BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1927.p (315 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777831.1| amidohydrolase 2 [Herbaspirillum seropedicae... 513 e-143 ref|ZP_03585357.1| amidohydrolase 2 [Burkholderia multivorans CG... 272 6e-71 ref|YP_550616.1| amidohydrolase 2 [Polaromonas sp. JS666] >gi|91... 271 7e-71 ref|YP_625319.1| amidohydrolase 2 [Burkholderia cenocepacia AU 1... 268 8e-70 ref|ZP_04943086.1| hypothetical protein BCPG_04639 [Burkholderia... 268 1e-69 >ref|YP_003777831.1| amidohydrolase 2 [Herbaspirillum seropedicae SmR1] emb|CAP19685.1| amidohydrolase 2 protein [Herbaspirillum seropedicae] gb|ADJ65923.1| amidohydrolase 2 (2-pyrone-4,6-dicarboxylic acid hydrolase) protein [Herbaspirillum seropedicae SmR1] Length = 315 Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats. Identities = 267/315 (84%), Positives = 288/315 (91%) Query: 1 MQDLPSRRAFLRHSTRLALGLGAIAQLPLARAQTEPYAHSAGTQHAASRLPADACDCHMH 60 MQDLPSRR FLR S +LAL LGA LP A AQ + Y HS+G+Q AASRLP DACDCHMH Sbjct: 1 MQDLPSRRDFLRRSGQLALSLGAAMHLPHALAQADAYPHSSGSQRAASRLPDDACDCHMH 60 Query: 61 IYDPRFAWAPGAKLLHAPATVPMYRRLQQRLGTTRNVVVTPSAYGVDNSCTLDALAQLGA 120 IYDPRFAWAPGAKL+HAPATV MYR+LQQRLGTTRNVVVTPSAYGVDNSCTLDALAQLG Sbjct: 61 IYDPRFAWAPGAKLVHAPATVAMYRQLQQRLGTTRNVVVTPSAYGVDNSCTLDALAQLGR 120 Query: 121 TARGVAVVNDQVSDAELQRLHQAGVRGLRFNLALGSVTTVEMMEPLARRVAALGWHLQVN 180 +ARGVAVVNDQVSDAELQRLHQAGVRGLRFNLA+GSVTTVEMMEPLARR+A LGWHLQ N Sbjct: 121 SARGVAVVNDQVSDAELQRLHQAGVRGLRFNLAVGSVTTVEMMEPLARRMAPLGWHLQAN 180 Query: 181 MPNDVLLANRALLSALPVPLVFDHFARIPLQAGPGHPVFDFVTGLMREQRASVKLSGAYL 240 MPN+VLLA+RA+L+ LPVPLVFDHFARIPLQA HPVFDFVTGLMRE+RASVKLSGAYL Sbjct: 181 MPNEVLLAHRAMLARLPVPLVFDHFARIPLQADATHPVFDFVTGLMRERRASVKLSGAYL 240 Query: 241 YSKRGAPDYEDVAPLARTLVQTAPSQVVWGSDWPHPTEQHKPDDARLLDVMTTWLGSDAM 300 YSKRGAPDY+DVAPLAR LVQ AP+Q+VWGSDWPHPTEQHKPDDARLLDVM +WLGS+ M Sbjct: 241 YSKRGAPDYDDVAPLARALVQLAPTQLVWGSDWPHPTEQHKPDDARLLDVMISWLGSEEM 300 Query: 301 LRTILVDNPARLYQF 315 +RT+LV NPARLYQF Sbjct: 301 VRTVLVANPARLYQF 315 >ref|ZP_03585357.1| amidohydrolase 2 [Burkholderia multivorans CGD1] gb|EED99948.1| amidohydrolase 2 [Burkholderia multivorans CGD1] Length = 310 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 146/279 (52%), Positives = 182/279 (65%), Gaps = 1/279 (0%) Query: 38 AHSAGTQHAASRLPADACDCHMHIYDPRFAWAPGAKLLHAPATVPMYRRLQQRLGTTRNV 97 A S+G++ A RLP A DCHMHIYD RF APG L ATV YR LQ RLG RNV Sbjct: 31 AWSSGSERPAFRLPEGAIDCHMHIYDDRFPVAPGTTLRPPNATVAQYRSLQARLGVKRNV 90 Query: 98 VVTPSAYGVDNSCTLDALAQLGATARGVAVVNDQVSDAELQRLHQAGVRGLRFNLALGSV 157 VVTPS YG DN CTL A+AQ G ARGVAVV+ VSD EL+ L + G+R +RFNL+ Sbjct: 91 VVTPSTYGTDNRCTLAAIAQFGDDARGVAVVDSTVSDDELRALDRGGIRAIRFNLSYPGA 150 Query: 158 TTVEMMEPLARRVAALGWHLQVNMPNDVLLANRALLSALPVPLVFDHFARIPLQAGPGHP 217 TT++M+ PLA R+A LGWH+++ M L L+ALP PLV DH A +P G Sbjct: 151 TTLDMLAPLAARIADLGWHIELVMQGARLPGLERHLAALPCPLVIDHIAHVPQPGGLSSA 210 Query: 218 VFDFVTGLMREQRASVKLSGAYLYSKRGAPDYEDVAPLARTLVQTAPSQVVWGSDWPHPT 277 F V L+ + V LSG Y+ SK GAP YEDVAP+A+TL+ AP +++WG+DWPHPT Sbjct: 211 AFRAVQRLVEKGNTWVTLSGPYVDSKTGAPAYEDVAPVAKTLIDMAPERMLWGTDWPHPT 270 Query: 278 EQ-HKPDDARLLDVMTTWLGSDAMLRTILVDNPARLYQF 315 ++ KPDDA +LDV+ W+G R I V NP +LY+F Sbjct: 271 QKTDKPDDASMLDVIAGWIGRPDWQRLIFVTNPTKLYRF 309 >ref|YP_550616.1| amidohydrolase 2 [Polaromonas sp. JS666] gb|ABE45718.1| amidohydrolase 2 [Polaromonas sp. JS666] Length = 304 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 143/279 (51%), Positives = 185/279 (66%), Gaps = 3/279 (1%) Query: 40 SAGTQHAASRLPADACDCHMHIYDPRFAWAPGAKLLHAPATVPMYRRLQQRLGTTRNVVV 99 S+G+ R+P A DCH HIYD R+ A A L A A + YR LQ R+GTTRNV+V Sbjct: 25 SSGSNSPGIRVPPGAIDCHHHIYDARYPAAENATLRPADALIADYRALQARIGTTRNVIV 84 Query: 100 TPSAYGVDNSCTLDALAQLG-ATARGVAVVNDQVSDAELQRLHQAGVRGLRFNLALGSVT 158 PS YGVDN +++LA G ARGVAVVN V+D EL++LH AGVRG+RFNLA T Sbjct: 85 QPSTYGVDNRLLVESLAAFGLENARGVAVVNTSVTDGELKQLHDAGVRGIRFNLAPPGTT 144 Query: 159 TVEMMEPLARRVAALGWHLQVNMPNDVLLANRALLSALPVPLVFDHFARIPLQAGPGHPV 218 T++M+ PLARR+A +GWH+Q+N P+ LL +++ S LPVP+VFDH R+P HP Sbjct: 145 TLDMVRPLARRIAPMGWHIQLNAPSAALLDAKSVWSDLPVPVVFDHLGRVPQPGAANHPT 204 Query: 219 FDFVTGLMREQRASVKLSGAYLYSKRGAPDYEDVAPLARTLVQTAPSQVVWGSDWPHPTE 278 F + GL+++ +A VKLSG Y S G P Y D +A + AP +VVWGSDWPHPTE Sbjct: 205 FAMIRGLLQQGKAYVKLSGFYNESNVGYPSYSDSVQVATLYAKEAPERVVWGSDWPHPTE 264 Query: 279 QHK--PDDARLLDVMTTWLGSDAMLRTILVDNPARLYQF 315 + K PDDA L+D+++ + +A ILVD PARLYQF Sbjct: 265 KDKGYPDDAHLIDLLSEVVPDEAARHRILVDTPARLYQF 303 >ref|YP_625319.1| amidohydrolase 2 [Burkholderia cenocepacia AU 1054] ref|YP_839015.1| amidohydrolase 2 [Burkholderia cenocepacia HI2424] gb|ABF80346.1| amidohydrolase 2 [Burkholderia cenocepacia AU 1054] gb|ABK12122.1| amidohydrolase 2 [Burkholderia cenocepacia HI2424] Length = 310 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 153/311 (49%), Positives = 195/311 (62%), Gaps = 7/311 (2%) Query: 6 SRRAFLRHSTRLALGLGAIAQLPLARAQTEPYAHSAGTQHAASRLPADACDCHMHIYDPR 65 +RR FLR +A A A LP A E + S+GT+ A RLP A DCHMHIYD R Sbjct: 5 ARRGFLR----IAGATLASAALPRLAAADETW--SSGTERPAFRLPDGAIDCHMHIYDDR 58 Query: 66 FAWAPGAKLLHAPATVPMYRRLQQRLGTTRNVVVTPSAYGVDNSCTLDALAQLGATARGV 125 F APG L ATV YR +Q R+G RNVVVTPS YG DN CTL A+AQ GA ARGV Sbjct: 59 FPVAPGTTLRPPNATVAQYRSVQARIGVKRNVVVTPSTYGTDNRCTLAAIAQFGADARGV 118 Query: 126 AVVNDQVSDAELQRLHQAGVRGLRFNLALGSVTTVEMMEPLARRVAALGWHLQVNMPNDV 185 AVV+ VSD EL+ L + G+R +RFNL+ TT++M+ PLA R+A LGWH+++ + Sbjct: 119 AVVDGTVSDDELRALDRGGIRAIRFNLSYPGATTLDMLAPLAARIANLGWHIELVVQGAR 178 Query: 186 LLANRALLSALPVPLVFDHFARIPLQAGPGHPVFDFVTGLMREQRASVKLSGAYLYSKRG 245 L L+ALP PLV DH A +P G F L+ + + LSG Y+ SK G Sbjct: 179 LPELEPHLAALPCPLVIDHIAHVPQPGGLSSAAFRTAQRLVEKGHTWITLSGPYVDSKTG 238 Query: 246 APDYEDVAPLARTLVQTAPSQVVWGSDWPHPTEQ-HKPDDARLLDVMTTWLGSDAMLRTI 304 AP Y+DVAP+A+ L+ AP +++WG+DWPHPT++ KPDDA LLDV+ W+G + I Sbjct: 239 APAYDDVAPVAKALIDMAPERMLWGTDWPHPTQKTDKPDDASLLDVIAGWIGRPDWQQRI 298 Query: 305 LVDNPARLYQF 315 V NPA+LY F Sbjct: 299 FVTNPAKLYGF 309 >ref|ZP_04943086.1| hypothetical protein BCPG_04639 [Burkholderia cenocepacia PC184] gb|EAY66257.1| hypothetical protein BCPG_04639 [Burkholderia cenocepacia PC184] Length = 358 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 153/311 (49%), Positives = 194/311 (62%), Gaps = 7/311 (2%) Query: 6 SRRAFLRHSTRLALGLGAIAQLPLARAQTEPYAHSAGTQHAASRLPADACDCHMHIYDPR 65 +RR FLR +A A A LP A E + S+GT+ A RLP DCHMHIYD R Sbjct: 53 ARRGFLR----IAGATLASAALPRLAAADETW--SSGTERPAFRLPDGTIDCHMHIYDDR 106 Query: 66 FAWAPGAKLLHAPATVPMYRRLQQRLGTTRNVVVTPSAYGVDNSCTLDALAQLGATARGV 125 F APG L ATV YR +Q R+G RNVVVTPS YG DN CTL A+AQ GA ARGV Sbjct: 107 FPVAPGTTLRPPNATVAQYRSVQARIGVKRNVVVTPSTYGTDNRCTLAAIAQFGADARGV 166 Query: 126 AVVNDQVSDAELQRLHQAGVRGLRFNLALGSVTTVEMMEPLARRVAALGWHLQVNMPNDV 185 AVV+ VSD EL+ L + G+R +RFNL+ TT++M+ PLA RVA LGWH+++ + Sbjct: 167 AVVDGTVSDDELRALDRGGIRAIRFNLSYPGATTLDMLAPLAARVANLGWHIELVVQGAR 226 Query: 186 LLANRALLSALPVPLVFDHFARIPLQAGPGHPVFDFVTGLMREQRASVKLSGAYLYSKRG 245 L L+ALP PLV DH A +P G F L+ + + LSG Y+ SK G Sbjct: 227 LPELEPHLAALPCPLVIDHIAHVPQPGGLSSAAFRTAQRLVEKGHTWITLSGPYVDSKTG 286 Query: 246 APDYEDVAPLARTLVQTAPSQVVWGSDWPHPTEQ-HKPDDARLLDVMTTWLGSDAMLRTI 304 AP Y+DVAP+A+ L+ AP +++WG+DWPHPT++ KPDDA LLDV+ W+G + I Sbjct: 287 APAYDDVAPVAKALIDMAPERMLWGTDWPHPTQKTDKPDDASLLDVIAGWIGRPDWQQRI 346 Query: 305 LVDNPARLYQF 315 V NPA+LY F Sbjct: 347 FVTNPAKLYGF 357