BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1938.p (195 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_03269922.1| Carboxymuconolactone decarboxylase [Burkholde... 246 1e-63 ref|YP_003607567.1| hypothetical protein BC1002_4050 [Burkholder... 245 3e-63 ref|YP_554163.1| hypothetical protein Bxe_B1143 [Burkholderia xe... 244 7e-63 ref|YP_004230237.1| carboxymuconolactone decarboxylase [Burkhold... 243 1e-62 ref|YP_003910823.1| carboxymuconolactone decarboxylase [Burkhold... 242 2e-62 >ref|ZP_03269922.1| Carboxymuconolactone decarboxylase [Burkholderia sp. H160] gb|EDZ98501.1| Carboxymuconolactone decarboxylase [Burkholderia sp. H160] Length = 184 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 121/181 (66%), Positives = 146/181 (80%), Gaps = 1/181 (0%) Query: 9 RLPAVDVSTATPAQKEVLEDILKGPRGNLAGPFLSWIHSPELAQHAQKLGAFCRYHTQLP 68 RLP D+STATP QK VL++IL GPRGNL GPFL WIHSPELAQ+AQ+LGAFCRY T LP Sbjct: 4 RLPQFDMSTATPEQKTVLDEILSGPRGNLNGPFLGWIHSPELAQNAQRLGAFCRYQTGLP 63 Query: 69 LSLSELAILCTAARWQAQAEWQIHYPIGIEAGLDAANVEQIRRGERPDFAARDEQMIWEL 128 L LSELAIL TA+RWQAQAEW IHYPI ++AG+ A+ + IR+G RPDFA D+ +I++ Sbjct: 64 LRLSELAILVTASRWQAQAEWYIHYPIALQAGVAEADADTIRQGRRPDFADADDALIYDF 123 Query: 129 VEELYETKRISDPLYREAEQRFGIEVLVNLVGLLGYYSLVAMTLNVFHVRH-GDGALPFA 187 ELYETKR+SD Y +A +RFG +V++NLVGLLGYY+LVAMTLNVF +R G +LPF Sbjct: 124 ASELYETKRVSDATYAQAVERFGHQVVINLVGLLGYYALVAMTLNVFDMRAVGQQSLPFP 183 Query: 188 E 188 E Sbjct: 184 E 184 >ref|YP_003607567.1| hypothetical protein BC1002_4050 [Burkholderia sp. CCGE1002] gb|ADG18056.1| conserved hypothetical protein [Burkholderia sp. CCGE1002] Length = 184 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 121/181 (66%), Positives = 145/181 (80%), Gaps = 1/181 (0%) Query: 9 RLPAVDVSTATPAQKEVLEDILKGPRGNLAGPFLSWIHSPELAQHAQKLGAFCRYHTQLP 68 RLP D+STATP QK VL++IL GPRGNL GPFL WIHSPELAQHAQ+LGAFCRY T LP Sbjct: 4 RLPHFDMSTATPEQKAVLDEILSGPRGNLNGPFLGWIHSPELAQHAQRLGAFCRYQTGLP 63 Query: 69 LSLSELAILCTAARWQAQAEWQIHYPIGIEAGLDAANVEQIRRGERPDFAARDEQMIWEL 128 L LSELAIL TA+RWQAQAEW IHYPI ++AG+ A+ E IR+G RP+FA D+ +I++ Sbjct: 64 LRLSELAILVTASRWQAQAEWYIHYPIALQAGVGVADAEAIRQGGRPEFADADDALIYDF 123 Query: 129 VEELYETKRISDPLYREAEQRFGIEVLVNLVGLLGYYSLVAMTLNVFHVRH-GDGALPFA 187 ELYETKR+SD Y +A RFG +V++NLVGLLGYY+LVA+TLNVF +R G +LPF Sbjct: 124 ASELYETKRVSDATYAQAVGRFGHQVVINLVGLLGYYALVALTLNVFDMRAVGQQSLPFP 183 Query: 188 E 188 E Sbjct: 184 E 184 >ref|YP_554163.1| hypothetical protein Bxe_B1143 [Burkholderia xenovorans LB400] gb|ABE34813.1| putative membrane protein [Burkholderia xenovorans LB400] Length = 185 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 123/181 (67%), Positives = 143/181 (79%), Gaps = 1/181 (0%) Query: 9 RLPAVDVSTATPAQKEVLEDILKGPRGNLAGPFLSWIHSPELAQHAQKLGAFCRYHTQLP 68 RLP D+S ATP QK VL++IL GPRGNL GPFL WIHSPELAQ AQ+LGAFCRY T LP Sbjct: 5 RLPHFDLSDATPEQKAVLDEILSGPRGNLNGPFLGWIHSPELAQQAQRLGAFCRYRTGLP 64 Query: 69 LSLSELAILCTAARWQAQAEWQIHYPIGIEAGLDAANVEQIRRGERPDFAARDEQMIWEL 128 L LSELAIL TAARWQAQAEW IH+PI +EAG+ AA+ E IR G RPDFA D+ +I + Sbjct: 65 LRLSELAILVTAARWQAQAEWYIHHPIALEAGVRAADAEAIRDGRRPDFAQADDALIHDF 124 Query: 129 VEELYETKRISDPLYREAEQRFGIEVLVNLVGLLGYYSLVAMTLNVFHVRH-GDGALPFA 187 ELY+TKR+SD Y +A +RFG V++NLVGLLGYY+LVAMTLNVF +R G +LPFA Sbjct: 125 ASELYDTKRVSDATYAKAVERFGHRVVINLVGLLGYYALVAMTLNVFDMRAVGQESLPFA 184 Query: 188 E 188 E Sbjct: 185 E 185 >ref|YP_004230237.1| carboxymuconolactone decarboxylase [Burkholderia sp. CCGE1001] gb|ADX57177.1| Carboxymuconolactone decarboxylase [Burkholderia sp. CCGE1001] Length = 184 Score = 243 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 122/181 (67%), Positives = 144/181 (79%), Gaps = 1/181 (0%) Query: 9 RLPAVDVSTATPAQKEVLEDILKGPRGNLAGPFLSWIHSPELAQHAQKLGAFCRYHTQLP 68 RLPA +S A+P QK VL++I+ GPRGNL GPFL WIHSPELAQHAQ+LGAFCRY T LP Sbjct: 4 RLPAFQMSDASPEQKAVLDEIVSGPRGNLNGPFLGWIHSPELAQHAQRLGAFCRYGTGLP 63 Query: 69 LSLSELAILCTAARWQAQAEWQIHYPIGIEAGLDAANVEQIRRGERPDFAARDEQMIWEL 128 L LSELAIL TAARWQAQAEW IHYPI +EAG+ AA+ E IR G RP FA D+ +I + Sbjct: 64 LRLSELAILVTAARWQAQAEWYIHYPIALEAGVRAADAEAIRAGRRPAFADADDALIHDF 123 Query: 129 VEELYETKRISDPLYREAEQRFGIEVLVNLVGLLGYYSLVAMTLNVFHVRH-GDGALPFA 187 ELY+TKR+SD Y++A RFG +V++NLVGLLGYY+LVAMTLNVF +R G +LPFA Sbjct: 124 ASELYDTKRVSDATYQKALGRFGHQVVINLVGLLGYYALVAMTLNVFDMRAIGQDSLPFA 183 Query: 188 E 188 E Sbjct: 184 E 184 >ref|YP_003910823.1| carboxymuconolactone decarboxylase [Burkholderia sp. CCGE1003] gb|ADN61532.1| Carboxymuconolactone decarboxylase [Burkholderia sp. CCGE1003] Length = 217 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 119/181 (65%), Positives = 142/181 (78%), Gaps = 1/181 (0%) Query: 9 RLPAVDVSTATPAQKEVLEDILKGPRGNLAGPFLSWIHSPELAQHAQKLGAFCRYHTQLP 68 RLPA ++ ATP QK VL++IL GPRGNL GPFL WIHSPELAQ AQ+LGAFCRY T LP Sbjct: 37 RLPAFQITDATPEQKAVLDEILSGPRGNLNGPFLGWIHSPELAQQAQRLGAFCRYRTGLP 96 Query: 69 LSLSELAILCTAARWQAQAEWQIHYPIGIEAGLDAANVEQIRRGERPDFAARDEQMIWEL 128 L LSELAIL TAARWQAQAEW IHYPI +EAG+ A+ E IR G RP FA D+ ++++ Sbjct: 97 LRLSELAILVTAARWQAQAEWYIHYPIALEAGVREADAEAIRAGRRPVFADPDDALVYDF 156 Query: 129 VEELYETKRISDPLYREAEQRFGIEVLVNLVGLLGYYSLVAMTLNVFHVRH-GDGALPFA 187 ELY+T+R+SD Y +A RFG +V++NLVGLLGYY+LVAMTLNVF +R G +LPFA Sbjct: 157 ASELYDTRRVSDATYEKALGRFGHQVVINLVGLLGYYALVAMTLNVFDMRAIGQKSLPFA 216 Query: 188 E 188 E Sbjct: 217 E 217