BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1906.p (233 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBJ38027.1| conserved protein of unknown function [Ralstonia... 297 1e-78 ref|NP_519941.1| hypothetical protein RSc1820 [Ralstonia solanac... 296 2e-78 ref|YP_971797.1| hypothetical protein Aave_3466 [Acidovorax citr... 275 4e-72 ref|YP_350190.1| hypothetical protein Pfl01_4462 [Pseudomonas fl... 267 8e-70 emb|CBA33095.1| Uncharacterized protein aq_928 [Curvibacter puta... 264 7e-69 >emb|CBJ38027.1| conserved protein of unknown function [Ralstonia solanacearum CMR15] Length = 207 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 150/199 (75%), Positives = 174/199 (87%), Gaps = 1/199 (0%) Query: 36 YEPRHGHGLAHDPIPSILGPRPIGWISTLNAEGRPNLAPYSFFNIFNYRPPIVAFASVGK 95 Y + GHGL HDPIP+ILGPRPIGWIST +AEGR NLAPYSFFNIFNY+PP+VAF+SVGK Sbjct: 9 YPIQAGHGLPHDPIPAILGPRPIGWISTRDAEGRLNLAPYSFFNIFNYKPPLVAFSSVGK 68 Query: 96 KDSVRNAEATGEFVYNLATRALAEQVNQSSLEQSE-VNEFELAGLTPVTGLVVAAPRVAE 154 KDSVRNAEATGEFVYNLATR LAEQVNQ+S++ V+EF LAGLTP + VAAPRVAE Sbjct: 69 KDSVRNAEATGEFVYNLATRPLAEQVNQTSIDAPPGVDEFALAGLTPARCIEVAAPRVAE 128 Query: 155 SPVAMECKVTQIQPLTTLEGRTLDTWMVYGEVVAVHIDQSLLVEGVYDTAAAQHILRGGG 214 SPV++ECKVTQ+Q L ++G L+TWMV+GEVVAVHID++LL +G+YDTAAAQ ILR GG Sbjct: 129 SPVSLECKVTQVQQLAGIDGVALNTWMVFGEVVAVHIDRALLRDGIYDTAAAQPILRAGG 188 Query: 215 PADYFEVLPQGRFQMRRPK 233 PADYFEVLPQGRF+M RP+ Sbjct: 189 PADYFEVLPQGRFKMYRPR 207 >ref|NP_519941.1| hypothetical protein RSc1820 [Ralstonia solanacearum GMI1000] emb|CAD15522.1| probable flavoprotein oxygenases [Ralstonia solanacearum GMI1000] Length = 207 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 148/199 (74%), Positives = 174/199 (87%), Gaps = 1/199 (0%) Query: 36 YEPRHGHGLAHDPIPSILGPRPIGWISTLNAEGRPNLAPYSFFNIFNYRPPIVAFASVGK 95 Y + GHGL HDPIP+ILGPRPIGWIST +AEGR NLAPYSFFNIFNY+PP+VAF+SVGK Sbjct: 9 YPIQAGHGLPHDPIPAILGPRPIGWISTRDAEGRLNLAPYSFFNIFNYKPPLVAFSSVGK 68 Query: 96 KDSVRNAEATGEFVYNLATRALAEQVNQSSLEQSE-VNEFELAGLTPVTGLVVAAPRVAE 154 KDSVRNAEATGEFVYNLATR LAEQVNQ+S++ ++EF LAGLTP + VAAPRVA+ Sbjct: 69 KDSVRNAEATGEFVYNLATRPLAEQVNQTSIDAPPGIDEFALAGLTPARCIEVAAPRVAQ 128 Query: 155 SPVAMECKVTQIQPLTTLEGRTLDTWMVYGEVVAVHIDQSLLVEGVYDTAAAQHILRGGG 214 SPV++ECKVTQ+Q L ++G L+TWMV+GEVVAVHID++LL +G+YDTAAAQ ILR GG Sbjct: 129 SPVSLECKVTQVQQLAGIDGVALNTWMVFGEVVAVHIDRALLRDGIYDTAAAQPILRAGG 188 Query: 215 PADYFEVLPQGRFQMRRPK 233 PADYFEVLPQGRF+M RP+ Sbjct: 189 PADYFEVLPQGRFRMYRPR 207 >ref|YP_971797.1| hypothetical protein Aave_3466 [Acidovorax citrulli AAC00-1] gb|ABM34023.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1] Length = 209 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 141/200 (70%), Positives = 160/200 (80%) Query: 34 HRYEPRHGHGLAHDPIPSILGPRPIGWISTLNAEGRPNLAPYSFFNIFNYRPPIVAFASV 93 H Y GHGLAHDPIP+ILGPRPIGWIST +A GR NLAPYSFFNIFNYRPPIVAF+SV Sbjct: 10 HTYRLSEGHGLAHDPIPAILGPRPIGWISTRSAGGRANLAPYSFFNIFNYRPPIVAFSSV 69 Query: 94 GKKDSVRNAEATGEFVYNLATRALAEQVNQSSLEQSEVNEFELAGLTPVTGLVVAAPRVA 153 G KD+VRNAE TGEFV NLATR LAEQVN SS E +EF L GLTP L VAAP VA Sbjct: 70 GHKDTVRNAEETGEFVCNLATRPLAEQVNLSSTELPGADEFALTGLTPAPCLEVAAPHVA 129 Query: 154 ESPVAMECKVTQIQPLTTLEGRTLDTWMVYGEVVAVHIDQSLLVEGVYDTAAAQHILRGG 213 ESPVA+EC+VTQ+Q L L+G L TWMV+G+VVAV ID++LL G+YDTAAAQ ILR G Sbjct: 130 ESPVALECRVTQVQRLAGLDGEPLGTWMVFGQVVAVQIDRALLHGGIYDTAAAQPILRAG 189 Query: 214 GPADYFEVLPQGRFQMRRPK 233 GP DYF++LP+G +M RP+ Sbjct: 190 GPQDYFQILPEGLLRMARPR 209 >ref|YP_350190.1| hypothetical protein Pfl01_4462 [Pseudomonas fluorescens Pf0-1] gb|ABA76199.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 209 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 134/200 (67%), Positives = 161/200 (80%), Gaps = 1/200 (0%) Query: 34 HRYEPRHGHGLAHDPIPSILGPRPIGWISTLNAEGRPNLAPYSFFNIFNYRPPIVAFASV 93 H YEP +GHGL HDP +I+GPRPIGWIS+ +AEGR NLAPYSFFN FNY PPI+ F+SV Sbjct: 6 HFYEPANGHGLPHDPFNAIVGPRPIGWISSQDAEGRLNLAPYSFFNAFNYIPPIIGFSSV 65 Query: 94 GKKDSVRNAEATGEFVYNLATRALAEQVNQS-SLEQSEVNEFELAGLTPVTGLVVAAPRV 152 G+KDS+ N E TGEFV+NLATR LAEQ+NQS ++ EVNEFELAGLTPV V+A PRV Sbjct: 66 GRKDSLNNIEQTGEFVWNLATRPLAEQMNQSCAMVGPEVNEFELAGLTPVASKVIAVPRV 125 Query: 153 AESPVAMECKVTQIQPLTTLEGRTLDTWMVYGEVVAVHIDQSLLVEGVYDTAAAQHILRG 212 AESPV+ ECKVTQI L +G T+ +W+V GEVVAVHI + LL +G+YDTAAA+ ILRG Sbjct: 126 AESPVSFECKVTQIIQLQRADGETVPSWLVLGEVVAVHIAKWLLKDGIYDTAAAEPILRG 185 Query: 213 GGPADYFEVLPQGRFQMRRP 232 GGPADYF++ P+ F+M RP Sbjct: 186 GGPADYFQLGPEALFKMWRP 205 >emb|CBA33095.1| Uncharacterized protein aq_928 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 206 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 134/206 (65%), Positives = 159/206 (77%), Gaps = 1/206 (0%) Query: 29 MSPLFHRYEPRHGHGLAHDPIPSILGPRPIGWISTLNAEGRPNLAPYSFFNIFNYRPPIV 88 MSP H YEPR GHGLAHDP +I+GPRPIGWIST NA+G NLAPYSFFN FNY PPIV Sbjct: 1 MSPTQHFYEPRLGHGLAHDPFNAIVGPRPIGWISTRNAQGALNLAPYSFFNAFNYVPPIV 60 Query: 89 AFASVGKKDSVRNAEATGEFVYNLATRALAEQVNQS-SLEQSEVNEFELAGLTPVTGLVV 147 F+S+G KD+VRN EATGEFV+NL TR LAE +N++ + EV+EF LAGLTPV +V Sbjct: 61 GFSSIGCKDTVRNVEATGEFVWNLVTRPLAEAMNETCAAVGPEVDEFALAGLTPVASRLV 120 Query: 148 AAPRVAESPVAMECKVTQIQPLTTLEGRTLDTWMVYGEVVAVHIDQSLLVEGVYDTAAAQ 207 A PRV ESPV+ EC+ TQI L T G T+ +W+V GEVV VHID SLLV+GVYDTAAA Sbjct: 121 APPRVLESPVSFECRCTQIVQLQTAAGSTVPSWLVLGEVVGVHIDTSLLVDGVYDTAAAS 180 Query: 208 HILRGGGPADYFEVLPQGRFQMRRPK 233 H+LRGGGP DYF + P+ F++ RP+ Sbjct: 181 HVLRGGGPGDYFTIGPEQLFRLFRPQ 206