BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1941.p (123 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777811.1| cobalt-zinc-cadmium resistance cation efflux... 100 1e-19 ref|YP_145592.1| cobalt-zinc-cadmium resistance protein [Ralston... 67 1e-09 ref|YP_002355736.1| hypothetical protein Tmz1t_2099 [Thauera sp.... 63 1e-08 ref|YP_285821.1| hypothetical protein Daro_2621 [Dechloromonas a... 58 5e-07 ref|YP_001099884.1| cobalt-zinc-cadmium resistance protein CzcI ... 58 5e-07 >ref|YP_003777811.1| cobalt-zinc-cadmium resistance cation efflux system precursor protein [Herbaspirillum seropedicae SmR1] gb|ADJ65903.1| cobalt-zinc-cadmium resistance cation efflux system precursor protein [Herbaspirillum seropedicae SmR1] Length = 117 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 60/111 (54%), Positives = 71/111 (63%), Gaps = 6/111 (5%) Query: 13 PMQLSWAAVASYCQAEKESTSAHLGHHDHPAAETHAQAKSLDSKESKESKAGDLDLDCSL 72 PMQLSWAAVA+YCQ E E + HLGHH+HP+A A + S D DCSL Sbjct: 13 PMQLSWAAVAAYCQEEGERITTHLGHHEHPSATADAPTGTEKPAPSVS------DADCSL 66 Query: 73 CHFCAMKSVQAGSRLLIAPLAMRVSAHFRHVSHPASHIADGPDKPNWLLAA 123 CHF +KSV+ + PLA + AH +V HPASHIA+GPDKPNWLLAA Sbjct: 67 CHFSCIKSVEICRLSVAVPLAPQQKAHPAYVHHPASHIAEGPDKPNWLLAA 117 >ref|YP_145592.1| cobalt-zinc-cadmium resistance protein [Ralstonia metallidurans CH34] ref|YP_581792.2| cation efflux system protein CzcI [Cupriavidus metallidurans CH34] sp|Q44009|CZCI_RALME RecName: Full=Cobalt-zinc-cadmium resistance protein CzcI; AltName: Full=Cation efflux system protein CzcI; Flags: Precursor emb|CAA50524.1| cobalt-zinc-cadmium resistance protein [Cupriavidus metallidurans CH34] emb|CAA67081.1| czcI [Cupriavidus metallidurans CH34] gb|ABF12842.2| Cobalt-zinc-cadmium resistance protein czcI precursor (Cation efflux system protein CzcI) [Cupriavidus metallidurans CH34] Length = 115 Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 20/125 (16%) Query: 1 MRALILLLAFL-LPMQLSWAAVASYCQAEKESTSAHLGHHDH----PAAETHAQAKSLDS 55 MR +L+ L LP Q SWAA A YCQ EK + + HLGHH+H P +T A+ K Sbjct: 1 MRRFVLIFVLLILPFQFSWAAAARYCQHEKATATWHLGHHEHRHQQPEGKTDAEKKPF-- 58 Query: 56 KESKESKAGDLDLDCSLCHFCAMKSVQAGSRLLIAPLAMRVS-AHFRHVSHPASHIADGP 114 +D DC +CH ++ V ++ ++ +A RV +H S +S A P Sbjct: 59 ----------VDTDCGVCHLVSLPFVYGQTQDVL--IANRVEVTDTQHSSEFSSLNARAP 106 Query: 115 DKPNW 119 D+P W Sbjct: 107 DRPQW 111 >ref|YP_002355736.1| hypothetical protein Tmz1t_2099 [Thauera sp. MZ1T] ref|YP_002364214.1| hypothetical protein Tmz1t_2386 [Thauera sp. MZ1T] gb|ACK54840.1| conserved hypothetical protein [Thauera sp. MZ1T] gb|ACK55120.1| conserved hypothetical protein [Thauera sp. MZ1T] Length = 115 Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 9/118 (7%) Query: 2 RALILLLAFLLPMQLSWAAVASYCQAEKESTSAHLGHHDHPAAETHAQAKSLDSKESKES 61 R +L LP+QLSWAAV++YC+ E + + HLGHH+H + + Sbjct: 3 RWFAILFLLFLPIQLSWAAVSAYCEHEAGAAADHLGHHEHKHQS--------EVDDESWP 54 Query: 62 KAGDLDLDCSLCHFCAMKSVQAGSRLLIAPLAMRVSAHFRHVSHPASHIADGPDKPNW 119 K G +D+DCS CH + ++ +G+ L LA+ V A H ++ P++P W Sbjct: 55 KGGGVDVDCSFCHAASCTALPSGTGLPTLDLAIATIRGGAQVWLLAGHFSE-PERPKW 111 >ref|YP_285821.1| hypothetical protein Daro_2621 [Dechloromonas aromatica RCB] gb|AAZ47351.1| hypothetical protein Daro_2621 [Dechloromonas aromatica RCB] Length = 118 Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 38/73 (52%), Gaps = 4/73 (5%) Query: 2 RALILLLAFLLPMQLSWAAVASYCQAEKESTSAHLGHHDHPAAETHAQAKSLDSKESKES 61 R L +LL LP Q SWAAVA YCQ E + + H GHHDH H A D ++ Sbjct: 3 RWLSILLLVFLPFQFSWAAVAGYCQHETGAAAQHFGHHDH----QHQAAADQDGTPDAKT 58 Query: 62 KAGDLDLDCSLCH 74 G +D DC CH Sbjct: 59 LGGGIDGDCVACH 71 >ref|YP_001099884.1| cobalt-zinc-cadmium resistance protein CzcI [Herminiimonas arsenicoxydans] emb|CAL61757.1| conserved hypothetical protein; putative periplasmic cation efflux system protein czcI [Herminiimonas arsenicoxydans] Length = 119 Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 18/128 (14%) Query: 2 RALILLLAFLLPMQLSWAAVASYCQAEKESTSAHLGHHDHPAAETHAQAKSLDSKESKES 61 R LI+L+ ++P+QLSWAA A YC+ E S H GHH+H + A+ K+ SK Sbjct: 3 RLLIILMFVIVPLQLSWAAAAVYCEHETNPKSVHFGHHEHKHIASAAEGKTDVSKS---- 58 Query: 62 KAGDLDLDCSLCHFCAMKSVQAGSRLLIAPLAMR----VSAHFRHVSHP--ASHIADGPD 115 A +D DC+ CH G +L P+ VSA +P AS P+ Sbjct: 59 -AAAVDGDCTSCHL-------GGIAILTIPVPAMALDLVSAPSITAGNPLLASSRPSRPE 110 Query: 116 KPNWLLAA 123 +P W +AA Sbjct: 111 RPKWAVAA 118