BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1978.p (257 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004230822.1| short-chain dehydrogenase/reductase SDR [Bur... 421 e-116 ref|YP_003592843.1| short-chain dehydrogenase/reductase SDR [Cau... 375 e-102 ref|YP_003487185.1| oxidoreductase [Streptomyces scabiei 87.22] ... 296 2e-78 gb|ADZ31222.1| ScgX [Streptomyces chattanoogensis] 217 1e-54 ref|YP_004014358.1| short-chain dehydrogenase/reductase SDR [Fra... 215 4e-54 >ref|YP_004230822.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1001] gb|ADX57762.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1001] Length = 257 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 244/257 (94%), Positives = 249/257 (96%) Query: 1 MADLKGKVAFVTGASRGIGREIATRLAANGATVAIHYGGNLQAAQETLATIEQTGGRAFV 60 MADLKGKVAFVTGASRGIGREIATRLAANGATVA+HYG NLQAAQETLATIE+ GGRAFV Sbjct: 1 MADLKGKVAFVTGASRGIGREIATRLAANGATVAVHYGANLQAAQETLATIERAGGRAFV 60 Query: 61 IQADLHSSDASFAATFEEFDRSLLTCSGQTGLDILVNNAGQIMFGSVEVLSSAEFDKAFA 120 IQADLH+SD SF A FEEFDRSL TCSGQ GLDILVNNAGQIMFGSVEVLSSAEFDKAFA Sbjct: 61 IQADLHASDGSFTAMFEEFDRSLSTCSGQAGLDILVNNAGQIMFGSVEVLSSAEFDKAFA 120 Query: 121 VDVKAPFFLTQAALPRLRDGGRIINISSGTSRIVNPNVVSYAMAKGALEVFSKTAALQLG 180 VDVKAPFFLTQAALPRLRDGGRIINISSGTSRIVNP+VVSYAMAKGALEVFSKTAALQLG Sbjct: 121 VDVKAPFFLTQAALPRLRDGGRIINISSGTSRIVNPDVVSYAMAKGALEVFSKTAALQLG 180 Query: 181 ARGITVNAVAPGPTATAEFLRMAEGNPAFIEHAKAQSALRRLGTPEDIANIVAFLASDEG 240 ARGITVNAVAPGPTATAEFLRMAEGNPAFIEHAKAQSALRRLGTP DIANIVAFLASDEG Sbjct: 181 ARGITVNAVAPGPTATAEFLRMAEGNPAFIEHAKAQSALRRLGTPADIANIVAFLASDEG 240 Query: 241 GWITGQVIDATGGSLLG 257 GWITGQ+IDATGGSLLG Sbjct: 241 GWITGQLIDATGGSLLG 257 >ref|YP_003592843.1| short-chain dehydrogenase/reductase SDR [Caulobacter segnis ATCC 21756] gb|ADG10225.1| short-chain dehydrogenase/reductase SDR [Caulobacter segnis ATCC 21756] Length = 257 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 205/257 (79%), Positives = 228/257 (88%) Query: 1 MADLKGKVAFVTGASRGIGREIATRLAANGATVAIHYGGNLQAAQETLATIEQTGGRAFV 60 MADL GKVA VTGASRGIGREIA RLAA+GATVA+HYG NL AA+ET+ATI + GGR F Sbjct: 1 MADLAGKVALVTGASRGIGREIAKRLAADGATVAVHYGANLAAAEETVATIVEAGGRGFA 60 Query: 61 IQADLHSSDASFAATFEEFDRSLLTCSGQTGLDILVNNAGQIMFGSVEVLSSAEFDKAFA 120 IQADLH+ + S A FE+FDR L CSGQ+GLDI+VNNAGQIMFG+V+VL FDKAFA Sbjct: 61 IQADLHTPETSLAKMFEDFDRGLNLCSGQSGLDIIVNNAGQIMFGAVDVLRPEAFDKAFA 120 Query: 121 VDVKAPFFLTQAALPRLRDGGRIINISSGTSRIVNPNVVSYAMAKGALEVFSKTAALQLG 180 VDVKAPFF+ Q ALPRLRDGGRIINISSGTSR+VNP+VVSYAMAKGALEVFSKT A QLG Sbjct: 121 VDVKAPFFIVQGALPRLRDGGRIINISSGTSRVVNPDVVSYAMAKGALEVFSKTIAQQLG 180 Query: 181 ARGITVNAVAPGPTATAEFLRMAEGNPAFIEHAKAQSALRRLGTPEDIANIVAFLASDEG 240 RG+TVN+VAPGPTAT EFLRMA+GNP+F+EHAK+QSALRRLG P DIANIVAFLASDEG Sbjct: 181 PRGVTVNSVAPGPTATEEFLRMAQGNPSFVEHAKSQSALRRLGAPADIANIVAFLASDEG 240 Query: 241 GWITGQVIDATGGSLLG 257 GWITGQ+IDATGG+LLG Sbjct: 241 GWITGQLIDATGGTLLG 257 >ref|YP_003487185.1| oxidoreductase [Streptomyces scabiei 87.22] emb|CBG68619.1| putative oxidoreductase [Streptomyces scabiei 87.22] Length = 257 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 168/257 (65%), Positives = 196/257 (76%) Query: 1 MADLKGKVAFVTGASRGIGREIATRLAANGATVAIHYGGNLQAAQETLATIEQTGGRAFV 60 M L GKVA VTGASRGIGR IA RLAA+GA V IHYG + + A+ETLA IE GG + Sbjct: 1 MPRLAGKVALVTGASRGIGRAIACRLAADGAFVVIHYGKSEEGARETLAMIEAEGGSGCI 60 Query: 61 IQADLHSSDASFAATFEEFDRSLLTCSGQTGLDILVNNAGQIMFGSVEVLSSAEFDKAFA 120 +QADL S FE D L+ LDILVNNAGQ++ G++E ++ A+FD AF Sbjct: 61 VQADLGKPAQSVIPMFEAIDGELMGRQSGKDLDILVNNAGQMVIGTIETITEAQFDDAFT 120 Query: 121 VDVKAPFFLTQAALPRLRDGGRIINISSGTSRIVNPNVVSYAMAKGALEVFSKTAALQLG 180 VDVKAPFF+TQAAL RLRDGGRIINISSGT+R+VNP V++YAMAKG LEVFSKT AL LG Sbjct: 121 VDVKAPFFITQAALARLRDGGRIINISSGTARVVNPGVIAYAMAKGVLEVFSKTLALHLG 180 Query: 181 ARGITVNAVAPGPTATAEFLRMAEGNPAFIEHAKAQSALRRLGTPEDIANIVAFLASDEG 240 R ITVN VAPGPT T EFLRM+ G+P F++ A AQSAL R+GTPE+IA+IVAF+AS E Sbjct: 181 QRQITVNTVAPGPTGTEEFLRMSAGDPGFVKQAAAQSALGRIGTPEEIADIVAFVASGES 240 Query: 241 GWITGQVIDATGGSLLG 257 WITGQVIDATGG+ LG Sbjct: 241 SWITGQVIDATGGTFLG 257 >gb|ADZ31222.1| ScgX [Streptomyces chattanoogensis] Length = 254 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 129/256 (50%), Positives = 163/256 (63%), Gaps = 2/256 (0%) Query: 1 MADLKGKVAFVTGASRGIGREIATRLAANGATVAIHYGGNLQAAQETLATIEQTGGRAFV 60 M DL GK A VTG+SRGIGR IA RLA +GA VA+HY + AA+ETL +I GG+AF Sbjct: 1 MGDLNGKTALVTGSSRGIGRTIAQRLARDGALVAVHYNSDDTAAKETLESIRAAGGQAFA 60 Query: 61 IQADLHSSDASFAATFEEFDRSLLTCSGQTGLDILVNNAGQIMFGSVEVLSSAEFDKAFA 120 ++A+L A F FD L G+ GLD+LVNNAG ++ + +FD+ A Sbjct: 61 LRAEL-GVPGDAADLFTAFDTELAAYGGEPGLDVLVNNAGTRFRARIDEATEEDFDRTIA 119 Query: 121 VDVKAPFFLTQAALPRLRDGGRIINISSGTSRIVNPNVVSYAMAKGALEVFSKTAALQLG 180 V+VKAPFFL Q L R+RDGGRIIN+SS +RI +P ++Y++AKG LE ++T A LG Sbjct: 120 VNVKAPFFLIQHGLRRMRDGGRIINVSSAVTRIAHPPQIAYSVAKGGLETLTRTLAKDLG 179 Query: 181 ARGITVNAVAPGPTATAEFLRMAEGNPAFIEHAKAQSALRRLGTPEDIANIVAFLASDEG 240 RGITVNA+APG T P A S RLG+P DIA++ AFLASD+ Sbjct: 180 ERGITVNAIAPGYVET-HVTEARTATPEGRAALAAYSVFNRLGSPADIADVAAFLASDDS 238 Query: 241 GWITGQVIDATGGSLL 256 WITGQ ID TGGS+L Sbjct: 239 RWITGQCIDVTGGSML 254 >ref|YP_004014358.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EuI1c] gb|ADP78488.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EuI1c] Length = 257 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 133/260 (51%), Positives = 170/260 (65%), Gaps = 9/260 (3%) Query: 1 MADLKGKVAFVTGASRGIGREIATRLAANGATVAIHYGGNLQAAQETLATIEQTGGRAFV 60 M L K A VTGASRGIGR +A RLA GA VA+HYG N AA++T+ TI GGRAF Sbjct: 1 MGTLAAKTALVTGASRGIGRAVALRLAREGALVAVHYGSNEAAAKDTVDTITAAGGRAFA 60 Query: 61 IQADL-HSSDASFAATFEEFDRSLLTCSGQTGLDILVNNAGQIMFGSVEVLSSAEFDKAF 119 ++ L H+ DA A + FD ++ + +D++VNNAG ++ +V + FD+ F Sbjct: 61 LRTHLGHAGDAE--ALWSAFDDAIRAHTDSPAVDVIVNNAGIALYATVTDVEDKTFDEVF 118 Query: 120 AVDVKAPFFLTQAALPRLRDGGRIINISSGTSRIVNPNVVSYAMAKGALEVFSKTAALQL 179 AV+ KAPFF+ Q L RLR+GGR+INISSG +R+ P +V+YAM KGAL ++T AL+L Sbjct: 119 AVNAKAPFFILQHGLDRLREGGRVINISSGAARLATPMLVAYAMTKGALNALTRTLALEL 178 Query: 180 GARGITVNAVAPG--PTATAEFLRMAEGNPAFIEHAKAQSALRRLGTPEDIANIVAFLAS 237 G R ITVN+V PG T A FL +P E A + SA RLG P DIA++VAFLAS Sbjct: 179 GPRNITVNSVEPGIVETDIAFFL----SDPRMNELAASWSAFNRLGQPADIADVVAFLAS 234 Query: 238 DEGGWITGQVIDATGGSLLG 257 + WITGQ IDATGG LLG Sbjct: 235 PDARWITGQFIDATGGFLLG 254