BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1902.p (311 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002942578.1| 5-carboxymethyl-2-hydroxymuconate delta-isom... 496 e-138 ref|YP_004235809.1| Ureidoglycolate lyase [Acidovorax avenae sub... 492 e-137 ref|YP_998936.1| 5-carboxymethyl-2-hydroxymuconate delta-isomera... 481 e-134 ref|NP_519945.1| hypothetical protein RSc1824 [Ralstonia solanac... 480 e-133 emb|CBJ38031.1| putative 5-carboxymethyl-2-hydroxymuconate Delta... 478 e-133 >ref|YP_002942578.1| 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Variovorax paradoxus S110] gb|ACS17312.1| 5-carboxymethyl-2-hydroxymuconate Delta-isomerase [Variovorax paradoxus S110] Length = 313 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 251/313 (80%), Positives = 282/313 (90%), Gaps = 2/313 (0%) Query: 1 MKLVTYRANVSAAARLGAIVDDLVVDLQQLGLYAGEALPDNMLDFIDLGPCAITSTTALL 60 M+LVTYRA+V+A ARLGAIV+DLVVDLQ+LG +AG+ +PD+ML FI+LGP A+ +TTALL Sbjct: 1 MRLVTYRAHVAAVARLGAIVEDLVVDLQRLGAHAGQPVPDDMLAFIELGPHAVVTTTALL 60 Query: 61 ERHRGQWPVGVARPLVNVRLLAPIPRPRKNIFGIGLNYVEHVEESSRTLDTSKELPKQPV 120 ++H GQWP+GV PL NV+LLAPIPRPRKNIFGIGLNYVEHV ESSRTLDTSKELPKQPV Sbjct: 61 KQHAGQWPLGVTVPLANVKLLAPIPRPRKNIFGIGLNYVEHVAESSRTLDTSKELPKQPV 120 Query: 121 IFSKPPTTVIGQGDAIEHNQAITRQMDWEVELAVIIGKQAKGVSKNDALDYVFGYSVMND 180 IFSKPPTTVIG GDAIEHN AIT+QMDWEVELAVI+G++AKGV K AL++VFGY+V+ND Sbjct: 121 IFSKPPTTVIGPGDAIEHNAAITQQMDWEVELAVIVGRRAKGVDKASALEHVFGYTVLND 180 Query: 181 ISARDNRRAGQWIYSKGQDTYAPFGPMIVTADEIPDPHNLDLSLTVNGVTKQSSNTRHML 240 ISARDNRRAGQWIYSKGQDTYAP GP+IVTADEI DPH L+LSL VNGV KQ SNTRH+L Sbjct: 181 ISARDNRRAGQWIYSKGQDTYAPLGPVIVTADEIADPHALNLSLKVNGVEKQKSNTRHLL 240 Query: 241 FKVDTLIADISAGITLEPGDIIATGTPAGVGAGRSPQEWMWPGDVVVATVEKIGSLRNPI 300 F ++ LIADISAGITLEPGDIIATGTP GVGAGRSPQEWMWPGDVV ATVE IG+LRNPI Sbjct: 241 FNINHLIADISAGITLEPGDIIATGTPEGVGAGRSPQEWMWPGDVVEATVEGIGTLRNPI 300 Query: 301 VAVGELP--PGKA 311 VAVG+ P P KA Sbjct: 301 VAVGDEPRAPRKA 313 >ref|YP_004235809.1| Ureidoglycolate lyase [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX47242.1| Ureidoglycolate lyase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 312 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 250/307 (81%), Positives = 275/307 (89%) Query: 1 MKLVTYRANVSAAARLGAIVDDLVVDLQQLGLYAGEALPDNMLDFIDLGPCAITSTTALL 60 MKLVTYRA+V+AAARLGA+VD LVVDLQ+LG + G LP +MLDFIDLGP A+ +TT LL Sbjct: 1 MKLVTYRAHVAAAARLGALVDGLVVDLQRLGEHTGHDLPHDMLDFIDLGPSAVAATTELL 60 Query: 61 ERHRGQWPVGVARPLVNVRLLAPIPRPRKNIFGIGLNYVEHVEESSRTLDTSKELPKQPV 120 +G+WP+GV PL NV+LLAPIPRPRKNIFGIGLNYVEHV ESSR LDTSK+LPKQPV Sbjct: 61 ADQQGRWPLGVTVPLANVKLLAPIPRPRKNIFGIGLNYVEHVAESSRALDTSKDLPKQPV 120 Query: 121 IFSKPPTTVIGQGDAIEHNQAITRQMDWEVELAVIIGKQAKGVSKNDALDYVFGYSVMND 180 IFSKPPTTVIG GDAIEHN AITRQ+DWEVELAVIIG +AK V + AL+YVFGYS+M D Sbjct: 121 IFSKPPTTVIGPGDAIEHNAAITRQLDWEVELAVIIGTRAKRVDEASALNYVFGYSLMID 180 Query: 181 ISARDNRRAGQWIYSKGQDTYAPFGPMIVTADEIPDPHNLDLSLTVNGVTKQSSNTRHML 240 +SARDNRRAGQWIYSKGQDTYAPFGP+IVTADEIPDP LDLSL VNGVTKQSSNTRHML Sbjct: 181 MSARDNRRAGQWIYSKGQDTYAPFGPVIVTADEIPDPQVLDLSLQVNGVTKQSSNTRHML 240 Query: 241 FKVDTLIADISAGITLEPGDIIATGTPAGVGAGRSPQEWMWPGDVVVATVEKIGSLRNPI 300 FKV+TLIADISAGITLEPGDIIATGTP GVGAGRSPQEW+WPGDV+ ATVEKIGSLR+P+ Sbjct: 241 FKVNTLIADISAGITLEPGDIIATGTPEGVGAGRSPQEWVWPGDVIDATVEKIGSLRHPV 300 Query: 301 VAVGELP 307 VAVG P Sbjct: 301 VAVGNDP 307 >ref|YP_998936.1| 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Verminephrobacter eiseniae EF01-2] gb|ABM59918.1| 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Verminephrobacter eiseniae EF01-2] Length = 313 Score = 481 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 244/307 (79%), Positives = 272/307 (88%) Query: 1 MKLVTYRANVSAAARLGAIVDDLVVDLQQLGLYAGEALPDNMLDFIDLGPCAITSTTALL 60 M+LVTYR VSAAARLGA+VDD VVDL +LG +AG+ALP +ML FIDLGP AI S+T LL Sbjct: 1 MRLVTYRPEVSAAARLGALVDDHVVDLARLGAHAGQALPADMLAFIDLGPQAIQSSTELL 60 Query: 61 ERHRGQWPVGVARPLVNVRLLAPIPRPRKNIFGIGLNYVEHVEESSRTLDTSKELPKQPV 120 ++GQWPVG A P NV+LLAPIPRPRKNIFGIGLNYVEHV ESSRTLDT+K+LPKQPV Sbjct: 61 SSYKGQWPVGTALPATNVKLLAPIPRPRKNIFGIGLNYVEHVAESSRTLDTAKDLPKQPV 120 Query: 121 IFSKPPTTVIGQGDAIEHNQAITRQMDWEVELAVIIGKQAKGVSKNDALDYVFGYSVMND 180 IFSKPPTTV+G GDA+EHN+AIT+Q+DWEVELA IIG +A VS+ +AL +VFGYSV+ D Sbjct: 121 IFSKPPTTVVGPGDAVEHNKAITQQLDWEVELAAIIGTRATRVSEAEALKHVFGYSVLID 180 Query: 181 ISARDNRRAGQWIYSKGQDTYAPFGPMIVTADEIPDPHNLDLSLTVNGVTKQSSNTRHML 240 ISARD RRAGQWIYSKGQDTYAPFGP+IVTADEIPDP LDLSL VNGVTKQSSNTRHML Sbjct: 181 ISARDCRRAGQWIYSKGQDTYAPFGPVIVTADEIPDPQVLDLSLKVNGVTKQSSNTRHML 240 Query: 241 FKVDTLIADISAGITLEPGDIIATGTPAGVGAGRSPQEWMWPGDVVVATVEKIGSLRNPI 300 FKV+TLIADISAGITLEPGDIIATGTP GVGAGR PQEW+WPGDV+ A VE+IGSLRNP+ Sbjct: 241 FKVNTLIADISAGITLEPGDIIATGTPEGVGAGREPQEWLWPGDVIDAYVERIGSLRNPV 300 Query: 301 VAVGELP 307 VAVG P Sbjct: 301 VAVGAEP 307 >ref|NP_519945.1| hypothetical protein RSc1824 [Ralstonia solanacearum GMI1000] emb|CAD15526.1| putative hypothetical protein [Ralstonia solanacearum GMI1000] Length = 319 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 240/305 (78%), Positives = 272/305 (89%) Query: 1 MKLVTYRANVSAAARLGAIVDDLVVDLQQLGLYAGEALPDNMLDFIDLGPCAITSTTALL 60 M+LVT+RA+V+AAARLGAIVD+LVVDL++ G + G LP +ML FIDLGP A+ +TTALL Sbjct: 1 MRLVTFRAHVNAAARLGAIVDNLVVDLERFGEHVGCDLPADMLAFIDLGPHAVAATTALL 60 Query: 61 ERHRGQWPVGVARPLVNVRLLAPIPRPRKNIFGIGLNYVEHVEESSRTLDTSKELPKQPV 120 + +R WP+G A PL NV+LLAPIPRPRKNIFGIGLNYVEHV ESSRTLDT+KELPKQPV Sbjct: 61 DEYRDNWPLGTAVPLANVKLLAPIPRPRKNIFGIGLNYVEHVAESSRTLDTAKELPKQPV 120 Query: 121 IFSKPPTTVIGQGDAIEHNQAITRQMDWEVELAVIIGKQAKGVSKNDALDYVFGYSVMND 180 IFSKPPTTVIG GDAIEHN AITRQ+DWEVELAVIIG +AK V + DAL +VFGYS++ D Sbjct: 121 IFSKPPTTVIGPGDAIEHNAAITRQLDWEVELAVIIGTRAKRVGEADALAHVFGYSLLID 180 Query: 181 ISARDNRRAGQWIYSKGQDTYAPFGPMIVTADEIPDPHNLDLSLTVNGVTKQSSNTRHML 240 +SARD RRAGQWIYSKGQDTYAPFGP+IVTADEIPDPHNLDLSL VNGVTKQ SNTRHML Sbjct: 181 MSARDCRRAGQWIYSKGQDTYAPFGPVIVTADEIPDPHNLDLSLKVNGVTKQDSNTRHML 240 Query: 241 FKVDTLIADISAGITLEPGDIIATGTPAGVGAGRSPQEWMWPGDVVVATVEKIGSLRNPI 300 FKV LIADISAGITLEPGDIIATGTP GVGAGR PQEW+WPGD++ A +EKIG+LR+P+ Sbjct: 241 FKVPALIADISAGITLEPGDIIATGTPEGVGAGRDPQEWVWPGDIIEAQLEKIGALRHPV 300 Query: 301 VAVGE 305 VAVG+ Sbjct: 301 VAVGD 305 >emb|CBJ38031.1| putative 5-carboxymethyl-2-hydroxymuconate Delta-isomerase [Ralstonia solanacearum CMR15] Length = 319 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 239/305 (78%), Positives = 272/305 (89%) Query: 1 MKLVTYRANVSAAARLGAIVDDLVVDLQQLGLYAGEALPDNMLDFIDLGPCAITSTTALL 60 M+LVT+RA+V+AAARLGAIVD+LVVDL++ G + G LP +ML FIDLGP A+ +TTALL Sbjct: 1 MRLVTFRAHVNAAARLGAIVDNLVVDLERFGEHVGCDLPADMLAFIDLGPHAVAATTALL 60 Query: 61 ERHRGQWPVGVARPLVNVRLLAPIPRPRKNIFGIGLNYVEHVEESSRTLDTSKELPKQPV 120 + + G WP+G A PL NV+LLAPIPRPRKNIFGIGLNYVEHV ESSRTLDT+KELPKQPV Sbjct: 61 DEYCGNWPLGTAVPLANVKLLAPIPRPRKNIFGIGLNYVEHVAESSRTLDTAKELPKQPV 120 Query: 121 IFSKPPTTVIGQGDAIEHNQAITRQMDWEVELAVIIGKQAKGVSKNDALDYVFGYSVMND 180 IFSKPPTTVIG GDAIEHN AIT+Q+DWEVELAVIIG +AK V + DAL +VFGYS++ D Sbjct: 121 IFSKPPTTVIGPGDAIEHNAAITQQLDWEVELAVIIGTRAKRVGEADALAHVFGYSLLID 180 Query: 181 ISARDNRRAGQWIYSKGQDTYAPFGPMIVTADEIPDPHNLDLSLTVNGVTKQSSNTRHML 240 +SARD RRAGQWIYSKGQDTYAPFGP+IVTADEIPDPHNLDLSL VNGVTKQ SNTRHML Sbjct: 181 MSARDCRRAGQWIYSKGQDTYAPFGPVIVTADEIPDPHNLDLSLKVNGVTKQDSNTRHML 240 Query: 241 FKVDTLIADISAGITLEPGDIIATGTPAGVGAGRSPQEWMWPGDVVVATVEKIGSLRNPI 300 FKV LIADISAGITLEPGDIIATGTP GVGAGR PQEW+WPGD++ A +EKIG+LR+P+ Sbjct: 241 FKVPALIADISAGITLEPGDIIATGTPEGVGAGRDPQEWVWPGDIIEAQLEKIGALRHPV 300 Query: 301 VAVGE 305 VAVG+ Sbjct: 301 VAVGD 305