BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1904.p (260 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004235807.1| Asp/Glu/hydantoin racemase [Acidovorax avena... 429 e-118 emb|CBJ38029.1| putative maleate cis-trans isomerase protein [Ra... 425 e-117 ref|NP_519943.1| maleate cis-trans isomerase [Ralstonia solanace... 422 e-116 ref|YP_001562325.1| Asp/Glu/hydantoin racemase [Delftia acidovor... 422 e-116 ref|YP_004490546.1| Asp/Glu/hydantoin racemase [Delftia sp. Cs1-... 421 e-116 >ref|YP_004235807.1| Asp/Glu/hydantoin racemase [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX47240.1| Asp/Glu/hydantoin racemase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 256 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 227/248 (91%), Positives = 237/248 (95%) Query: 13 RSYRIGQIVPSSNTTMETEIPAILRARELILPERFTFHSSRMRMKHVTKEELAAMDGDSD 72 R++RIGQIVPSSNTTMETEIPAILRARE + PERFTFHSSRMRMKHVT+EELAAMDGDSD Sbjct: 9 RAFRIGQIVPSSNTTMETEIPAILRAREALHPERFTFHSSRMRMKHVTREELAAMDGDSD 68 Query: 73 RCALELSDARVDVLGYACLVAIMSMGRGYHRVSEQRLHQRTVDNGGPAPVVTSAGALVDG 132 RCALELSDARVDVLGYACLVAIMSMGRGYHRVSE RLHQRTVDNGGPAPVVTSAGALVDG Sbjct: 69 RCALELSDARVDVLGYACLVAIMSMGRGYHRVSEARLHQRTVDNGGPAPVVTSAGALVDG 128 Query: 133 LHAIGAKKVSILTPYMKPLTQLVIDYIENEGIEVVDSISLEIPDNLEVGRQDPRAPIEIT 192 LHA+GAKKVSILTPYMKPLTQLVIDYIE+EGIEVVDSISLEIPDNLEVGRQDPRAPIEIT Sbjct: 129 LHAMGAKKVSILTPYMKPLTQLVIDYIESEGIEVVDSISLEIPDNLEVGRQDPRAPIEIT 188 Query: 193 KRLDTRGVDAVVASACVQMPSLASVQAIEDRVGLPVLSSSVATTYMMLKRLELSTAVPGF 252 K+L T GVDAVVASACVQMPSLASVQ IEDRVGLPVLSSS ATT+ MLK+L L TAV GF Sbjct: 189 KKLKTAGVDAVVASACVQMPSLASVQPIEDRVGLPVLSSSAATTWQMLKKLGLPTAVAGF 248 Query: 253 GALLSGRY 260 G+LLSGRY Sbjct: 249 GSLLSGRY 256 >emb|CBJ38029.1| putative maleate cis-trans isomerase protein [Ralstonia solanacearum CMR15] Length = 252 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 227/250 (90%), Positives = 234/250 (93%) Query: 11 SARSYRIGQIVPSSNTTMETEIPAILRARELILPERFTFHSSRMRMKHVTKEELAAMDGD 70 +AR+YRIGQIVPSSNTTMETEIPAILRAREL PERFTFHSSRMRMKHVTKEELAAMD D Sbjct: 3 TARAYRIGQIVPSSNTTMETEIPAILRARELTQPERFTFHSSRMRMKHVTKEELAAMDAD 62 Query: 71 SDRCALELSDARVDVLGYACLVAIMSMGRGYHRVSEQRLHQRTVDNGGPAPVVTSAGALV 130 SDRCALELSDARVDVLGYACLVAIMSMG GYHRVSE RLHQRT DNGGPAPVVTSAGALV Sbjct: 63 SDRCALELSDARVDVLGYACLVAIMSMGLGYHRVSEARLHQRTQDNGGPAPVVTSAGALV 122 Query: 131 DGLHAIGAKKVSILTPYMKPLTQLVIDYIENEGIEVVDSISLEIPDNLEVGRQDPRAPIE 190 DGL AIGA+KVS+L PYMKPLTQLVIDYIENEGIEVVDSISLEIPDNLEVGRQDPRAPIE Sbjct: 123 DGLKAIGARKVSLLAPYMKPLTQLVIDYIENEGIEVVDSISLEIPDNLEVGRQDPRAPIE 182 Query: 191 ITKRLDTRGVDAVVASACVQMPSLASVQAIEDRVGLPVLSSSVATTYMMLKRLELSTAVP 250 ITKRL T GVDA+VASACVQMPSL SVQAIEDR GLPVLSSSVATTY+MLKRL L T VP Sbjct: 183 ITKRLKTTGVDAIVASACVQMPSLPSVQAIEDRTGLPVLSSSVATTYLMLKRLGLDTKVP 242 Query: 251 GFGALLSGRY 260 GFG+LLSG Y Sbjct: 243 GFGSLLSGAY 252 >ref|NP_519943.1| maleate cis-trans isomerase [Ralstonia solanacearum GMI1000] emb|CAD15524.1| probable maleate cis-trans isomerase protein [Ralstonia solanacearum GMI1000] Length = 252 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 225/250 (90%), Positives = 234/250 (93%) Query: 11 SARSYRIGQIVPSSNTTMETEIPAILRARELILPERFTFHSSRMRMKHVTKEELAAMDGD 70 +AR+YRIGQIVPSSNTTMETEIPAILRAREL PERFTFHSSRMRMKHVTKEELAAMD D Sbjct: 3 TARAYRIGQIVPSSNTTMETEIPAILRARELTQPERFTFHSSRMRMKHVTKEELAAMDAD 62 Query: 71 SDRCALELSDARVDVLGYACLVAIMSMGRGYHRVSEQRLHQRTVDNGGPAPVVTSAGALV 130 SDRCALELSDARVDVLGYACLVAIMSMG GYHRVS+ RLHQRT +NGGPAPVVTSAGALV Sbjct: 63 SDRCALELSDARVDVLGYACLVAIMSMGLGYHRVSQARLHQRTQENGGPAPVVTSAGALV 122 Query: 131 DGLHAIGAKKVSILTPYMKPLTQLVIDYIENEGIEVVDSISLEIPDNLEVGRQDPRAPIE 190 DGL AIGA+KVS+L PYMKPLTQLVIDYIENEGIEVVDSISLEIPDNLEVGRQDPRAPIE Sbjct: 123 DGLKAIGARKVSLLAPYMKPLTQLVIDYIENEGIEVVDSISLEIPDNLEVGRQDPRAPIE 182 Query: 191 ITKRLDTRGVDAVVASACVQMPSLASVQAIEDRVGLPVLSSSVATTYMMLKRLELSTAVP 250 ITKRL T GVDA+VASACVQMPSL SVQAIEDR GLPVLSSSVATTY+MLKRL L T VP Sbjct: 183 ITKRLKTTGVDAIVASACVQMPSLPSVQAIEDRTGLPVLSSSVATTYLMLKRLGLDTKVP 242 Query: 251 GFGALLSGRY 260 GFG+LLSG Y Sbjct: 243 GFGSLLSGAY 252 >ref|YP_001562325.1| Asp/Glu/hydantoin racemase [Delftia acidovorans SPH-1] gb|ABX33940.1| Asp/Glu/hydantoin racemase [Delftia acidovorans SPH-1] Length = 252 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 223/246 (90%), Positives = 233/246 (94%) Query: 15 YRIGQIVPSSNTTMETEIPAILRARELILPERFTFHSSRMRMKHVTKEELAAMDGDSDRC 74 +RIGQIVPSSNTTMETEIPAILRARE + PERFTFHSSRMRMKHVTKEELAAMDGDSDRC Sbjct: 7 FRIGQIVPSSNTTMETEIPAILRAREALAPERFTFHSSRMRMKHVTKEELAAMDGDSDRC 66 Query: 75 ALELSDARVDVLGYACLVAIMSMGRGYHRVSEQRLHQRTVDNGGPAPVVTSAGALVDGLH 134 ALELSDARVDVLGYACLVAIMSMGRGYHRVSE RLHQRTVDNGGPAPVVTSAGALVDGLH Sbjct: 67 ALELSDARVDVLGYACLVAIMSMGRGYHRVSEARLHQRTVDNGGPAPVVTSAGALVDGLH 126 Query: 135 AIGAKKVSILTPYMKPLTQLVIDYIENEGIEVVDSISLEIPDNLEVGRQDPRAPIEITKR 194 AIGAKKV++L PYMKPLTQLVIDYIENEGIEVVDSISLEI DNL+VG QD RAPIEIT+R Sbjct: 127 AIGAKKVALLAPYMKPLTQLVIDYIENEGIEVVDSISLEIADNLQVGAQDARAPIEITRR 186 Query: 195 LDTRGVDAVVASACVQMPSLASVQAIEDRVGLPVLSSSVATTYMMLKRLELSTAVPGFGA 254 L+T DAV+ASACVQMPSLASVQ IEDRVGLPVLSSSVATT+MMLKRL L TAVPGFGA Sbjct: 187 LNTANADAVIASACVQMPSLASVQPIEDRVGLPVLSSSVATTFMMLKRLGLPTAVPGFGA 246 Query: 255 LLSGRY 260 LLSG+Y Sbjct: 247 LLSGKY 252 >ref|YP_004490546.1| Asp/Glu/hydantoin racemase [Delftia sp. Cs1-4] gb|AEF92191.1| Asp/Glu/hydantoin racemase [Delftia sp. Cs1-4] Length = 252 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 222/246 (90%), Positives = 232/246 (94%) Query: 15 YRIGQIVPSSNTTMETEIPAILRARELILPERFTFHSSRMRMKHVTKEELAAMDGDSDRC 74 +RIGQIVPSSNTTMETEIPAILRARE + PERFTFHSSRMRMKHVTKEELAAMDGDSDRC Sbjct: 7 FRIGQIVPSSNTTMETEIPAILRAREALAPERFTFHSSRMRMKHVTKEELAAMDGDSDRC 66 Query: 75 ALELSDARVDVLGYACLVAIMSMGRGYHRVSEQRLHQRTVDNGGPAPVVTSAGALVDGLH 134 ALELSDARVDVLGYACLVAIMSMGRGYHRVSE RLHQRTVDNGGPAPVVTSAGALVDGLH Sbjct: 67 ALELSDARVDVLGYACLVAIMSMGRGYHRVSEARLHQRTVDNGGPAPVVTSAGALVDGLH 126 Query: 135 AIGAKKVSILTPYMKPLTQLVIDYIENEGIEVVDSISLEIPDNLEVGRQDPRAPIEITKR 194 AIGAKKV++L PYMKPLTQLVIDYIENEGIEVVDSISLEI DNL+VG QD RAPIEIT+R Sbjct: 127 AIGAKKVALLAPYMKPLTQLVIDYIENEGIEVVDSISLEIADNLQVGAQDARAPIEITRR 186 Query: 195 LDTRGVDAVVASACVQMPSLASVQAIEDRVGLPVLSSSVATTYMMLKRLELSTAVPGFGA 254 L+T DAV+ASACVQMPSLASVQ IED VGLPVLSSSVATT+MMLKRL L TAVPGFGA Sbjct: 187 LNTANADAVIASACVQMPSLASVQPIEDHVGLPVLSSSVATTFMMLKRLGLPTAVPGFGA 246 Query: 255 LLSGRY 260 LLSG+Y Sbjct: 247 LLSGKY 252