BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1929.p (306 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777829.1| gluconolactonase [Herbaspirillum seropedicae... 605 e-171 ref|YP_004701240.1| SMP-30/gluconolaconase/LRE domain-containing... 474 e-132 ref|YP_001772350.1| SMP-30/gluconolaconase/LRE domain-containing... 461 e-128 ref|YP_001756789.1| SMP-30/gluconolaconase/LRE domain-containing... 458 e-127 ref|YP_002494952.1| SMP-30/gluconolaconase/LRE domain-containing... 457 e-126 >ref|YP_003777829.1| gluconolactonase [Herbaspirillum seropedicae SmR1] gb|ADJ65921.1| gluconolactonase protein [Herbaspirillum seropedicae SmR1] Length = 306 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 299/306 (97%), Positives = 303/306 (99%) Query: 1 MSFFAPPPTVEASVFTRLPDHFRTPRKNAWGDANRGGLPIDSFLEGPSFDRQGRLYVTDI 60 MSFFAPPP VEASVFTRLP+HFRTPRKNAWGDANRGGLPIDSFLEGPSFDRQGRLYVTDI Sbjct: 1 MSFFAPPPVVEASVFTRLPEHFRTPRKNAWGDANRGGLPIDSFLEGPSFDRQGRLYVTDI 60 Query: 61 PYGRIFRISMDGQWELVTEYDGWPNGLKIDKSGRIVITDYKRGLVQLDPDTGTVTPLLET 120 PYGRIFRI+MDGQWELVTEYDGWPNGLKIDK+GRIVITDYKRGLVQLDPDTGTVTPLLET Sbjct: 61 PYGRIFRITMDGQWELVTEYDGWPNGLKIDKTGRIVITDYKRGLVQLDPDTGTVTPLLET 120 Query: 121 VGSEGFKGVNDLVFGPKGEIYFTDQGQTGLQDATGRVYRLAPDGQLTCLINTIPSPNGIV 180 VGSEGFKGVNDLVFGPKGEIYFTDQGQTGLQD TGRVYRLAPDGQLTCLINTIPSPNGIV Sbjct: 121 VGSEGFKGVNDLVFGPKGEIYFTDQGQTGLQDPTGRVYRLAPDGQLTCLINTIPSPNGIV 180 Query: 181 YDPALNHLLVAVTRAQQIWRIPLHHNGVVGKVGVFANLHGGMAGPDGLALDAESCLYIAH 240 YDPALNHLLVAVTRAQQIWRIPLHHNGVVGKVGVFANLHGGMAGPDGLALDAES LYIAH Sbjct: 181 YDPALNHLLVAVTRAQQIWRIPLHHNGVVGKVGVFANLHGGMAGPDGLALDAESNLYIAH 240 Query: 241 TGFGSIWRLSKFAEPLLRIRSTAGISTTNLAFGGPDGKSLFITESQTGSILRADVPVAGL 300 TGFGSIWRLSKFAEPLLRIRS+AGISTTNLAFGGPDGKSLFITESQTGSILRADVPVAGL Sbjct: 241 TGFGSIWRLSKFAEPLLRIRSSAGISTTNLAFGGPDGKSLFITESQTGSILRADVPVAGL 300 Query: 301 PMYSHA 306 PMYSHA Sbjct: 301 PMYSHA 306 >ref|YP_004701240.1| SMP-30/gluconolaconase/LRE domain-containing protein [Pseudomonas putida S16] gb|AEJ12360.1| SMP-30/gluconolaconase/LRE domain-containing protein [Pseudomonas putida S16] Length = 306 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 230/306 (75%), Positives = 258/306 (84%) Query: 1 MSFFAPPPTVEASVFTRLPDHFRTPRKNAWGDANRGGLPIDSFLEGPSFDRQGRLYVTDI 60 MSFFA PPTVE +VFTRLPD FR PR AW +ANR G IDSFLEGPSFDRQGRLYVTDI Sbjct: 1 MSFFAAPPTVETTVFTRLPDRFRDPRPTAWANANRQGRAIDSFLEGPSFDRQGRLYVTDI 60 Query: 61 PYGRIFRISMDGQWELVTEYDGWPNGLKIDKSGRIVITDYKRGLVQLDPDTGTVTPLLET 120 P GRIFRIS G+WELV +YDGWPNGLKI + GRI ITDYKRG++ LDPDTG + LL++ Sbjct: 61 PNGRIFRISPQGEWELVCQYDGWPNGLKIHQDGRIFITDYKRGIMLLDPDTGAIEALLDS 120 Query: 121 VGSEGFKGVNDLVFGPKGEIYFTDQGQTGLQDATGRVYRLAPDGQLTCLINTIPSPNGIV 180 GSEGFKGVNDLVF P G++YFTDQGQTGLQDA+GRVY+L G LTCL+ TIPSPNGIV Sbjct: 121 AGSEGFKGVNDLVFAPNGDLYFTDQGQTGLQDASGRVYKLDASGNLTCLLGTIPSPNGIV 180 Query: 181 YDPALNHLLVAVTRAQQIWRIPLHHNGVVGKVGVFANLHGGMAGPDGLALDAESCLYIAH 240 YDP LNHLLVAVTRAQQIWRIPL + ++GKVGVFA LHGG+ GPDGLALDA+S LYIAH Sbjct: 181 YDPHLNHLLVAVTRAQQIWRIPLGNGSIIGKVGVFAQLHGGLGGPDGLALDAQSNLYIAH 240 Query: 241 TGFGSIWRLSKFAEPLLRIRSTAGISTTNLAFGGPDGKSLFITESQTGSILRADVPVAGL 300 TGFGS+W+LSK AEPL RI S AGIS TNLAFGG DG++L+ITES+TGSIL+ GL Sbjct: 241 TGFGSVWKLSKVAEPLQRIVSCAGISNTNLAFGGNDGQTLYITESETGSILQVRTTAPGL 300 Query: 301 PMYSHA 306 PMYSH+ Sbjct: 301 PMYSHS 306 >ref|YP_001772350.1| SMP-30/gluconolaconase/LRE domain-containing protein [Methylobacterium sp. 4-46] gb|ACA19916.1| SMP-30/Gluconolaconase/LRE domain protein [Methylobacterium sp. 4-46] Length = 306 Score = 461 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 222/306 (72%), Positives = 255/306 (83%) Query: 1 MSFFAPPPTVEASVFTRLPDHFRTPRKNAWGDANRGGLPIDSFLEGPSFDRQGRLYVTDI 60 MSFFAPPP V A +FTRLPD FR PR AW +ANRGG IDSFLEGP FDR GRLYVTDI Sbjct: 1 MSFFAPPPAVTAEIFTRLPDRFRNPRPTAWANANRGGHAIDSFLEGPVFDRAGRLYVTDI 60 Query: 61 PYGRIFRISMDGQWELVTEYDGWPNGLKIDKSGRIVITDYKRGLVQLDPDTGTVTPLLET 120 P+GRIFRI G+WEL+ EYDGWPNGLKI + GRI IT YKRG++ LDPD+G+VTP LET Sbjct: 61 PHGRIFRIDPAGEWELIAEYDGWPNGLKIHRDGRIFITCYKRGIMLLDPDSGSVTPFLET 120 Query: 121 VGSEGFKGVNDLVFGPKGEIYFTDQGQTGLQDATGRVYRLAPDGQLTCLINTIPSPNGIV 180 GSEGFKGVNDL F G++YFTDQGQTGLQD TGRVYRL P G+LTCLI+T+PSPNGIV Sbjct: 121 AGSEGFKGVNDLSFAGNGDLYFTDQGQTGLQDPTGRVYRLRPSGELTCLIDTVPSPNGIV 180 Query: 181 YDPALNHLLVAVTRAQQIWRIPLHHNGVVGKVGVFANLHGGMAGPDGLALDAESCLYIAH 240 D A+ +L VAVTRAQQIWRIPL+ +G+V KVGVF+ LHGG+ GPDG+ALDAE CL +AH Sbjct: 181 IDTAMQNLFVAVTRAQQIWRIPLNASGLVAKVGVFSQLHGGLGGPDGIALDAEGCLLVAH 240 Query: 241 TGFGSIWRLSKFAEPLLRIRSTAGISTTNLAFGGPDGKSLFITESQTGSILRADVPVAGL 300 TGFGS+WRLS AEP+LR+RS AGISTTN+A+GG DG +LFITESQTGSIL A +P G Sbjct: 241 TGFGSVWRLSPVAEPILRVRSPAGISTTNIAYGGQDGATLFITESQTGSILTARMPAPGQ 300 Query: 301 PMYSHA 306 ++SHA Sbjct: 301 ALFSHA 306 >ref|YP_001756789.1| SMP-30/gluconolaconase/LRE domain-containing protein [Methylobacterium radiotolerans JCM 2831] gb|ACB26106.1| SMP-30/Gluconolaconase/LRE domain protein [Methylobacterium radiotolerans JCM 2831] Length = 306 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 224/305 (73%), Positives = 252/305 (82%) Query: 1 MSFFAPPPTVEASVFTRLPDHFRTPRKNAWGDANRGGLPIDSFLEGPSFDRQGRLYVTDI 60 MSFFAPPP V A VFTRLPD FR R AW +ANRGG IDSFLEGP FDR GRLYVTDI Sbjct: 1 MSFFAPPPAVTAEVFTRLPDRFRKVRPTAWANANRGGHAIDSFLEGPVFDRAGRLYVTDI 60 Query: 61 PYGRIFRISMDGQWELVTEYDGWPNGLKIDKSGRIVITDYKRGLVQLDPDTGTVTPLLET 120 P+GRIFRI G+WELV EYDGWPNGLKI + GRI IT Y+RGL+ LDPDTG VTP LET Sbjct: 61 PFGRIFRIDPAGEWELVAEYDGWPNGLKIHRDGRIFITCYRRGLMLLDPDTGAVTPFLET 120 Query: 121 VGSEGFKGVNDLVFGPKGEIYFTDQGQTGLQDATGRVYRLAPDGQLTCLINTIPSPNGIV 180 GSEGF+GVNDL F G++YFTDQGQTGLQD TGRVYRL P G+LTCL++TIPSPNGIV Sbjct: 121 AGSEGFRGVNDLTFARNGDLYFTDQGQTGLQDPTGRVYRLRPSGELTCLVDTIPSPNGIV 180 Query: 181 YDPALNHLLVAVTRAQQIWRIPLHHNGVVGKVGVFANLHGGMAGPDGLALDAESCLYIAH 240 D A+ L VAVTRAQQIWR+PL+ +G+V KVGVFA LHGG+ GPDG+ALDAE CL +AH Sbjct: 181 IDDAMGSLFVAVTRAQQIWRVPLNASGLVAKVGVFAQLHGGLGGPDGIALDAEGCLIVAH 240 Query: 241 TGFGSIWRLSKFAEPLLRIRSTAGISTTNLAFGGPDGKSLFITESQTGSILRADVPVAGL 300 TGFGSIWRLS AEPLLR++S AGISTTN+A+GGPDG +LFITESQTGSIL A +P G Sbjct: 241 TGFGSIWRLSPVAEPLLRVKSPAGISTTNVAYGGPDGATLFITESQTGSILTARMPAPGQ 300 Query: 301 PMYSH 305 ++SH Sbjct: 301 TLFSH 305 >ref|YP_002494952.1| SMP-30/gluconolaconase/LRE domain-containing protein [Methylobacterium nodulans ORS 2060] gb|ACL62460.1| SMP-30/Gluconolaconase/LRE domain protein [Methylobacterium nodulans ORS 2060] Length = 306 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 222/305 (72%), Positives = 252/305 (82%) Query: 1 MSFFAPPPTVEASVFTRLPDHFRTPRKNAWGDANRGGLPIDSFLEGPSFDRQGRLYVTDI 60 MSFFAPPPTV A +FTRLPD FR PR AW ANRGG IDSFLEGP FDR GRLYVTDI Sbjct: 1 MSFFAPPPTVTAEIFTRLPDRFRKPRPTAWATANRGGHAIDSFLEGPVFDRAGRLYVTDI 60 Query: 61 PYGRIFRISMDGQWELVTEYDGWPNGLKIDKSGRIVITDYKRGLVQLDPDTGTVTPLLET 120 P+GRIFRI +G WELV EYDGWPNGLKI + GRI IT YKRG++ LDP+ G+VTP LET Sbjct: 61 PFGRIFRIDPNGTWELVAEYDGWPNGLKIHRDGRIFITCYKRGIMLLDPEAGSVTPFLET 120 Query: 121 VGSEGFKGVNDLVFGPKGEIYFTDQGQTGLQDATGRVYRLAPDGQLTCLINTIPSPNGIV 180 GSEGF+GVNDL F G++YFTDQGQTGLQD TGRVYRL P G+LTCLI+T+PSPNGIV Sbjct: 121 AGSEGFRGVNDLTFAQNGDLYFTDQGQTGLQDPTGRVYRLRPSGELTCLIDTVPSPNGIV 180 Query: 181 YDPALNHLLVAVTRAQQIWRIPLHHNGVVGKVGVFANLHGGMAGPDGLALDAESCLYIAH 240 D A+ +L VAVTRAQQIWRIPL +G+V KVGVF+ LHGGM GPDG+ALDAE CL +AH Sbjct: 181 IDSAMTNLFVAVTRAQQIWRIPLGTSGLVSKVGVFSQLHGGMGGPDGIALDAEGCLVVAH 240 Query: 241 TGFGSIWRLSKFAEPLLRIRSTAGISTTNLAFGGPDGKSLFITESQTGSILRADVPVAGL 300 TGFGSIWRLS AEP+LR++S AGISTTN+A+GGPD +LFITESQTGSIL A +P G Sbjct: 241 TGFGSIWRLSPVAEPILRVKSPAGISTTNIAYGGPDHATLFITESQTGSILTARMPAPGQ 300 Query: 301 PMYSH 305 ++SH Sbjct: 301 ELFSH 305