BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1907.p         (156 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777851.1| hypothetical protein Hsero_4477 [Herbaspiril...   269   1e-70
ref|YP_297683.1| hypothetical protein Reut_B3481 [Ralstonia eutr...   203   5e-51
ref|ZP_08273633.1| hypothetical protein IMCC9480_1676 [Oxalobact...   179   2e-43
ref|ZP_06726381.1| conserved hypothetical protein [Acinetobacter...    84   6e-15
ref|ZP_03822802.1| conserved hypothetical protein [Acinetobacter...    84   7e-15

>ref|YP_003777851.1| hypothetical protein Hsero_4477 [Herbaspirillum seropedicae SmR1]
 gb|ADJ65943.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 306

 Score =  269 bits (687), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 147/156 (94%), Positives = 149/156 (95%)

Query: 1   MTGYYYANGSHANALETKAGLTWGALSFNAQTLLNDVVWGNKGDTYWTLVYTKPLPYDIT 60
           MTGYYY NGSHANALETKAGLTWGALS NAQTLLNDVVWGNKGDTYWTL YTKPLPYDIT
Sbjct: 151 MTGYYYLNGSHANALETKAGLTWGALSLNAQTLLNDVVWGNKGDTYWTLAYTKPLPYDIT 210

Query: 61  FTGTLGAYTYSREGKYLGTRDTATGASCGAGQAFVVNGCFAGNGPSSGGLRHLTLGLSAP 120
           FTGTLGAYTY REGKYLGTRDTATG +CGAGQAF VNGCFAGNGPSSGGLRHLTLGLSAP
Sbjct: 211 FTGTLGAYTYKREGKYLGTRDTATGTACGAGQAFAVNGCFAGNGPSSGGLRHLTLGLSAP 270

Query: 121 FPDSSITWSLQAILGGYNRFDVKQGNQLVGMLSWGF 156
           FP+S ITWSLQAILGGYNRFDVKQGNQLVGMLSWGF
Sbjct: 271 FPNSPITWSLQAILGGYNRFDVKQGNQLVGMLSWGF 306


>ref|YP_297683.1| hypothetical protein Reut_B3481 [Ralstonia eutropha JMP134]
 gb|AAZ62839.1| hypothetical protein Reut_B3481 [Ralstonia eutropha JMP134]
          Length = 312

 Score =  203 bits (517), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 106/156 (67%), Positives = 122/156 (78%)

Query: 1   MTGYYYANGSHANALETKAGLTWGALSFNAQTLLNDVVWGNKGDTYWTLVYTKPLPYDIT 60
           MT YYY NGSHANALETK GL++G +SFNAQTLLNDVVWGNKGDTYWTLV+T+PLPY +T
Sbjct: 156 MTAYYYINGSHANALETKIGLSYGPVSFNAQTLLNDVVWGNKGDTYWTLVFTQPLPYGMT 215

Query: 61  FTGTLGAYTYSREGKYLGTRDTATGASCGAGQAFVVNGCFAGNGPSSGGLRHLTLGLSAP 120
           FT T GAYTY +EGKYLGT DT +G SCG G AFVVNGC+AGN P  G  RHLTL L+AP
Sbjct: 216 FTATAGAYTYRKEGKYLGTTDTLSGTSCGPGAAFVVNGCYAGNAPVGGAFRHLTLALAAP 275

Query: 121 FPDSSITWSLQAILGGYNRFDVKQGNQLVGMLSWGF 156
            P++     +Q ILGG NRF V Q NQ +  + +GF
Sbjct: 276 IPETPFNVGIQWILGGKNRFGVSQKNQFLATVGYGF 311


>ref|ZP_08273633.1| hypothetical protein IMCC9480_1676 [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF32888.1| hypothetical protein IMCC9480_1676 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 299

 Score =  179 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 95/155 (61%), Positives = 112/155 (72%)

Query: 2   TGYYYANGSHANALETKAGLTWGALSFNAQTLLNDVVWGNKGDTYWTLVYTKPLPYDITF 61
           TGY Y NG +ANALETK  L++G  S  AQTLLNDVVWGNKGDTYWTL Y K LPY IT 
Sbjct: 145 TGYVYFNGKNANALETKLALSYGDFSLAAQTLLNDVVWGNKGDTYWTLNYIKVLPYAITL 204

Query: 62  TGTLGAYTYSREGKYLGTRDTATGASCGAGQAFVVNGCFAGNGPSSGGLRHLTLGLSAPF 121
             +LG Y+Y ++GKYLGT DT +   C AGQ+F VNGCF G  PSSG  RHL +G++ P 
Sbjct: 205 NSSLGYYSYKKQGKYLGTVDTLSNTGCPAGQSFSVNGCFDGGAPSSGAFRHLVVGITQPI 264

Query: 122 PDSSITWSLQAILGGYNRFDVKQGNQLVGMLSWGF 156
             + +TW LQ I+ G NRF VKQ NQL+G LS+GF
Sbjct: 265 AATGVTWGLQGIIAGENRFGVKQKNQLLGSLSYGF 299


>ref|ZP_06726381.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gb|EFF83930.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 267

 Score = 84.3 bits (207), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 61/155 (39%), Positives = 75/155 (48%), Gaps = 17/155 (10%)

Query: 2   TGYYYANGSHANALETKAGLTWGALSFNAQTLLNDVVWGNKGDTYWTLVYTKPLPYDITF 61
           T YYY  G  +   ET  GL++   S  AQTLLN+V +GNKGDTY+   YT  LP   T 
Sbjct: 130 TVYYYYPGWESTGYETIVGLSYKDFSITAQTLLNNVTFGNKGDTYFLASYTPQLPGGFTC 189

Query: 62  TGTLGAYTYSREGKYLGTRDTATGASCGAGQAFVVNGCFAGNGPSSGGLRHLTLGLSAPF 121
              + AY Y  + +YL T     G       AF                RH TLGLS P 
Sbjct: 190 KAQVAAYYYGDDDEYL-TYQAKAGDVTKTDFAF----------------RHATLGLSHPL 232

Query: 122 PDSSITWSLQAILGGYNRFDVKQGNQLVGMLSWGF 156
             +  TWSL  I GGY R +VK  N++V  L + F
Sbjct: 233 GATGATWSLDYIFGGYTRDEVKHKNKVVLGLGYAF 267


>ref|ZP_03822802.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
 gb|EEH69291.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
          Length = 267

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 61/155 (39%), Positives = 75/155 (48%), Gaps = 17/155 (10%)

Query: 2   TGYYYANGSHANALETKAGLTWGALSFNAQTLLNDVVWGNKGDTYWTLVYTKPLPYDITF 61
           T YYY  G  +   ET  GL++   S  AQTLLN+V +GNKGDTY+   YT  LP   T 
Sbjct: 130 TVYYYYPGWESTGYETIVGLSYKDFSITAQTLLNNVTFGNKGDTYFLASYTPQLPGGFTG 189

Query: 62  TGTLGAYTYSREGKYLGTRDTATGASCGAGQAFVVNGCFAGNGPSSGGLRHLTLGLSAPF 121
              + AY Y  + +YL T     G       AF                RH TLGLS P 
Sbjct: 190 KAQVAAYYYGDDDEYL-TYQAKAGDVTKTDFAF----------------RHATLGLSHPL 232

Query: 122 PDSSITWSLQAILGGYNRFDVKQGNQLVGMLSWGF 156
             +  TWSL  I GGY R +VK  N++V  L + F
Sbjct: 233 GATGATWSLDYIFGGYTRDEVKHKNKVVLGLGYAF 267