BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1950.p (262 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_103755.1| 3-hydroxybutyrate dehydrogenase [Mesorhizobium ... 369 e-100 ref|YP_004155961.1| 3-hydroxybutyrate dehydrogenase [Variovorax ... 367 e-100 ref|ZP_01128186.1| 3-hydroxybutyrate dehydrogenase [Nitrococcus ... 366 2e-99 ref|YP_002944121.1| 3-hydroxybutyrate dehydrogenase [Variovorax ... 363 1e-98 ref|YP_004490316.1| 3-hydroxybutyrate dehydrogenase [Delftia sp.... 363 1e-98 >ref|NP_103755.1| 3-hydroxybutyrate dehydrogenase [Mesorhizobium loti MAFF303099] dbj|BAB49541.1| beta-hydroxybutyrate dehydrogenase [Mesorhizobium loti MAFF303099] Length = 256 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 199/258 (77%), Positives = 220/258 (85%), Gaps = 3/258 (1%) Query: 5 NKVAIVTGAASGIGKEIALTFARAGAKVAIADLNLQAAVATAVEIEAIAGKGSAIGVAMD 64 +KV +VTGAASGIGKEIALTFAR GAKV IADL+L AA TA EI+ A + A+GV MD Sbjct: 2 DKVVVVTGAASGIGKEIALTFARKGAKVVIADLDLDAAEETAREIDPAALR--ALGVGMD 59 Query: 65 VSNEEQVNTGIDNVVSHFGRLDVLVSNAGIQIVAPLDQFDFAKWKQMLAIHLDGAFLTTK 124 VSNE+QV +GI VV FGR+DVLVSNAG+Q VAPL +FDF KW+++L+IHLDGAFLTT+ Sbjct: 60 VSNEDQVESGISRVVETFGRIDVLVSNAGVQTVAPLVEFDFDKWRKLLSIHLDGAFLTTR 119 Query: 125 AALRHMYELGNGGSIIYMGSVHSKEASLLKAPYVTAKHGLIGLAKAVAKEGAKHGVRANV 184 AALR MY N GSIIYMGSVHSKEAS KAPYVTAKHGLIGLAK VAKEGA HGVRANV Sbjct: 120 AALRQMYR-QNSGSIIYMGSVHSKEASPFKAPYVTAKHGLIGLAKVVAKEGAAHGVRANV 178 Query: 185 VCPGFVRTPLVEKQIPEQARTLGISEQDVVKNVMLKETVDGEFTTVQDVAEATLFFAGFG 244 +CPGFVRTPLVEKQIPEQAR LGIS +DVVK +ML+ETVDGEFTTVQDVAE LF A F Sbjct: 179 ICPGFVRTPLVEKQIPEQARELGISPEDVVKTMMLRETVDGEFTTVQDVAETALFLAAFP 238 Query: 245 SNALTGQSLVVSHGWFMQ 262 SNALTGQS+VVSHGWFMQ Sbjct: 239 SNALTGQSIVVSHGWFMQ 256 >ref|YP_004155961.1| 3-hydroxybutyrate dehydrogenase [Variovorax paradoxus EPS] gb|ADU37850.1| 3-hydroxybutyrate dehydrogenase [Variovorax paradoxus EPS] Length = 260 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 195/262 (74%), Positives = 227/262 (86%), Gaps = 2/262 (0%) Query: 1 MRLDNKVAIVTGAASGIGKEIALTFARAGAKVAIADLNLQAAVATAVEIEAIAGKGSAIG 60 M+L +KVA +TG+ASGIGKEIA+ FA+ GAK+ IADLN +AA ATA E++A + AIG Sbjct: 1 MQLKDKVAYITGSASGIGKEIAILFAQEGAKIIIADLNKEAADATAAELKATGAE--AIG 58 Query: 61 VAMDVSNEEQVNTGIDNVVSHFGRLDVLVSNAGIQIVAPLDQFDFAKWKQMLAIHLDGAF 120 VA+DV+NE+QVN ++ FG +D+L+SNAGIQIV P+++F FA WK+MLAIHLDGAF Sbjct: 59 VAVDVTNEDQVNASVEEGAKAFGGIDILISNAGIQIVHPVEEFSFADWKKMLAIHLDGAF 118 Query: 121 LTTKAALRHMYELGNGGSIIYMGSVHSKEASLLKAPYVTAKHGLIGLAKAVAKEGAKHGV 180 LTTKA L+HMY G GGS+IYMGSVHSKEASLLKAPYVTAKHGLIGLAK VAKEGAKHGV Sbjct: 119 LTTKACLKHMYAQGRGGSVIYMGSVHSKEASLLKAPYVTAKHGLIGLAKTVAKEGAKHGV 178 Query: 181 RANVVCPGFVRTPLVEKQIPEQARTLGISEQDVVKNVMLKETVDGEFTTVQDVAEATLFF 240 RANV+CPGFVRTPLVEKQIPEQA+TLGISE++V+KNVMLKETVDGEFTT +DVA L F Sbjct: 179 RANVICPGFVRTPLVEKQIPEQAKTLGISEEEVIKNVMLKETVDGEFTTTEDVARVALLF 238 Query: 241 AGFGSNALTGQSLVVSHGWFMQ 262 AGF +NALTGQSLVVSHGWFMQ Sbjct: 239 AGFPTNALTGQSLVVSHGWFMQ 260 >ref|ZP_01128186.1| 3-hydroxybutyrate dehydrogenase [Nitrococcus mobilis Nb-231] gb|EAR20987.1| 3-hydroxybutyrate dehydrogenase [Nitrococcus mobilis Nb-231] Length = 266 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 203/262 (77%), Positives = 227/262 (86%), Gaps = 2/262 (0%) Query: 1 MRLDNKVAIVTGAASGIGKEIALTFARAGAKVAIADLNLQAAVATAVEIEAIAGKGSAIG 60 MRL +KVAIVTGAASGIGKEIA FARAGAKVAIADL+ AA A E+EA + AIG Sbjct: 7 MRLQDKVAIVTGAASGIGKEIAGCFARAGAKVAIADLDRSAAEQAAEELEAAGHQ--AIG 64 Query: 61 VAMDVSNEEQVNTGIDNVVSHFGRLDVLVSNAGIQIVAPLDQFDFAKWKQMLAIHLDGAF 120 VAMDV++E QV+ G D V G +D+LVSNAGIQIV P++ FDF KWK++LAIHLDGAF Sbjct: 65 VAMDVTDEAQVDAGTDKVAEALGGIDILVSNAGIQIVDPIEDFDFGKWKRLLAIHLDGAF 124 Query: 121 LTTKAALRHMYELGNGGSIIYMGSVHSKEASLLKAPYVTAKHGLIGLAKAVAKEGAKHGV 180 LTT+AALR MY G GGS+IYMGSVHSKEAS+LKAPYVTAKHGLIGLAK VAKEGA+HGV Sbjct: 125 LTTRAALRRMYRQGRGGSVIYMGSVHSKEASVLKAPYVTAKHGLIGLAKVVAKEGAQHGV 184 Query: 181 RANVVCPGFVRTPLVEKQIPEQARTLGISEQDVVKNVMLKETVDGEFTTVQDVAEATLFF 240 RANV+CPGFVRTPLV+KQIPEQA+ LGISE++VVKNVMLKETVDGEFTT++DVAEA LFF Sbjct: 185 RANVICPGFVRTPLVDKQIPEQAQDLGISEEEVVKNVMLKETVDGEFTTIEDVAEAALFF 244 Query: 241 AGFGSNALTGQSLVVSHGWFMQ 262 A F SNALTGQSLVVSHGWFMQ Sbjct: 245 ASFESNALTGQSLVVSHGWFMQ 266 >ref|YP_002944121.1| 3-hydroxybutyrate dehydrogenase [Variovorax paradoxus S110] gb|ACS18855.1| 3-hydroxybutyrate dehydrogenase [Variovorax paradoxus S110] Length = 260 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 195/262 (74%), Positives = 224/262 (85%), Gaps = 2/262 (0%) Query: 1 MRLDNKVAIVTGAASGIGKEIALTFARAGAKVAIADLNLQAAVATAVEIEAIAGKGSAIG 60 M+L +KVA +TG+ASGIGKEIA+ FAR GAKV IADLN QAA ATA E++A + A+G Sbjct: 1 MQLKDKVAYITGSASGIGKEIAILFAREGAKVVIADLNKQAAEATAAELQATGAQ--ALG 58 Query: 61 VAMDVSNEEQVNTGIDNVVSHFGRLDVLVSNAGIQIVAPLDQFDFAKWKQMLAIHLDGAF 120 VA+DV++EEQV+ ++ FG +D+LVSNAG+QIV P+++F FA WK+MLAIHLDGAF Sbjct: 59 VAVDVTSEEQVDASVEEAAKAFGGIDILVSNAGVQIVHPVEEFSFADWKKMLAIHLDGAF 118 Query: 121 LTTKAALRHMYELGNGGSIIYMGSVHSKEASLLKAPYVTAKHGLIGLAKAVAKEGAKHGV 180 LTTKA L+HMY G GGS+IYMGSVHSKEASLLKAPYVTAKHGLIGLAK VAKEGAKHGV Sbjct: 119 LTTKACLKHMYAQGRGGSVIYMGSVHSKEASLLKAPYVTAKHGLIGLAKTVAKEGAKHGV 178 Query: 181 RANVVCPGFVRTPLVEKQIPEQARTLGISEQDVVKNVMLKETVDGEFTTVQDVAEATLFF 240 RANV+CPGFVRTPLVEKQIPEQA+TLGI+E+ VVKNVMLKETVDGEFTT DVA L F Sbjct: 179 RANVICPGFVRTPLVEKQIPEQAKTLGITEEQVVKNVMLKETVDGEFTTTDDVARVALLF 238 Query: 241 AGFGSNALTGQSLVVSHGWFMQ 262 A F +NALTGQSLVVSHGWFMQ Sbjct: 239 AAFPTNALTGQSLVVSHGWFMQ 260 >ref|YP_004490316.1| 3-hydroxybutyrate dehydrogenase [Delftia sp. Cs1-4] gb|AEF91961.1| 3-hydroxybutyrate dehydrogenase [Delftia sp. Cs1-4] Length = 260 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 193/262 (73%), Positives = 222/262 (84%), Gaps = 2/262 (0%) Query: 1 MRLDNKVAIVTGAASGIGKEIALTFARAGAKVAIADLNLQAAVATAVEIEAIAGKGSAIG 60 M+L +KVA +TG+ASGIGKEIA FA GA++ IADLN +AA ATA E+ A + A+G Sbjct: 1 MQLKDKVAFITGSASGIGKEIARLFASEGARIVIADLNKEAADATAAELRATGAQ--AMG 58 Query: 61 VAMDVSNEEQVNTGIDNVVSHFGRLDVLVSNAGIQIVAPLDQFDFAKWKQMLAIHLDGAF 120 VA+DV++E QVN ++ FG +D+LVSNAGIQIV P+++F FA WK+MLAIHLDGAF Sbjct: 59 VAVDVTDEAQVNASVEEAARAFGGIDILVSNAGIQIVHPVEEFSFADWKKMLAIHLDGAF 118 Query: 121 LTTKAALRHMYELGNGGSIIYMGSVHSKEASLLKAPYVTAKHGLIGLAKAVAKEGAKHGV 180 LTT+A L+HMY G GGS+IYMGSVHSKEASLLKAPYVTAKHGLIGLAK VAKEGAKHGV Sbjct: 119 LTTRACLKHMYAQGRGGSVIYMGSVHSKEASLLKAPYVTAKHGLIGLAKTVAKEGAKHGV 178 Query: 181 RANVVCPGFVRTPLVEKQIPEQARTLGISEQDVVKNVMLKETVDGEFTTVQDVAEATLFF 240 RANV+CPGFVRTPLV+KQIPEQARTLGISE +V+KNVMLKETVDGEFTT +DVA L F Sbjct: 179 RANVICPGFVRTPLVDKQIPEQARTLGISEDEVIKNVMLKETVDGEFTTTEDVARVALLF 238 Query: 241 AGFGSNALTGQSLVVSHGWFMQ 262 AGF SNALTGQSLVVSHGWFMQ Sbjct: 239 AGFPSNALTGQSLVVSHGWFMQ 260