ASF HQG+DS+G+V+G+++IDL A LKQ +A D AE R L Sbjct: 1 MKIASFTHQGRDSYGIVSGDEIIDLHELKASIGQDLKQAIAGNRLVELSADSLAELPR-L 59 Query: 56 AIAEVQFLPVIPDPEKILCVGINYLSHVKETGRELPKHPMIFARFADSQTGHLQPIIRPH 115 +A++QFLPVI P KILC+GINY +H++ETGRE P +PMIF RFADSQT H QPI+RP Sbjct: 60 NLADIQFLPVITHPGKILCIGINYATHMRETGRETPVYPMIFTRFADSQTAHEQPILRPK 119 Query: 116 ASEKLDFEGELAVVIGRKARHIKAAEALDYVAGYACYNDGSVRDWQKHTIQFIPGKNFPQ 175 AS KLDFEGELAVVIG+ ARH+K A+ALDYVAGY+CYNDGSVRDWQKHTIQF+PGKNFPQ Sbjct: 120 ASHKLDFEGELAVVIGKTARHVKEADALDYVAGYSCYNDGSVRDWQKHTIQFVPGKNFPQ 179 Query: 176 TGGFGPWLVTPDEAGDPSQLSLVTRLNGTVVQEARTDDLIFPIPALIEYCSTFTELNPGD 235 TGGFGPWLVT DE DP L L TRLNG ++Q T D+IF + LIEYC+ FTEL PGD Sbjct: 180 TGGFGPWLVTADEIPDPQTLELTTRLNGEIMQHTSTADMIFDVRKLIEYCTAFTELAPGD 239 Query: 236 VIITGTTGGVGAFREPPLWMKPGDVVEVEISGLGKLVNPVAQE 278 VI++GTTGGVGAFREP +WMKPGDVVEVEI+ +G L N +A E Sbjct: 240 VIVSGTTGGVGAFREPQVWMKPGDVVEVEIASIGILRNTIADE 282 >ref|YP_004354993.1| ureidoglycolate lyase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA69989.1| putative ureidoglycolate lyase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 283 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 188/283 (66%), Positives = 219/283 (77%), Gaps = 6/283 (2%) Query: 1 MKFASFRHQGKDSFGLVTGEQVIDLGHAG---AGSLKQYLA--RGGAARAQQDAEQGRAL 55 MK ASF QG+ S+G+V G+Q+IDL LKQ + R + A R + Sbjct: 1 MKLASFIVQGRSSYGVVEGDQIIDLESLKPTLGSDLKQAIGHNRLNELSTARLASLPR-I 59 Query: 56 AIAEVQFLPVIPDPEKILCVGINYLSHVKETGRELPKHPMIFARFADSQTGHLQPIIRPH 115 +A+V FLPVIP+P K+LC+GINY +HV+ETGRE+P +PMIF RFADSQT HLQPI+RP Sbjct: 60 PLADVTFLPVIPNPGKVLCIGINYATHVRETGREMPTYPMIFTRFADSQTAHLQPIVRPT 119 Query: 116 ASEKLDFEGELAVVIGRKARHIKAAEALDYVAGYACYNDGSVRDWQKHTIQFIPGKNFPQ 175 AS KLDFEGELAVVIG+ ARH+K A+ALDYVAGYACYNDGSVRDWQKHTIQF+PGKNFP Sbjct: 120 ASHKLDFEGELAVVIGKAARHVKPADALDYVAGYACYNDGSVRDWQKHTIQFVPGKNFPN 179 Query: 176 TGGFGPWLVTPDEAGDPSQLSLVTRLNGTVVQEARTDDLIFPIPALIEYCSTFTELNPGD 235 TGGFGPWLVT DE GDP L L TRLNG V+Q RT D+IF + LIEYCSTFTEL PGD Sbjct: 180 TGGFGPWLVTGDEIGDPQDLELTTRLNGEVMQHTRTSDMIFDVRQLIEYCSTFTELAPGD 239 Query: 236 VIITGTTGGVGAFREPPLWMKPGDVVEVEISGLGKLVNPVAQE 278 VI+TGTTGGVGAFREPP+WMKPGD VE+EI+ +G L N + E Sbjct: 240 VIVTGTTGGVGAFREPPVWMKPGDEVEIEIARIGTLRNSIVDE 282 >ref|YP_002873658.1| putative dioxygenase [Pseudomonas fluorescens SBW25] emb|CAY50574.1| putative dioxygenase [Pseudomonas fluorescens SBW25] Length = 283 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 183/285 (64%), Positives = 215/285 (75%), Gaps = 10/285 (3%) Query: 1 MKFASFRHQGKDSFGLVTGEQVIDLGHAG---AGSLKQYLARGGAARAQQDAEQGRA--- 54 MK ASF G+ ++G+V G+Q+IDL LK +A A R + A Sbjct: 1 MKLASFSVHGRTTYGVVDGDQLIDLESVKPTFGPDLKHAIA---ANRLVELTPAVLAPLP 57 Query: 55 -LAIAEVQFLPVIPDPEKILCVGINYLSHVKETGRELPKHPMIFARFADSQTGHLQPIIR 113 + +A+V FLPVI +P K+LC+GINY +HV+ETGR++P +PMIF RFADSQ HLQPIIR Sbjct: 58 RVPVADVTFLPVIANPGKVLCIGINYATHVRETGRDMPTYPMIFTRFADSQVAHLQPIIR 117 Query: 114 PHASEKLDFEGELAVVIGRKARHIKAAEALDYVAGYACYNDGSVRDWQKHTIQFIPGKNF 173 P S KLDFEGELAVVI + ARH+ AA+ALDYVAGYACYNDGSVRDWQKHT+QF+PGKNF Sbjct: 118 PKVSHKLDFEGELAVVISKTARHVNAADALDYVAGYACYNDGSVRDWQKHTLQFVPGKNF 177 Query: 174 PQTGGFGPWLVTPDEAGDPSQLSLVTRLNGTVVQEARTDDLIFPIPALIEYCSTFTELNP 233 P TGGFGPWLVT DE DP L L TRLNG V+Q RT D+IF + LIEYCSTFTEL P Sbjct: 178 PHTGGFGPWLVTRDEISDPQNLELTTRLNGEVMQHTRTSDMIFDVRQLIEYCSTFTELAP 237 Query: 234 GDVIITGTTGGVGAFREPPLWMKPGDVVEVEISGLGKLVNPVAQE 278 GDVI++GTTGGVGAFREPP+WMKPGD VEVEISG+G L N +A E Sbjct: 238 GDVIVSGTTGGVGAFREPPVWMKPGDTVEVEISGIGLLRNSIADE 282