BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1966.p (392 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773990.1| major facilitator superfamily permease [Herb... 513 e-143 ref|ZP_06690911.1| conserved hypothetical protein [Acinetobacter... 450 e-124 ref|ZP_06056287.1| major facilitator superfamily transporter per... 445 e-123 ref|YP_001845876.1| major facilitator superfamily permease [Acin... 445 e-123 gb|ADY81101.1| putative transporter [Acinetobacter calcoaceticus... 444 e-123 >ref|YP_003773990.1| major facilitator superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ62082.1| permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 392 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 320/390 (82%), Positives = 350/390 (89%) Query: 1 MVPSSPALSRRLLLLFALASGLSVANVYYAQPLLDALSQDFRINQSAIGGVVTATQLGCA 60 M SSP LS+ LLLLFA+ASGLSVANVYYAQPLLDALS DF+I+Q+A+GGVVTATQLGCA Sbjct: 1 MATSSPPLSQGLLLLFAIASGLSVANVYYAQPLLDALSDDFKISQAAVGGVVTATQLGCA 60 Query: 61 LALLFLVPLGDKVARKKLTGLQLSGLICALVTVGLARTSCTLLAGMLAVGLLGTAMTQGL 120 LALL LVPLGDKV RK L G+QL L+CALVTVGLAR+S LLAGMLAVGLLGTAMTQGL Sbjct: 61 LALLLLVPLGDKVPRKMLMGIQLLALVCALVTVGLARSSYVLLAGMLAVGLLGTAMTQGL 120 Query: 121 IAYAASVASESERGRVVGAAQTGVFIGLLLSRVFSGAISDVTGWRGVYFCAALMMLLLAW 180 IAYAAS A E ERGRVVGAAQ+GVFIGLLLSRVFSGA+SDVTGWRGVY CAA+MML LAW Sbjct: 121 IAYAASAAGEDERGRVVGAAQSGVFIGLLLSRVFSGAVSDVTGWRGVYLCAAIMMLCLAW 180 Query: 181 PLWRGLPAVPVSSNGLSYARLLASMWSLLRHDKVLQVRGTLAMLMFASFNIFWSALVLPL 240 PLW+ LPA+PV ++GL Y L+ SMW LLR DKVLQVRG LAMLMFA+FN+FWSALVLPL Sbjct: 181 PLWKRLPAIPVQADGLRYLTLIKSMWCLLRDDKVLQVRGVLAMLMFAAFNVFWSALVLPL 240 Query: 241 SASPYHFSHTAIGAFGLVGVIGALAASRAGRWADKGHAQRTSAAALSLLLLAWWPLSLMD 300 SASPYHFSHT IGAFGLVGVIGALAAS+AGRW+D+GHAQRTSA +L++LLLAWWPLSLM+ Sbjct: 241 SASPYHFSHTVIGAFGLVGVIGALAASKAGRWSDQGHAQRTSAVSLAVLLLAWWPLSLME 300 Query: 301 GSLWALVAGIILLDLGGQALHVTNQSLILRSSPGAHGRLIGVYMLFYTVGSGLGALSTTV 360 SLWALVAGIILLDLGGQALHVTNQSLI RSSP AH RL+GVYMLFY VGSGLGA+STT Sbjct: 301 SSLWALVAGIILLDLGGQALHVTNQSLIFRSSPQAHSRLVGVYMLFYAVGSGLGAISTTA 360 Query: 361 VYAAHGWRGVCLLGAAVSFIALLFWLTTCR 390 +YAA GW+GVC LGAAVSFIALLFWL R Sbjct: 361 IYAARGWQGVCFLGAAVSFIALLFWLMARR 390 >ref|ZP_06690911.1| conserved hypothetical protein [Acinetobacter sp. SH024] gb|EFF87543.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 401 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 271/381 (71%), Positives = 319/381 (83%) Query: 8 LSRRLLLLFALASGLSVANVYYAQPLLDALSQDFRINQSAIGGVVTATQLGCALALLFLV 67 + R ++LLFA+ASG SVANVYYAQPLLD L++DF ++ +AIGGVVTATQ+GCALAL+FLV Sbjct: 1 MPRGVILLFAIASGASVANVYYAQPLLDILARDFNVSHAAIGGVVTATQIGCALALIFLV 60 Query: 68 PLGDKVARKKLTGLQLSGLICALVTVGLARTSCTLLAGMLAVGLLGTAMTQGLIAYAASV 127 PLGD V R++L LQL LI AL+ VG ++ LLAGMLAVGLLGTAMTQGLIAYAAS Sbjct: 61 PLGDLVNRRRLMALQLIALISALLVVGFTHSTIILLAGMLAVGLLGTAMTQGLIAYAASA 120 Query: 128 ASESERGRVVGAAQTGVFIGLLLSRVFSGAISDVTGWRGVYFCAALMMLLLAWPLWRGLP 187 A+ E+G VVG AQ+GVFIGLLL+RVFSG ISDV GWRGVYFCAA++ML++A PLW+ LP Sbjct: 121 AAPHEQGHVVGTAQSGVFIGLLLARVFSGGISDVAGWRGVYFCAAIIMLMIALPLWKRLP 180 Query: 188 AVPVSSNGLSYARLLASMWSLLRHDKVLQVRGTLAMLMFASFNIFWSALVLPLSASPYHF 247 + + + + Y +LLASM LLR +KVLQVRG LA+LMFA+FNIFWSALVLPLSA PY F Sbjct: 181 HLNIQPSAMRYPQLLASMLKLLRQEKVLQVRGVLALLMFAAFNIFWSALVLPLSAPPYSF 240 Query: 248 SHTAIGAFGLVGVIGALAASRAGRWADKGHAQRTSAAALSLLLLAWWPLSLMDGSLWALV 307 SHT IG+FGLVGVIGALAA+RAG WAD+G+AQRTS AAL +LLLAW PLSLM SLWA+V Sbjct: 241 SHTVIGSFGLVGVIGALAAARAGYWADRGYAQRTSLAALLILLLAWGPLSLMAYSLWAVV 300 Query: 308 AGIILLDLGGQALHVTNQSLILRSSPGAHGRLIGVYMLFYTVGSGLGALSTTVVYAAHGW 367 GI+LLDLGGQALHVTNQS+I R+ P AH RL+G+YMLFY +GSGLGA+STT YA GW Sbjct: 301 IGIVLLDLGGQALHVTNQSMIFRTRPEAHSRLVGLYMLFYAIGSGLGAISTTTTYAYAGW 360 Query: 368 RGVCLLGAAVSFIALLFWLTT 388 GVC LGA+VSF+ALLFW T Sbjct: 361 LGVCALGASVSFLALLFWWMT 381 >ref|ZP_06056287.1| major facilitator superfamily transporter permease [Acinetobacter calcoaceticus RUH2202] gb|EEY77586.1| major facilitator superfamily transporter permease [Acinetobacter calcoaceticus RUH2202] Length = 416 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 270/383 (70%), Positives = 316/383 (82%) Query: 6 PALSRRLLLLFALASGLSVANVYYAQPLLDALSQDFRINQSAIGGVVTATQLGCALALLF 65 P +SR L+LLFA+ASG SVANVYYAQPLLD L++DF I+ +AIGGVVTATQ+GCALAL+F Sbjct: 19 PEMSRSLILLFAIASGASVANVYYAQPLLDILARDFSISHAAIGGVVTATQIGCALALVF 78 Query: 66 LVPLGDKVARKKLTGLQLSGLICALVTVGLARTSCTLLAGMLAVGLLGTAMTQGLIAYAA 125 LVPLGD V R++L +QL L+ AL+ V A + LLAGMLAVGLLGTAMTQGLIAYAA Sbjct: 79 LVPLGDLVNRRRLMAIQLLALVSALLVVAFAHSVVVLLAGMLAVGLLGTAMTQGLIAYAA 138 Query: 126 SVASESERGRVVGAAQTGVFIGLLLSRVFSGAISDVTGWRGVYFCAALMMLLLAWPLWRG 185 S A+ E+G VVG AQ+GVFIGLLL+RVFSG ISDV GWRGVYFCAA++ML++A PLWR Sbjct: 139 SAAAPHEQGHVVGTAQSGVFIGLLLARVFSGGISDVAGWRGVYFCAAIIMLMIALPLWRR 198 Query: 186 LPAVPVSSNGLSYARLLASMWSLLRHDKVLQVRGTLAMLMFASFNIFWSALVLPLSASPY 245 LP + V + Y +LLASM LL +K+LQVRG LA+LMFA+FNIFWSALVLPLS PY Sbjct: 199 LPHLKVQPVSMRYPQLLASMLKLLYQEKILQVRGVLALLMFAAFNIFWSALVLPLSEPPY 258 Query: 246 HFSHTAIGAFGLVGVIGALAASRAGRWADKGHAQRTSAAALSLLLLAWWPLSLMDGSLWA 305 FSHT IG+FGLVGV+GALAA+RAG+WAD+G+AQRTS AL +LL+AW PLSLM SLWA Sbjct: 259 RFSHTIIGSFGLVGVVGALAAARAGQWADRGYAQRTSLVALLILLIAWGPLSLMTYSLWA 318 Query: 306 LVAGIILLDLGGQALHVTNQSLILRSSPGAHGRLIGVYMLFYTVGSGLGALSTTVVYAAH 365 LV GI+LLDLGGQALHVTNQS+I R+ P AH RL+G+YMLFY +GSGLGA+STTV YA Sbjct: 319 LVIGIVLLDLGGQALHVTNQSMIFRTRPEAHSRLVGLYMLFYAIGSGLGAISTTVTYAHA 378 Query: 366 GWRGVCLLGAAVSFIALLFWLTT 388 GW GVC LGA VS +ALLFW T Sbjct: 379 GWLGVCALGAGVSLLALLFWWMT 401 >ref|YP_001845876.1| major facilitator superfamily permease [Acinetobacter baumannii ACICU] ref|ZP_08442511.1| transporter, major facilitator family protein [Acinetobacter baumannii 6014059] gb|ACC56529.1| Permease of the major facilitator superfamily [Acinetobacter baumannii ACICU] gb|ADX03306.1| Putative Permease of the major facilitator superfamily [Acinetobacter baumannii 1656-2] gb|ADX91831.1| major facilitator superfamily permease [Acinetobacter baumannii TCDC-AB0715] gb|EGJ68114.1| transporter, major facilitator family protein [Acinetobacter baumannii 6014059] gb|EGK46995.1| major facilitator superfamily permease [Acinetobacter baumannii AB210] gb|EGT95172.1| major facilitator superfamily permease [Acinetobacter baumannii ABNIH1] gb|EGT95546.1| major facilitator superfamily permease [Acinetobacter baumannii ABNIH3] gb|EGT97498.1| major facilitator superfamily permease [Acinetobacter baumannii ABNIH2] gb|EGU02870.1| major facilitator superfamily permease [Acinetobacter baumannii ABNIH4] Length = 404 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 270/383 (70%), Positives = 316/383 (82%) Query: 8 LSRRLLLLFALASGLSVANVYYAQPLLDALSQDFRINQSAIGGVVTATQLGCALALLFLV 67 L R ++LLFA+ASG+SVANVYYAQPLLD L+ DF I+ +AIGGVVTATQ+GCALAL+FLV Sbjct: 21 LPRSVVLLFAIASGVSVANVYYAQPLLDILASDFNISHAAIGGVVTATQIGCALALVFLV 80 Query: 68 PLGDKVARKKLTGLQLSGLICALVTVGLARTSCTLLAGMLAVGLLGTAMTQGLIAYAASV 127 PLGD + R++L +QL LI AL+ V A ++ LL GMLAVGLLGTAMTQGLIAYAAS Sbjct: 81 PLGDLINRRRLMAIQLMALISALLMVAFAHSTIVLLTGMLAVGLLGTAMTQGLIAYAASA 140 Query: 128 ASESERGRVVGAAQTGVFIGLLLSRVFSGAISDVTGWRGVYFCAALMMLLLAWPLWRGLP 187 A+ E+G VVG AQ+GVFIGLLL+RVFSG ISDV GWRGVYFCAA++ML++A PLWR LP Sbjct: 141 AAPHEQGHVVGTAQSGVFIGLLLARVFSGGISDVAGWRGVYFCAAIIMLMIALPLWRRLP 200 Query: 188 AVPVSSNGLSYARLLASMWSLLRHDKVLQVRGTLAMLMFASFNIFWSALVLPLSASPYHF 247 + V + Y +LLASM LLR +KVLQVRG LA+ MFA+FNIFWSALVLPLSA PY+F Sbjct: 201 HLNVQPVTMRYPQLLASMLKLLRQEKVLQVRGVLALFMFAAFNIFWSALVLPLSAPPYNF 260 Query: 248 SHTAIGAFGLVGVIGALAASRAGRWADKGHAQRTSAAALSLLLLAWWPLSLMDGSLWALV 307 SHT IG+FGL GVIGALAA+RAG+WAD+G+AQ TS AAL +LLLAWWPLSLM SLWALV Sbjct: 261 SHTVIGSFGLFGVIGALAATRAGQWADRGYAQHTSLAALLILLLAWWPLSLMTYSLWALV 320 Query: 308 AGIILLDLGGQALHVTNQSLILRSSPGAHGRLIGVYMLFYTVGSGLGALSTTVVYAAHGW 367 GI+LLDLGGQALHVTNQS+I R+ P AH RL+G+YMLFY VGSG+GA+STT YA GW Sbjct: 321 IGIVLLDLGGQALHVTNQSMIFRTRPEAHSRLVGLYMLFYAVGSGVGAISTTATYAYAGW 380 Query: 368 RGVCLLGAAVSFIALLFWLTTCR 390 GVC LGA VS +ALLFW T + Sbjct: 381 LGVCSLGACVSLLALLFWWRTMK 403 >gb|ADY81101.1| putative transporter [Acinetobacter calcoaceticus PHEA-2] Length = 416 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 271/382 (70%), Positives = 318/382 (83%) Query: 7 ALSRRLLLLFALASGLSVANVYYAQPLLDALSQDFRINQSAIGGVVTATQLGCALALLFL 66 ++ R ++LLFA+ASG SVANVYYAQPLLD L++DF ++ +AIGGVVTATQ+GCALAL+FL Sbjct: 20 SMPRGVILLFAIASGASVANVYYAQPLLDILARDFNVSHAAIGGVVTATQIGCALALIFL 79 Query: 67 VPLGDKVARKKLTGLQLSGLICALVTVGLARTSCTLLAGMLAVGLLGTAMTQGLIAYAAS 126 VPLGD V R++L LQL LI AL+ VG A ++ LLAGMLAVGLLGTAMTQGLIAYAA Sbjct: 80 VPLGDLVNRRRLMALQLLALIFALLAVGFAHSTIILLAGMLAVGLLGTAMTQGLIAYAAG 139 Query: 127 VASESERGRVVGAAQTGVFIGLLLSRVFSGAISDVTGWRGVYFCAALMMLLLAWPLWRGL 186 A E+G VVG AQ+GVFIGLLL+RVFSG ISDV GWRGVYFCAA++ML++A PLW+ L Sbjct: 140 AALPHEQGHVVGTAQSGVFIGLLLARVFSGGISDVAGWRGVYFCAAIIMLMIALPLWKRL 199 Query: 187 PAVPVSSNGLSYARLLASMWSLLRHDKVLQVRGTLAMLMFASFNIFWSALVLPLSASPYH 246 P + + + + Y +LLASM LLR +KVLQVRG LA+LMFA+FNIFWSALVLPLSA PY Sbjct: 200 PHLNIQPSAMRYPQLLASMLKLLRQEKVLQVRGVLALLMFAAFNIFWSALVLPLSAPPYS 259 Query: 247 FSHTAIGAFGLVGVIGALAASRAGRWADKGHAQRTSAAALSLLLLAWWPLSLMDGSLWAL 306 FSHT IG+FGLVGV+GALAA+RAG W D+G+AQRTS AAL +LLLAW PLSLM SLWAL Sbjct: 260 FSHTVIGSFGLVGVVGALAAARAGYWVDRGYAQRTSLAALLILLLAWGPLSLMAYSLWAL 319 Query: 307 VAGIILLDLGGQALHVTNQSLILRSSPGAHGRLIGVYMLFYTVGSGLGALSTTVVYAAHG 366 V GI+LLDLGGQALHVTNQS+I R+ P AH RL+G+YMLFY VGSGLGA+STT YA G Sbjct: 320 VIGIVLLDLGGQALHVTNQSMIFRTRPEAHSRLVGLYMLFYAVGSGLGAISTTATYAYAG 379 Query: 367 WRGVCLLGAAVSFIALLFWLTT 388 W GVC LGA+VSF+ALLFW T Sbjct: 380 WLGVCALGASVSFLALLFWWMT 401