BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1975.p         (74 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002979578.1| Integrase catalytic region [Ralstonia picket...   124   6e-27
ref|ZP_07673644.1| transposase for insertion sequence element [R...   116   9e-25
ref|ZP_07677919.1| transposase for insertion sequence element [R...   115   2e-24
ref|ZP_01015718.1| putative transposase [Maritimibacter alkaliph...   115   3e-24
ref|YP_001168026.1| hypothetical protein Rsph17025_1829 [Rhodoba...   111   4e-23

>ref|YP_002979578.1| Integrase catalytic region [Ralstonia pickettii 12D]
 ref|ZP_07678196.1| transposase OrfB, IS3 family [Ralstonia sp. 5_7_47FAA]
 gb|ACS65924.1| Integrase catalytic region [Ralstonia pickettii 12D]
 gb|EFP63429.1| transposase OrfB, IS3 family [Ralstonia sp. 5_7_47FAA]
          Length = 266

 Score =  124 bits (310), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 62/74 (83%), Positives = 65/74 (87%)

Query: 1   MSAPANPYHNAQAESFMKTLKVEEVYLAGYEKFDDVAARLPYFIEEIYNERRMHSALGYQ 60
           MSAP NPYHNAQAESFMKTLKVEEVYLAGY  FDDVAARLP FIE+ YN +RMHSALGY 
Sbjct: 193 MSAPGNPYHNAQAESFMKTLKVEEVYLAGYRTFDDVAARLPRFIEDTYNAKRMHSALGYV 252

Query: 61  SPNQFEAQLARQAA 74
           SPNQFE+QL  QAA
Sbjct: 253 SPNQFESQLTLQAA 266


>ref|ZP_07673644.1| transposase for insertion sequence element [Ralstonia sp.
           5_7_47FAA]
 gb|EFP68023.1| transposase for insertion sequence element [Ralstonia sp.
           5_7_47FAA]
          Length = 131

 Score =  116 bits (291), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 62/74 (83%), Positives = 65/74 (87%)

Query: 1   MSAPANPYHNAQAESFMKTLKVEEVYLAGYEKFDDVAARLPYFIEEIYNERRMHSALGYQ 60
           MSAP NPYHNAQAESFMKTLKVEEVYLAGY  FDDVAARLP FIE+ YN +RMHSALGY 
Sbjct: 58  MSAPGNPYHNAQAESFMKTLKVEEVYLAGYRTFDDVAARLPRFIEDTYNAKRMHSALGYV 117

Query: 61  SPNQFEAQLARQAA 74
           SPNQFE+QL  QAA
Sbjct: 118 SPNQFESQLTLQAA 131


>ref|ZP_07677919.1| transposase for insertion sequence element [Ralstonia sp.
           5_7_47FAA]
 gb|EFP63703.1| transposase for insertion sequence element [Ralstonia sp.
           5_7_47FAA]
          Length = 117

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 62/74 (83%), Positives = 65/74 (87%)

Query: 1   MSAPANPYHNAQAESFMKTLKVEEVYLAGYEKFDDVAARLPYFIEEIYNERRMHSALGYQ 60
           MSAP NPYHNAQAESFMKTLKVEEVYLAGY  FDDVAARLP FIE+ YN +RMHSALGY 
Sbjct: 44  MSAPGNPYHNAQAESFMKTLKVEEVYLAGYRTFDDVAARLPRFIEDTYNAKRMHSALGYV 103

Query: 61  SPNQFEAQLARQAA 74
           SPNQFE+QL  QAA
Sbjct: 104 SPNQFESQLTLQAA 117


>ref|ZP_01015718.1| putative transposase [Maritimibacter alkaliphilus HTCC2654]
 gb|EAQ10655.1| putative transposase [Rhodobacterales bacterium HTCC2654]
          Length = 264

 Score =  115 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 56/74 (75%), Positives = 64/74 (86%)

Query: 1   MSAPANPYHNAQAESFMKTLKVEEVYLAGYEKFDDVAARLPYFIEEIYNERRMHSALGYQ 60
           MS   NPYHNAQAESFMKTLKVEEVY AGYE F DVAARLP +IE++YN +R+HSALGY+
Sbjct: 191 MSGVGNPYHNAQAESFMKTLKVEEVYRAGYETFTDVAARLPRYIEQVYNAKRLHSALGYR 250

Query: 61  SPNQFEAQLARQAA 74
           SP +FE QLAR+AA
Sbjct: 251 SPEEFETQLAREAA 264


>ref|YP_001168026.1| hypothetical protein Rsph17025_1829 [Rhodobacter sphaeroides ATCC
           17025]
 gb|ABP70721.1| hypothetical protein Rsph17025_1829 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 274

 Score =  111 bits (277), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 53/74 (71%), Positives = 62/74 (83%)

Query: 1   MSAPANPYHNAQAESFMKTLKVEEVYLAGYEKFDDVAARLPYFIEEIYNERRMHSALGYQ 60
           MS+  NPYHNAQAESFMKTLKVEEVY AGYE F DVAARLP FIE++YN +R+HSAL Y+
Sbjct: 194 MSSVGNPYHNAQAESFMKTLKVEEVYRAGYETFADVAARLPVFIEQVYNSKRLHSALRYR 253

Query: 61  SPNQFEAQLARQAA 74
           +P +FE   AR+AA
Sbjct: 254 TPEEFETLFARKAA 267