BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1930.p (229 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777828.1| demethylmenaquinone methyltransferase [Herba... 369 e-100 ref|ZP_03543805.1| Dimethylmenaquinone methyltransferase [Comamo... 272 3e-71 ref|YP_001789758.1| dimethylmenaquinone methyltransferase [Lepto... 270 2e-70 ref|YP_002787587.1| demethylmenaquinone methyltransferase [Deino... 252 2e-65 ref|YP_004350602.1| dimethylmenaquinone methyltransferase [Burkh... 251 6e-65 >ref|YP_003777828.1| demethylmenaquinone methyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ65920.1| demethylmenaquinone methyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 229 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 218/229 (95%), Positives = 224/229 (97%) Query: 1 MSTQPDFIRDIERVDAAIVAQAAEFPASILADVAGRRGTLCSRVAPLSPSMRVAGPAVTV 60 MSTQPDFIRDIERVDA++VA+AA+FPASILADVAGRRGTLCSRVAPLSPSMRVAGPAVTV Sbjct: 1 MSTQPDFIRDIERVDASVVAKAAQFPASILADVAGRRGTLCSRVAPLSPSMRVAGPAVTV 60 Query: 61 EVRPGDNLMIHAAMAIAKPGDVLVIDGKGDETCALMGEIMVSQCKASGLAGIIIYGSVRD 120 EVRPGDNLMIHAAMAIAKPGDVLVIDGKGDETCALMGEIMVSQCKASGLAGIIIYGSVRD Sbjct: 61 EVRPGDNLMIHAAMAIAKPGDVLVIDGKGDETCALMGEIMVSQCKASGLAGIIIYGSVRD 120 Query: 121 TEAIRAIDFPVYAVGANPNGPTKNIAGRVNWPVSVGGTAVQPGDLIVGDADGVVVVEREK 180 EAIR I FPVYAVGANPNGPTKNIAGRVNWP+SVGGTAVQPGDLIVGDADGVVVVEREK Sbjct: 121 IEAIREIGFPVYAVGANPNGPTKNIAGRVNWPISVGGTAVQPGDLIVGDADGVVVVEREK 180 Query: 181 AASLLAAAAKKVADETKRLTEIRGGGPLRPAWLEGALRKGGVLAEGESL 229 A SLL AAAKKVADETKRLTEIRGGGPLRP+WLEGALRKGGVLAEGESL Sbjct: 181 AGSLLEAAAKKVADETKRLTEIRGGGPLRPSWLEGALRKGGVLAEGESL 229 >ref|ZP_03543805.1| Dimethylmenaquinone methyltransferase [Comamonas testosteroni KF-1] gb|EED68091.1| Dimethylmenaquinone methyltransferase [Comamonas testosteroni KF-1] Length = 232 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 149/225 (66%), Positives = 182/225 (80%) Query: 5 PDFIRDIERVDAAIVAQAAEFPASILADVAGRRGTLCSRVAPLSPSMRVAGPAVTVEVRP 64 PD +R+IERVDA +VAQAA+FP+SILADVAGRRG L R+APL+P MR AGPA+TVEVRP Sbjct: 8 PDVVRNIERVDAQVVAQAAQFPSSILADVAGRRGGLHGRIAPLAPGMRFAGPAITVEVRP 67 Query: 65 GDNLMIHAAMAIAKPGDVLVIDGKGDETCALMGEIMVSQCKASGLAGIIIYGSVRDTEAI 124 GDNLMIHAAMA+A+PGDV+V+DGKGD + ALMGEIM QC A G+A ++I G+VRD+EAI Sbjct: 68 GDNLMIHAAMAVAQPGDVIVVDGKGDLSSALMGEIMSQQCMALGIAAVVIDGAVRDSEAI 127 Query: 125 RAIDFPVYAVGANPNGPTKNIAGRVNWPVSVGGTAVQPGDLIVGDADGVVVVEREKAASL 184 R + FP+YA G NPNGPTK + GR+N P+ VGG V PGDL+VGDADGV V+ER KAA++ Sbjct: 128 RELGFPMYAAGLNPNGPTKFVPGRLNHPICVGGVTVCPGDLVVGDADGVTVIERTKAAAM 187 Query: 185 LAAAAKKVADETKRLTEIRGGGPLRPAWLEGALRKGGVLAEGESL 229 L A KVA ETKR+ +IR L PAWL+ +LR GV+ EGE+L Sbjct: 188 LPLAVSKVAAETKRIADIRNRKALAPAWLDASLRSAGVIREGETL 232 >ref|YP_001789758.1| dimethylmenaquinone methyltransferase [Leptothrix cholodnii SP-6] gb|ACB32993.1| Dimethylmenaquinone methyltransferase [Leptothrix cholodnii SP-6] Length = 232 Score = 270 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 154/225 (68%), Positives = 187/225 (83%) Query: 5 PDFIRDIERVDAAIVAQAAEFPASILADVAGRRGTLCSRVAPLSPSMRVAGPAVTVEVRP 64 PD IR IERVDAA VA AA++P+SILADVAGRRG L R+APL+PSMR AGPA+TVEVRP Sbjct: 8 PDVIRSIERVDAATVAAAAQYPSSILADVAGRRGALSGRIAPLAPSMRFAGPAITVEVRP 67 Query: 65 GDNLMIHAAMAIAKPGDVLVIDGKGDETCALMGEIMVSQCKASGLAGIIIYGSVRDTEAI 124 GDNLMIHAAMA+A+ GDVLVIDGKGD + ALMGEIM QC A G+ G++I G+VRD+EAI Sbjct: 68 GDNLMIHAAMAVAQAGDVLVIDGKGDLSSALMGEIMSQQCVALGIVGVVIDGAVRDSEAI 127 Query: 125 RAIDFPVYAVGANPNGPTKNIAGRVNWPVSVGGTAVQPGDLIVGDADGVVVVEREKAASL 184 R + FP+YA G NPNGPTK+IAGR+N P+S+GG +V PGDL+VGDADGV V+ER+KAA++ Sbjct: 128 RELGFPMYAAGLNPNGPTKSIAGRLNHPISIGGVSVNPGDLVVGDADGVTVIERDKAAAM 187 Query: 185 LAAAAKKVADETKRLTEIRGGGPLRPAWLEGALRKGGVLAEGESL 229 L AA+KVA ET+R+ +IR LRP WL+ ALR GV+ EGE+L Sbjct: 188 LPLAAEKVAAETRRIADIRSRKALRPGWLDAALRAAGVIKEGETL 232 >ref|YP_002787587.1| demethylmenaquinone methyltransferase [Deinococcus deserti VCD115] gb|ACO48083.1| putative demethylmenaquinone methyltransferase [Deinococcus deserti VCD115] Length = 231 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 143/221 (64%), Positives = 168/221 (76%) Query: 5 PDFIRDIERVDAAIVAQAAEFPASILADVAGRRGTLCSRVAPLSPSMRVAGPAVTVEVRP 64 P F +ER +V +A+ F ASILADVAGRRGT+ RV L+PSMRVAGPA+TVEVRP Sbjct: 7 PYFQNHVERTSPELVTRASGFAASILADVAGRRGTMHGRVRALAPSMRVAGPAITVEVRP 66 Query: 65 GDNLMIHAAMAIAKPGDVLVIDGKGDETCALMGEIMVSQCKASGLAGIIIYGSVRDTEAI 124 GDNLMIHAAMAIA+PGDVLVIDGKGD+TCALMGEIM+SQC A GLAG+II +VRD+ I Sbjct: 67 GDNLMIHAAMAIAQPGDVLVIDGKGDQTCALMGEIMISQCMALGLAGVIIDAAVRDSAEI 126 Query: 125 RAIDFPVYAVGANPNGPTKNIAGRVNWPVSVGGTAVQPGDLIVGDADGVVVVEREKAASL 184 +A+ FPV++VG NPNGPTK + GRVN +S GG V+PGDL+V DADGV V ERE+ +L Sbjct: 127 QALGFPVFSVGTNPNGPTKFVPGRVNHTISAGGVTVRPGDLVVADADGVFVAEREQVEAL 186 Query: 185 LAAAAKKVADETKRLTEIRGGGPLRPAWLEGALRKGGVLAE 225 L A KKV E+ RL +IR G L P WL AL GVL E Sbjct: 187 LPLAQKKVDSESARLQDIRSGRNLTPGWLAAALAAAGVLEE 227 >ref|YP_004350602.1| dimethylmenaquinone methyltransferase [Burkholderia gladioli BSR3] gb|AEA65090.1| dimethylmenaquinone methyltransferase [Burkholderia gladioli BSR3] Length = 232 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 142/221 (64%), Positives = 176/221 (79%), Gaps = 1/221 (0%) Query: 9 RDIERVDAAIVAQAAEFPASILADVAGRRGTLCSRVAPLSPSMRVAGPAVTVEVRPGDNL 68 R IERV +VA A +F A+ILADVAGRRGT+ RV LSP+M+VAGPA+TVEVRPGDNL Sbjct: 13 RHIERVSPELVAAAGKFQAAILADVAGRRGTINGRVKALSPTMKVAGPAITVEVRPGDNL 72 Query: 69 MIHAAMAIAKPGDVLVIDGKGDETCALMGEIMVSQCKASGLAGIIIYGSVRDTEAIRAID 128 IHAA+A+A+PGDV+V+DGKGD++CAL+GEIM SQ KASGLAG +I +VRD+ + D Sbjct: 73 AIHAALAVAQPGDVIVVDGKGDQSCALIGEIMASQAKASGLAGFVIDAAVRDSHELATWD 132 Query: 129 FPVYAVGANPNGPTKNIAGRVNWPVSVGGTAVQPGDLIVGDADGVVVVEREKAASLLAAA 188 FPV++VG NP GPTK++AGR+N+P+SVGG AV PGDLIVGDADGVVV+ R+ A ++ A Sbjct: 133 FPVFSVGTNPCGPTKSVAGRLNFPISVGGAAVNPGDLIVGDADGVVVIPRDDVARIVDLA 192 Query: 189 AKKVADETKRLTEIRGGGPLRPAWLEGALRKGGVLAEGESL 229 AKK+A ET RL I G LRP W+E LR G+LAEGE+L Sbjct: 193 AKKLASETARLAGI-AKGELRPTWIEKELRAAGMLAEGEAL 232