BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1932.p (443 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777826.1| permease [Herbaspirillum seropedicae SmR1] >... 753 0.0 ref|ZP_04943085.1| Major facilitator superfamily transporter [Bu... 575 e-162 ref|YP_001862143.1| major facilitator transporter [Burkholderia ... 551 e-154 ref|YP_003908780.1| major facilitator superfamily protein [Burkh... 548 e-153 ref|YP_002235183.1| putative tartrate transporter [Burkholderia ... 546 e-153 >ref|YP_003777826.1| permease [Herbaspirillum seropedicae SmR1] gb|ADJ65918.1| permease transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 431 Score = 753 bits (1943), Expect = 0.0, Method: Composition-based stats. Identities = 402/428 (93%), Positives = 419/428 (97%) Query: 1 METIQDDKRLEQETVRKVTWRLLPFLMLCYLFAFIDRGNIGMAALQMNHDIGLSPKMFGF 60 METIQ++KRLEQETVRKVTWRLLPFLMLCYLFAFIDRGNIGMAALQMNHD+GLSPKMFGF Sbjct: 1 METIQNEKRLEQETVRKVTWRLLPFLMLCYLFAFIDRGNIGMAALQMNHDLGLSPKMFGF 60 Query: 61 ASSLFFIAYFIFEVPSNLALQKFGARKWLARIMVTWGLISACTAFVQGPTSLYFVRFILG 120 ASSLFFIAYFIFEVPSNLALQKFGARKWLARIM+TWGLISACTA VQGP SLYFVRFILG Sbjct: 61 ASSLFFIAYFIFEVPSNLALQKFGARKWLARIMITWGLISACTALVQGPNSLYFVRFILG 120 Query: 121 AAEAGFFPGVVLYLTYWVPSAYRARIVALFMVAIPAASFVASPVSALLLQMDGIGGLRGW 180 AAEAGFFPGVVLYLTYWVPSAYRARIVALFMVAIPAASFVASPVSALLLQMDGIGGLRGW Sbjct: 121 AAEAGFFPGVVLYLTYWVPSAYRARIVALFMVAIPAASFVASPVSALLLQMDGIGGLRGW 180 Query: 181 HWLFLLEGLPTVLLGVVCLFFLTDRPDQARWLNDAQRQWLVATMNKEAASRTAKQHIPLW 240 HWLF+LEGLPTV+LG+VCL FLTDRPDQARWL+D QRQWL TMNKEAASR AKQHIPLW Sbjct: 181 HWLFMLEGLPTVVLGLVCLSFLTDRPDQARWLSDEQRQWLTETMNKEAASRAAKQHIPLW 240 Query: 241 KLFSQPHVWGMALVCACASAAGSVLNVWQPQLLKSFGLTVMQTGLVNSIPYLVASVLMVW 300 KLFSQPHVWGMALVCACASAAGSVLNVWQPQLLKSFGL+VMQTGLVNSIPYL+ASVLMVW Sbjct: 241 KLFSQPHVWGMALVCACASAAGSVLNVWQPQLLKSFGLSVMQTGLVNSIPYLIASVLMVW 300 Query: 301 WGRHSDRTGERRWHTAIPLILIGGGLALASLANTLAPVVLLLTMVLIGAYSFKGPFWAMA 360 WGRHSDRTGERRWHTAIPL+LIGGGLALASLAN+LAPVVLLLTMVLIGAYSFKGPFWAMA Sbjct: 301 WGRHSDRTGERRWHTAIPLMLIGGGLALASLANSLAPVVLLLTMVLIGAYSFKGPFWAMA 360 Query: 361 STWLATGSVAAGLAGINAVSNLIGGGLMVNVYGWVKDATGSFALALLPLVGLSVLSVAIL 420 S+WLATGS AAGLAGINAVSNLIGGGLMVNVYGWVKDATGS+A+ALLP+VGLSV+SV IL Sbjct: 361 SSWLATGSAAAGLAGINAVSNLIGGGLMVNVYGWVKDATGSYAMALLPMVGLSVVSVGIL 420 Query: 421 LFLSRKSR 428 LFLSRKSR Sbjct: 421 LFLSRKSR 428 >ref|ZP_04943085.1| Major facilitator superfamily transporter [Burkholderia cenocepacia PC184] gb|EAY66256.1| Major facilitator superfamily transporter [Burkholderia cenocepacia PC184] Length = 667 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 279/416 (67%), Positives = 347/416 (83%) Query: 10 LEQETVRKVTWRLLPFLMLCYLFAFIDRGNIGMAALQMNHDIGLSPKMFGFASSLFFIAY 69 +E+ T+RKV WRL+PFLM+CYL AFIDRGN+GMA+LQMNHD+G+S ++FGF SSLFFI+Y Sbjct: 238 IERRTIRKVVWRLIPFLMICYLLAFIDRGNVGMASLQMNHDLGMSAQVFGFGSSLFFISY 297 Query: 70 FIFEVPSNLALQKFGARKWLARIMVTWGLISACTAFVQGPTSLYFVRFILGAAEAGFFPG 129 F FEVPSNLALQK+GAR W+ARIM+TWG++SA TA V T+ Y +RF+LGAAEAGFFPG Sbjct: 298 FFFEVPSNLALQKYGARIWIARIMITWGIVSAATALVHNATTFYVLRFLLGAAEAGFFPG 357 Query: 130 VVLYLTYWVPSAYRARIVALFMVAIPAASFVASPVSALLLQMDGIGGLRGWHWLFLLEGL 189 V+LYL+YW+P+ YRARIVA FMVAIPAASF+ SP+SALLLQMDG+ GLRGWHWLF+LEG+ Sbjct: 358 VLLYLSYWIPAQYRARIVATFMVAIPAASFIGSPISALLLQMDGVWGLRGWHWLFILEGI 417 Query: 190 PTVLLGVVCLFFLTDRPDQARWLNDAQRQWLVATMNKEAASRTAKQHIPLWKLFSQPHVW 249 PTVLLG+ CLF LT++P+ ARWL+D +R WL + +R +PL +LF +V Sbjct: 418 PTVLLGIACLFMLTNKPENARWLDDDERAWLSNALAAGHKTRKKVPSLPLAQLFRNRYVL 477 Query: 250 GMALVCACASAAGSVLNVWQPQLLKSFGLTVMQTGLVNSIPYLVASVLMVWWGRHSDRTG 309 +ALV CASAAGS L+VWQPQLLKSFGLTVM+TGL+NS+PY VAS+LMV+WGR SDR G Sbjct: 478 CLALVDTCASAAGSTLSVWQPQLLKSFGLTVMETGLLNSVPYAVASILMVYWGRRSDRVG 537 Query: 310 ERRWHTAIPLILIGGGLALASLANTLAPVVLLLTMVLIGAYSFKGPFWAMASTWLATGSV 369 ERRWHT +P++LIG GL SL+ +L P V +L VL+GAYSFKGPFWA+A+ L+ +V Sbjct: 538 ERRWHTVVPMLLIGVGLFATSLSGSLLPTVCMLCAVLVGAYSFKGPFWALATDMLSNSTV 597 Query: 370 AAGLAGINAVSNLIGGGLMVNVYGWVKDATGSFALALLPLVGLSVLSVAILLFLSR 425 AAGLA +NA++NL+GGGLMVNVYGWVK ATGS+ALAL+PL L+++SVA LL L+R Sbjct: 598 AAGLATVNAIANLLGGGLMVNVYGWVKAATGSYALALMPLAILTLVSVATLLLLTR 653 >ref|YP_001862143.1| major facilitator transporter [Burkholderia phymatum STM815] gb|ACC75097.1| major facilitator superfamily MFS_1 [Burkholderia phymatum STM815] Length = 440 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 283/430 (65%), Positives = 351/430 (81%) Query: 4 IQDDKRLEQETVRKVTWRLLPFLMLCYLFAFIDRGNIGMAALQMNHDIGLSPKMFGFASS 63 I + +E+ T+RKV WRL+PFLM+CYL AFIDRGN+GMA+LQMNHD+G+S K+FGF SS Sbjct: 5 IMEKSAIERRTLRKVVWRLIPFLMVCYLLAFIDRGNVGMASLQMNHDLGMSAKVFGFGSS 64 Query: 64 LFFIAYFIFEVPSNLALQKFGARKWLARIMVTWGLISACTAFVQGPTSLYFVRFILGAAE 123 LFFI+YF EVPSNLALQK+GAR W+ARIM+TWG++SA TA VQ T Y +RF+LGAAE Sbjct: 65 LFFISYFFCEVPSNLALQKYGARIWIARIMITWGIVSAATALVQNATMFYVLRFLLGAAE 124 Query: 124 AGFFPGVVLYLTYWVPSAYRARIVALFMVAIPAASFVASPVSALLLQMDGIGGLRGWHWL 183 AGFFPGV+LYL+YW+P++YRARIVA FMVAIPAASF+ SP+SALLLQMDG GLRGWHWL Sbjct: 125 AGFFPGVLLYLSYWIPASYRARIVATFMVAIPAASFIGSPISALLLQMDGFWGLRGWHWL 184 Query: 184 FLLEGLPTVLLGVVCLFFLTDRPDQARWLNDAQRQWLVATMNKEAASRTAKQHIPLWKLF 243 F+LEG+PTVLLG+ CLF LT++P+ A+WL+D +R WLV + + +PL +LF Sbjct: 185 FILEGIPTVLLGIACLFMLTNKPENAKWLDDEERTWLVDELATAHKAPKKIPSLPLTQLF 244 Query: 244 SQPHVWGMALVCACASAAGSVLNVWQPQLLKSFGLTVMQTGLVNSIPYLVASVLMVWWGR 303 +V +ALV CASAAGS L+VWQPQLLKSFGL+VMQTGL+NS+PY VASVLMV+WGR Sbjct: 245 RNRYVLCLALVDTCASAAGSTLSVWQPQLLKSFGLSVMQTGLLNSVPYAVASVLMVYWGR 304 Query: 304 HSDRTGERRWHTAIPLILIGGGLALASLANTLAPVVLLLTMVLIGAYSFKGPFWAMASTW 363 SDR GERRWHT +P++LIG GL SL+ +L P + +L VL+GAYSFKGPFWA+A+ Sbjct: 305 RSDRLGERRWHTVVPMLLIGVGLFATSLSGSLLPTICMLCAVLVGAYSFKGPFWALATDM 364 Query: 364 LATGSVAAGLAGINAVSNLIGGGLMVNVYGWVKDATGSFALALLPLVGLSVLSVAILLFL 423 L+ +VAAGLA +NA++NL+GGGLMVNVYGWVK+ATGS+ALAL+PL L++ SVA LL L Sbjct: 365 LSNSAVAAGLATVNAIANLLGGGLMVNVYGWVKEATGSYALALMPLAILTLASVATLLML 424 Query: 424 SRKSRTPAAT 433 +RK R T Sbjct: 425 TRKGRASNLT 434 >ref|YP_003908780.1| major facilitator superfamily protein [Burkholderia sp. CCGE1003] gb|ADN59489.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1003] Length = 438 Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 277/427 (64%), Positives = 355/427 (83%) Query: 3 TIQDDKRLEQETVRKVTWRLLPFLMLCYLFAFIDRGNIGMAALQMNHDIGLSPKMFGFAS 62 +I + LE +T+RKV WRLLPFLM+CYL AFIDRGN+GMA+LQMNHDIG+S K+FGF + Sbjct: 2 SIASNATLEHQTMRKVIWRLLPFLMICYLMAFIDRGNVGMASLQMNHDIGMSAKVFGFGA 61 Query: 63 SLFFIAYFIFEVPSNLALQKFGARKWLARIMVTWGLISACTAFVQGPTSLYFVRFILGAA 122 SLFF++YFI EVPSNLAL+K+GAR W+ARIM+TWGL+SA TA V T+ Y +RF+LGAA Sbjct: 62 SLFFVSYFICEVPSNLALEKYGARVWIARIMITWGLVSAATALVHNATTFYILRFLLGAA 121 Query: 123 EAGFFPGVVLYLTYWVPSAYRARIVALFMVAIPAASFVASPVSALLLQMDGIGGLRGWHW 182 EAGF PGV+LYL+YWVP AYRAR+VA FMV+IPAASF+ SP+SALLLQMDG+ GLRGWHW Sbjct: 122 EAGFAPGVLLYLSYWVPKAYRARVVATFMVSIPAASFIGSPISALLLQMDGLAGLRGWHW 181 Query: 183 LFLLEGLPTVLLGVVCLFFLTDRPDQARWLNDAQRQWLVATMNKEAASRTAKQHIPLWKL 242 LF+LEGLPTVLLG+ CLF LTD+P +A WLN+ +R WL+ + E+A +PL +L Sbjct: 182 LFILEGLPTVLLGIACLFMLTDKPAKATWLNEDERTWLLGALAAESAQPKKVAAMPLTRL 241 Query: 243 FSQPHVWGMALVCACASAAGSVLNVWQPQLLKSFGLTVMQTGLVNSIPYLVASVLMVWWG 302 F +V +ALV CASAAGS L+VWQPQLLKS+GL+V+QTG++N++PY +AS+LM++WG Sbjct: 242 FRNRYVLCLALVDTCASAAGSTLSVWQPQLLKSYGLSVLQTGMLNAVPYALASILMIFWG 301 Query: 303 RHSDRTGERRWHTAIPLILIGGGLALASLANTLAPVVLLLTMVLIGAYSFKGPFWAMAST 362 RHSDRT E RWHT +P+++IGGGL SL+ +L P V +L VLIGAY+FKGPFWA+AS Sbjct: 302 RHSDRTKEHRWHTVVPMLMIGGGLFATSLSGSLLPTVCMLCSVLIGAYAFKGPFWALASD 361 Query: 363 WLATGSVAAGLAGINAVSNLIGGGLMVNVYGWVKDATGSFALALLPLVGLSVLSVAILLF 422 L+ ++AAGLA +NA++NL+GGGLMVNVYGWVK+ATGS++LAL+PL L+++SVA LL Sbjct: 362 MLSNSTIAAGLATVNAIANLLGGGLMVNVYGWVKEATGSYSLALMPLGILTLVSVATLLI 421 Query: 423 LSRKSRT 429 L+RK ++ Sbjct: 422 LTRKGQS 428 >ref|YP_002235183.1| putative tartrate transporter [Burkholderia cenocepacia J2315] emb|CAR56445.1| putative tartrate transporter [Burkholderia cenocepacia J2315] Length = 440 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 278/416 (66%), Positives = 347/416 (83%) Query: 10 LEQETVRKVTWRLLPFLMLCYLFAFIDRGNIGMAALQMNHDIGLSPKMFGFASSLFFIAY 69 +E+ T+RKV WRL+PFLM+CYL AFIDRGN+GMA+LQMNHD+G+S ++FGF SSLFFI+Y Sbjct: 11 IERRTIRKVVWRLIPFLMICYLLAFIDRGNVGMASLQMNHDLGMSAQVFGFGSSLFFISY 70 Query: 70 FIFEVPSNLALQKFGARKWLARIMVTWGLISACTAFVQGPTSLYFVRFILGAAEAGFFPG 129 F FEVPSNLALQK+GAR W+ARIM+TWG++SA TA V T+ Y +RF+LGAAEAGFFPG Sbjct: 71 FFFEVPSNLALQKYGARIWIARIMITWGIVSAATALVHNATTFYVLRFLLGAAEAGFFPG 130 Query: 130 VVLYLTYWVPSAYRARIVALFMVAIPAASFVASPVSALLLQMDGIGGLRGWHWLFLLEGL 189 V+LYL+YW+P+ YRARIVA FMVAIPAASF+ SP+SALLLQMDG+ GLRGWHWLF+LEG+ Sbjct: 131 VLLYLSYWIPAQYRARIVATFMVAIPAASFIGSPISALLLQMDGVWGLRGWHWLFILEGI 190 Query: 190 PTVLLGVVCLFFLTDRPDQARWLNDAQRQWLVATMNKEAASRTAKQHIPLWKLFSQPHVW 249 PTVLLG+ CLF LT++P+ ARWL+D +R WL + +R +PL +LF +V Sbjct: 191 PTVLLGIACLFMLTNKPENARWLDDDERAWLSNALAAGHKTRKKVPSLPLAQLFRNRYVL 250 Query: 250 GMALVCACASAAGSVLNVWQPQLLKSFGLTVMQTGLVNSIPYLVASVLMVWWGRHSDRTG 309 +ALV CASAAGS L+VWQPQLLKSFGLTVM+TGL+NS+PY VAS+LMV+WGR SDR G Sbjct: 251 CLALVDTCASAAGSTLSVWQPQLLKSFGLTVMETGLLNSVPYAVASILMVYWGRRSDRLG 310 Query: 310 ERRWHTAIPLILIGGGLALASLANTLAPVVLLLTMVLIGAYSFKGPFWAMASTWLATGSV 369 ERRWHT +P++LIG GL SL+ +L P + +L VL+GAYSFKGPFWA+A+ L+ +V Sbjct: 311 ERRWHTVVPMLLIGVGLFATSLSGSLLPTICMLCAVLVGAYSFKGPFWALATDMLSNSTV 370 Query: 370 AAGLAGINAVSNLIGGGLMVNVYGWVKDATGSFALALLPLVGLSVLSVAILLFLSR 425 AAGLA +NA++NL+GGGLMVNVYGWVK ATGS+ALAL+PL L+++SVA LL L+R Sbjct: 371 AAGLATVNAIANLLGGGLMVNVYGWVKAATGSYALALMPLAILTLVSVATLLLLTR 426