BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1961.p (365 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003594956.1| hemolysin D [Caulobacter segnis ATCC 21756] ... 305 7e-81 ref|YP_001260958.1| secretion protein HlyD family protein [Sphin... 301 8e-80 ref|ZP_08388265.1| hlyD secretion family protein [Sphingomonas s... 299 4e-79 ref|YP_001176677.1| secretion protein HlyD family protein [Enter... 297 2e-78 ref|YP_001672193.1| secretion protein HlyD family protein [Caulo... 296 3e-78 >ref|YP_003594956.1| hemolysin D [Caulobacter segnis ATCC 21756] gb|ADG12338.1| secretion protein HlyD family protein [Caulobacter segnis ATCC 21756] Length = 933 Score = 305 bits (782), Expect = 7e-81, Method: Composition-based stats. Identities = 186/333 (55%), Positives = 242/333 (72%), Gaps = 1/333 (0%) Query: 25 LLLALAVLAAAVLLILHAWHLPPFDGPLQHTDNAYVRGRTAVIAPQVSGYVVEVPVKDYQ 84 + + V A +LLIL W LPPF G +Q TDNAYVRG+ V+APQ+SGYVV V +D+Q Sbjct: 594 IFITATVTLAVILLILFLWKLPPFGGSVQRTDNAYVRGQVTVVAPQLSGYVVGVAAQDFQ 653 Query: 85 QVQRGQVLVRIDSRIYAARVEQAKAAVAAQIAQLENATQAKRARAAAITAQDAALANAQA 144 V++GQ L ID RIYA RV+QA+A +AA+ A L N+ QA+ +R AA+ +++A + +AQA Sbjct: 654 TVRKGQPLFTIDQRIYAQRVDQARATLAAREADLANSAQAQASREAALKSREADIGSAQA 713 Query: 145 QLQRARMDLARVDELVSDGSVALRERDQNLAAHAQAEAQVRQASAALDMARQDLRTVEVG 204 Q++RAR D+ARV +L +DGSV+LRERDQ AA AEA + A A ++ARQD+R+V V Sbjct: 714 QVERARADMARVADLATDGSVSLRERDQARAALRAAEATLASAKAGREIARQDIRSVGVS 773 Query: 205 RDALVANVEAAHAQLRLAQIDLDNTVIRAAEDGQLGEVGVRLGQYVTNGTQLLQLVPAER 264 R+ L A V AA A LRLA+IDL NT++ A DGQLG+VGVR GQ+VT GTQL+ LVP +R Sbjct: 774 REGLEAAVAAAKAALRLAEIDLSNTIVTAPADGQLGQVGVRHGQWVTAGTQLVSLVPPQR 833 Query: 265 WVVAHFKEAQTAAMRPGQYAEVRIDALEGQRLSGRVQLLAPAAGSEFAAIKPDTTTGNFV 324 WV+A+FKE Q+ MRPGQ A V +DAL QR +GRV+ ++PA GSEF+ + P TGNF Sbjct: 834 WVIANFKERQSGRMRPGQPASVTVDALGDQRFTGRVEQVSPATGSEFSILPPQNATGNFT 893 Query: 325 KIPQRIGVKIVFDDA-ASAALLRPGMSVEATVD 356 KI QR+ V+IV D A A LRPGMSV+A VD Sbjct: 894 KIAQRLPVRIVLDAGQADLARLRPGMSVQAEVD 926 >ref|YP_001260958.1| secretion protein HlyD family protein [Sphingomonas wittichii RW1] gb|ABQ66820.1| secretion protein HlyD family protein [Sphingomonas wittichii RW1] Length = 375 Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats. Identities = 203/347 (58%), Positives = 247/347 (71%), Gaps = 2/347 (0%) Query: 11 SVPAG-LPPKVSRLRLLLALAVLAAAVLLILHAWHLPPFDGPLQHTDNAYVRGRTAVIAP 69 S P+G PP SR + +A+ A+L IL+AW LPPF G + TDNAYVRGR +I+P Sbjct: 23 SPPSGWAPPPRSRSVTIAIVAIAVVAILAILYAWQLPPFAGFSERTDNAYVRGRVTIISP 82 Query: 70 QVSGYVVEVPVKDYQQVQRGQVLVRIDSRIYAARVEQAKAAVAAQIAQLENATQAKRARA 129 QVSGYV VPV+D+ +V+ GQVL ID RIY ARV QA+A VAAQ A L N+TQA+R+R Sbjct: 83 QVSGYVTSVPVQDFAEVKAGQVLATIDDRIYRARVAQAEANVAAQEASLANSTQAQRSRE 142 Query: 130 AAITAQDAALANAQAQLQRARMDLARVDELVSDGSVALRERDQNLAAHAQAEAQVRQASA 189 A +QDAA+ NA+AQL RA D+ R D L++DGS++ RERDQ AA A+A VRQA A Sbjct: 143 VATASQDAAIVNARAQLVRAEADMRRADALIADGSISARERDQTRAALLAAQAGVRQAEA 202 Query: 190 ALDMARQDLRTVEVGRDALVANVEAAHAQLRLAQIDLDNTVIRAAEDGQLGEVGVRLGQY 249 A + QD+RTV VGR L A VE A AQLRLA+IDLDNTVIRA GQL E+GVR G + Sbjct: 203 ARAIGTQDVRTVLVGRGGLTAAVEGARAQLRLARIDLDNTVIRAPVAGQLSEIGVRNGAF 262 Query: 250 VTNGTQLLQLVPAERWVVAHFKEAQTAAMRPGQYAEVRIDALEGQRLSGRVQLLAPAAGS 309 VT GTQL+ LVP + WVVA+FKEAQT MR GQ A ++DAL G +L+G V+ +APAAGS Sbjct: 263 VTAGTQLMFLVPHDAWVVANFKEAQTRDMRVGQSASFKVDALGGAKLTGHVENIAPAAGS 322 Query: 310 EFAAIKPDTTTGNFVKIPQRIGVKIVFDDAAS-AALLRPGMSVEATV 355 EFA +K D TGNFVK+ QRI V+I D A LRPGMSVEA + Sbjct: 323 EFAVLKADNATGNFVKVAQRISVRIRIDPGQELARRLRPGMSVEAKI 369 >ref|ZP_08388265.1| hlyD secretion family protein [Sphingomonas sp. S17] gb|EGI55565.1| hlyD secretion family protein [Sphingomonas sp. S17] Length = 393 Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats. Identities = 200/319 (62%), Positives = 242/319 (75%), Gaps = 1/319 (0%) Query: 39 ILHAWHLPPFDGPLQHTDNAYVRGRTAVIAPQVSGYVVEVPVKDYQQVQRGQVLVRIDSR 98 +L AW LPPF +Q TDNAYVRGRT VIAPQVSGYV V V+D++ V+ GQ LVRID R Sbjct: 67 VLAAWRLPPFSSEIQSTDNAYVRGRTTVIAPQVSGYVTAVLVRDFETVRAGQPLVRIDDR 126 Query: 99 IYAARVEQAKAAVAAQIAQLENATQAKRARAAAITAQDAALANAQAQLQRARMDLARVDE 158 IY RVEQA A VAAQ A L N+ QA+ +RAA+++AQDAA+ANA+AQL RA+ D+ARV++ Sbjct: 127 IYRQRVEQATAQVAAQEATLANSRQAQASRAASLSAQDAAVANAEAQLMRAQADMARVND 186 Query: 159 LVSDGSVALRERDQNLAAHAQAEAQVRQASAALDMARQDLRTVEVGRDALVANVEAAHAQ 218 LV+DGSV+LRERDQ LAA QA+A +RQA AA ++A+QD+RTV VGR A V A A Sbjct: 187 LVTDGSVSLRERDQTLAALRQAQAALRQAKAAREIAQQDVRTVVVGRGGQQAGVSGAEAA 246 Query: 219 LRLAQIDLDNTVIRAAEDGQLGEVGVRLGQYVTNGTQLLQLVPAERWVVAHFKEAQTAAM 278 RLAQIDL NTV+RA E+G+L EVGVRLGQYVT G+QL+ LVP E WV+A+FKEAQTA M Sbjct: 247 RRLAQIDLANTVVRAPENGRLSEVGVRLGQYVTAGSQLMFLVPPETWVIANFKEAQTARM 306 Query: 279 RPGQYAEVRIDALEGQRLSGRVQLLAPAAGSEFAAIKPDTTTGNFVKIPQRIGVKIVFDD 338 GQ A +D L RL G V+ ++PAAGSEFA +K D TGNF K+PQRI V+I D Sbjct: 307 AVGQPASFTVDGLANARLKGHVERISPAAGSEFAVLKSDNATGNFTKVPQRIAVRIRVDP 366 Query: 339 AAS-AALLRPGMSVEATVD 356 AA LRPGMSV+A+VD Sbjct: 367 GQPLAARLRPGMSVQASVD 385 >ref|YP_001176677.1| secretion protein HlyD family protein [Enterobacter sp. 638] gb|ABP60626.1| secretion protein HlyD family protein [Enterobacter sp. 638] Length = 360 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 179/350 (51%), Positives = 240/350 (68%), Gaps = 1/350 (0%) Query: 8 NSSSVPAGLPPKVSRLRLLLALAVLAAAVLLILHAWHLPPFDGPLQHTDNAYVRGRTAVI 67 ++++V A + + + A A+ VL+IL+AW LPPF Q TDNAYVRG+T I Sbjct: 5 DAANVQANTRNNLRVVSIFTAAAIGIVGVLVILYAWQLPPFTRHTQFTDNAYVRGQTTFI 64 Query: 68 APQVSGYVVEVPVKDYQQVQRGQVLVRIDSRIYAARVEQAKAAVAAQIAQLENATQAKRA 127 +PQV+GY+ EV V+D+ QV++G +L++ID RIY RV QA+A +A +IA L N Q +++ Sbjct: 65 SPQVNGYITEVNVQDFVQVKKGDLLLQIDDRIYRQRVHQAEAQLAMKIAALNNNLQQRKS 124 Query: 128 RAAAITAQDAALANAQAQLQRARMDLARVDELVSDGSVALRERDQNLAAHAQAEAQVRQA 187 A I DAAL NA+AQ + + DL RV +L +DGS+++RERD LA+ AQ A + QA Sbjct: 125 AEAVIVRNDAALKNARAQNLKTQADLKRVKDLTADGSLSIRERDAALASAAQGSADIDQA 184 Query: 188 SAALDMARQDLRTVEVGRDALVANVEAAHAQLRLAQIDLDNTVIRAAEDGQLGEVGVRLG 247 A L+M+RQDL+TV V R AL A+VE+A A L LAQIDL NT I A DGQLG++ VRLG Sbjct: 185 KATLEMSRQDLQTVIVNRGALEADVESAKAALELAQIDLQNTRITAPRDGQLGQIAVRLG 244 Query: 248 QYVTNGTQLLQLVPAERWVVAHFKEAQTAAMRPGQYAEVRIDALEGQRLSGRVQLLAPAA 307 YVT GT L LVP + WV+A+ KE Q A +R GQ + +DAL G+ GRV+ ++PA Sbjct: 245 AYVTAGTHLTTLVPPQHWVIANIKETQLADLRVGQPVKFTVDALNGKAYQGRVESISPAT 304 Query: 308 GSEFAAIKPDTTTGNFVKIPQRIGVKI-VFDDAASAALLRPGMSVEATVD 356 G EF+AI PD TGNFVKI QRI V+I V ++ALLRPGMSV+ ++D Sbjct: 305 GVEFSAITPDNATGNFVKIAQRIPVRIEVLGKPEASALLRPGMSVQVSID 354 >ref|YP_001672193.1| secretion protein HlyD family protein [Caulobacter sp. K31] gb|ABZ74534.1| secretion protein HlyD family protein [Caulobacter sp. K31] Length = 385 Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats. Identities = 182/332 (54%), Positives = 233/332 (70%), Gaps = 1/332 (0%) Query: 26 LLALAVLAAAVLLILHAWHLPPFDGPLQHTDNAYVRGRTAVIAPQVSGYVVEVPVKDYQQ 85 L+A+ + A+LLIL AW LPPF G + TDNAY+RGR +++PQVSGYV EV VKD+ Sbjct: 49 LVAVCLGLVAILLILFAWKLPPFSGAGERTDNAYIRGRVTIVSPQVSGYVAEVRVKDFDN 108 Query: 86 VQRGQVLVRIDSRIYAARVEQAKAAVAAQIAQLENATQAKRARAAAITAQDAALANAQAQ 145 V+ GQ L R+D RIY R++QAKA +AA+ A L+NATQ +R A + A+ A + +A+AQ Sbjct: 109 VEAGQALFRVDDRIYRQRLDQAKATLAARQADLDNATQTGASRRATLGARVAEVGSAEAQ 168 Query: 146 LQRARMDLARVDELVSDGSVALRERDQNLAAHAQAEAQVRQASAALDMARQDLRTVEVGR 205 L RA+ D+ARV EL DGSV+LRERDQ+LA AEA VRQA+A D+A QD+ V V R Sbjct: 169 LVRAQADMARVSELALDGSVSLRERDQSLAGLRAAEATVRQAAAGRDVAEQDVVAVGVNR 228 Query: 206 DALVANVEAAHAQLRLAQIDLDNTVIRAAEDGQLGEVGVRLGQYVTNGTQLLQLVPAERW 265 +ALVA VE A A +RLA+IDL NTVI E+GQLG+VG RLGQYVT G+QL+ LVP W Sbjct: 229 EALVAAVEGARAAVRLAEIDLSNTVITVTENGQLGQVGARLGQYVTAGSQLVSLVPPSYW 288 Query: 266 VVAHFKEAQTAAMRPGQYAEVRIDALEGQRLSGRVQLLAPAAGSEFAAIKPDTTTGNFVK 325 V+A+FKE QT+ M GQ V +DAL + L+GR++ ++PA GSEFA + TGNF K Sbjct: 289 VIANFKERQTSRMAVGQKVHVSVDALGDRHLAGRIEQISPATGSEFAVLPAQNATGNFTK 348 Query: 326 IPQRIGVKIVFDDAASA-ALLRPGMSVEATVD 356 I QR+ V+I D +RPGMSV A VD Sbjct: 349 IAQRLPVRIALDPGQQGLERIRPGMSVVAYVD 380