BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1908.p (315 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777850.1| nitrate/sulfonate/bicarbonate ABC transporte... 587 e-166 ref|ZP_02884969.1| ABC-type nitrate/sulfonate/bicarbonate transp... 451 e-124 ref|YP_003606121.1| ABC transporter periplasmic binding protein,... 444 e-123 ref|YP_004230967.1| ABC transporter periplasmic-binding protein,... 442 e-122 ref|YP_001860143.1| ABC-type nitrate/sulfonate/bicarbonate trans... 435 e-120 >ref|YP_003777850.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ65942.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 358 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 310/315 (98%), Positives = 314/315 (99%) Query: 1 MPWGEAQAQGILAKWGKKYGITISAVQLNDYVESINQYTAGKFDGCTMTNMDALTIPAAG 60 MPWGEAQAQGILAKWGKKYGITI+AVQLNDYVESINQYTAGKFDGCTMTNMDALTIPAAG Sbjct: 44 MPWGEAQAQGILAKWGKKYGITINAVQLNDYVESINQYTAGKFDGCTMTNMDALTIPAAG 103 Query: 61 GVDSTALIVGDYSNGNDGIVLKGKNKKLADIKGQSVQLVEFSVSHYLLARALETAGLRER 120 GVDSTALIVGDYSNGNDGIVLKGKNKKLADIKGQSVQLVEFSVSHYLLARALETAGLRER Sbjct: 104 GVDSTALIVGDYSNGNDGIVLKGKNKKLADIKGQSVQLVEFSVSHYLLARALETAGLRER 163 Query: 121 DVKVVNTSDADITAAFATPAVTSTVTWNPMLSSIAASPDVSLVYTSKQLPGEIMDLMVVN 180 DVKVVNTSDADITAAFATPAVTSTVTWNPMLSSIAASPDVSLVYTSKQLPGEIMDLMVVN Sbjct: 164 DVKVVNTSDADITAAFATPAVTSTVTWNPMLSSIAASPDVSLVYTSKQLPGEIMDLMVVN 223 Query: 181 TKTLQENPAFGKALTGAWYEMMAIMTAKDERATRALTAMGKASGTDLAGFQSQLAATAMF 240 TKTLQENPAFGKALTGAWYEMMAIM+AKDERATRALTAMGKASGTDLAGFQ+QLAATAMF Sbjct: 224 TKTLQENPAFGKALTGAWYEMMAIMSAKDERATRALTAMGKASGTDLAGFQAQLAATAMF 283 Query: 241 YQPKAALEFATKKELPAIMGRIAKFSFDHGILGPNVKSADGIGVAFDGNVVIGDKKNVKL 300 YQPKAALEFATKKELP IMGRIAKFSFDHGILGPNVKSADGIG+AFDGNVVIGDKKNVKL Sbjct: 284 YQPKAALEFATKKELPGIMGRIAKFSFDHGILGPNVKSADGIGIAFDGNVVIGDKKNVKL 343 Query: 301 RFDPAYMKMAADGKL 315 RFDPAYMKMAADGKL Sbjct: 344 RFDPAYMKMAADGKL 358 >ref|ZP_02884969.1| ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein [Burkholderia graminis C4D1M] gb|EDT09401.1| ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein [Burkholderia graminis C4D1M] Length = 356 Score = 451 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 222/315 (70%), Positives = 271/315 (86%) Query: 1 MPWGEAQAQGILAKWGKKYGITISAVQLNDYVESINQYTAGKFDGCTMTNMDALTIPAAG 60 MPWG+A+ QGI++KW KKYGI + VQLNDYVESINQYTAGKFDGC MTNMDALTIPA+G Sbjct: 42 MPWGQAKTQGIVSKWAKKYGINVDVVQLNDYVESINQYTAGKFDGCAMTNMDALTIPASG 101 Query: 61 GVDSTALIVGDYSNGNDGIVLKGKNKKLADIKGQSVQLVEFSVSHYLLARALETAGLRER 120 GVDSTALIV DYSNGNDG+++KGK K++AD+KG+ + LV+FSVSHYLLARALE+A + ER Sbjct: 102 GVDSTALIVSDYSNGNDGVLIKGKGKQIADLKGKQINLVQFSVSHYLLARALESAHMSER 161 Query: 121 DVKVVNTSDADITAAFATPAVTSTVTWNPMLSSIAASPDVSLVYTSKQLPGEIMDLMVVN 180 D+KVVNTSDADI+ AFATPAV +TVTWNPML+ + A P+V+ V+ S ++PGEIMD+MVVN Sbjct: 162 DLKVVNTSDADISGAFATPAVQNTVTWNPMLADLKAQPNVTEVFDSSKIPGEIMDMMVVN 221 Query: 181 TKTLQENPAFGKALTGAWYEMMAIMTAKDERATRALTAMGKASGTDLAGFQSQLAATAMF 240 TKTL +NPA GKALTGAW+EM+A+M A + ++ ALTAM KASGTDLAGF+ QL+ TA+F Sbjct: 222 TKTLHDNPALGKALTGAWFEMVALMHANNADSSAALTAMAKASGTDLAGFKGQLSTTALF 281 Query: 241 YQPKAALEFATKKELPAIMGRIAKFSFDHGILGPNVKSADGIGVAFDGNVVIGDKKNVKL 300 Y PKAAL+F T E+P IM R+A+FSFDHG+LG + KSAD +G+AFD VVIG+K NVKL Sbjct: 282 YTPKAALDFVTSPEMPKIMTRVARFSFDHGLLGQDAKSADVVGMAFDKGVVIGNKSNVKL 341 Query: 301 RFDPAYMKMAADGKL 315 RFDP Y++MAA GKL Sbjct: 342 RFDPTYVEMAAAGKL 356 >ref|YP_003606121.1| ABC transporter periplasmic binding protein, urea carboxylase region [Burkholderia sp. CCGE1002] gb|ADG16610.1| ABC transporter periplasmic binding protein, urea carboxylase region [Burkholderia sp. CCGE1002] Length = 356 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 220/315 (69%), Positives = 265/315 (84%) Query: 1 MPWGEAQAQGILAKWGKKYGITISAVQLNDYVESINQYTAGKFDGCTMTNMDALTIPAAG 60 MPWGEA+ QGI++KW +KYGI + VQLNDYVESINQYTAGKFDGC MTNMDALTIPA G Sbjct: 42 MPWGEAKTQGIVSKWARKYGINVDVVQLNDYVESINQYTAGKFDGCAMTNMDALTIPATG 101 Query: 61 GVDSTALIVGDYSNGNDGIVLKGKNKKLADIKGQSVQLVEFSVSHYLLARALETAGLRER 120 GVDSTALIV DYSNGNDG+++KGK K++AD+KGQ V LV+FSVSHYLLARALE+A + ER Sbjct: 102 GVDSTALIVSDYSNGNDGVLMKGKGKQIADLKGQQVNLVQFSVSHYLLARALESAHMSER 161 Query: 121 DVKVVNTSDADITAAFATPAVTSTVTWNPMLSSIAASPDVSLVYTSKQLPGEIMDLMVVN 180 D+KVVNTSDADI+ AFATP V + VTWNPML+ + + P+VS V+ S ++PGEIMD+MVVN Sbjct: 162 DLKVVNTSDADISGAFATPTVHNAVTWNPMLADLKSQPNVSEVFDSSKIPGEIMDMMVVN 221 Query: 181 TKTLQENPAFGKALTGAWYEMMAIMTAKDERATRALTAMGKASGTDLAGFQSQLAATAMF 240 TKTLQ+NPA GKALTGAW+EM+A+M +T ALTAM KASGTDLA F+ QL+ TA+F Sbjct: 222 TKTLQQNPALGKALTGAWFEMVALMHTNSAASTSALTAMAKASGTDLANFKGQLSTTALF 281 Query: 241 YQPKAALEFATKKELPAIMGRIAKFSFDHGILGPNVKSADGIGVAFDGNVVIGDKKNVKL 300 Y P+AAL+F T ++P IM R+AKFSFDHG+LG + KSAD +G+AFD VV+G+K NVKL Sbjct: 282 YSPQAALDFVTSADMPKIMTRVAKFSFDHGLLGQDAKSADAVGMAFDKGVVVGNKNNVKL 341 Query: 301 RFDPAYMKMAADGKL 315 RFDP Y+ MAA GKL Sbjct: 342 RFDPTYVAMAAAGKL 356 >ref|YP_004230967.1| ABC transporter periplasmic-binding protein, urea carboxylase region [Burkholderia sp. CCGE1001] gb|ADX57907.1| ABC transporter periplasmic binding protein, urea carboxylase region [Burkholderia sp. CCGE1001] Length = 355 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 220/315 (69%), Positives = 263/315 (83%) Query: 1 MPWGEAQAQGILAKWGKKYGITISAVQLNDYVESINQYTAGKFDGCTMTNMDALTIPAAG 60 MPWGEA+ QGI++KW KKYGI + VQLNDYVESINQYTAGKFDGCTMTNMDALTIPA G Sbjct: 41 MPWGEAKTQGIVSKWAKKYGIHVDVVQLNDYVESINQYTAGKFDGCTMTNMDALTIPATG 100 Query: 61 GVDSTALIVGDYSNGNDGIVLKGKNKKLADIKGQSVQLVEFSVSHYLLARALETAGLRER 120 GVDSTAL+V D+SNGNDG+++KG KK+AD+KGQS+ LVEFSVSHYLLARALETAGL ER Sbjct: 101 GVDSTALLVTDFSNGNDGVLIKGSGKKVADLKGQSINLVEFSVSHYLLARALETAGLSER 160 Query: 121 DVKVVNTSDADITAAFATPAVTSTVTWNPMLSSIAASPDVSLVYTSKQLPGEIMDLMVVN 180 D+KVVNTSDADI+AAFATPAV VTWNPML+ + A P+V+ V+ S ++PGEIMD+MVVN Sbjct: 161 DLKVVNTSDADISAAFATPAVKQAVTWNPMLADLKAKPNVTEVFDSSKIPGEIMDMMVVN 220 Query: 181 TKTLQENPAFGKALTGAWYEMMAIMTAKDERATRALTAMGKASGTDLAGFQSQLAATAMF 240 TKTL +NPA GKALTGAW+EM+A+M A + AL +M KASGTDLAGF+SQL+ T +F Sbjct: 221 TKTLHDNPALGKALTGAWFEMLALMQANSTASAAALNSMAKASGTDLAGFKSQLSTTELF 280 Query: 241 YQPKAALEFATKKELPAIMGRIAKFSFDHGILGPNVKSADGIGVAFDGNVVIGDKKNVKL 300 Y PKAAL FAT LP M R+AKFSFDHG+LG A+ +G+ F VV+G++ N+KL Sbjct: 281 YTPKAALAFATSANLPTTMTRVAKFSFDHGLLGQGAADANAVGMEFGNGVVVGNRNNIKL 340 Query: 301 RFDPAYMKMAADGKL 315 RFDP+Y++MAADGKL Sbjct: 341 RFDPSYVRMAADGKL 355 >ref|YP_001860143.1| ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein [Burkholderia phymatum STM815] gb|ACC73097.1| ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein [Burkholderia phymatum STM815] Length = 372 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 209/315 (66%), Positives = 259/315 (82%) Query: 1 MPWGEAQAQGILAKWGKKYGITISAVQLNDYVESINQYTAGKFDGCTMTNMDALTIPAAG 60 MPWG A+ QGI++KW KKYGI + VQLNDY+ESINQYTAGKFDGC MTNMDALTIPA+G Sbjct: 58 MPWGYAKTQGIMSKWAKKYGINVDVVQLNDYIESINQYTAGKFDGCAMTNMDALTIPASG 117 Query: 61 GVDSTALIVGDYSNGNDGIVLKGKNKKLADIKGQSVQLVEFSVSHYLLARALETAGLRER 120 GVDSTALIV DYSNGNDG+++KG KK+AD+KGQ V LVE SVSHYLLARALE+ G+ ER Sbjct: 118 GVDSTALIVSDYSNGNDGVLVKGSGKKVADLKGQPVNLVELSVSHYLLARALESVGMSER 177 Query: 121 DVKVVNTSDADITAAFATPAVTSTVTWNPMLSSIAASPDVSLVYTSKQLPGEIMDLMVVN 180 D+K VNTSDADI+ AFATPAV + VTWNPML+ + A P+V+ V+ S ++PGEIMD+MVVN Sbjct: 178 DIKTVNTSDADISGAFATPAVHNAVTWNPMLADLKAKPNVTEVFDSSRIPGEIMDMMVVN 237 Query: 181 TKTLQENPAFGKALTGAWYEMMAIMTAKDERATRALTAMGKASGTDLAGFQSQLAATAMF 240 T+TL +NPA GKALTGAW+E+M +M + ALT+M KASGTDLAG++SQL+ TA+F Sbjct: 238 TRTLHDNPALGKALTGAWFEIMQLMHGTSPDSQAALTSMAKASGTDLAGYKSQLSTTALF 297 Query: 241 YQPKAALEFATKKELPAIMGRIAKFSFDHGILGPNVKSADGIGVAFDGNVVIGDKKNVKL 300 Y P+ AL+FAT +P IM R+A+FSFDHG+LG +A +G+AFD NV +G+K N+KL Sbjct: 298 YTPQQALDFATSPNMPKIMTRVAQFSFDHGLLGKGAPNAGAVGMAFDNNVTVGNKNNLKL 357 Query: 301 RFDPAYMKMAADGKL 315 RFDP Y+++AA GKL Sbjct: 358 RFDPTYVRLAAQGKL 372