BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1901.p (269 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_519946.1| dioxygenase oxidoreductase [Ralstonia solanacea... 493 e-137 ref|YP_998937.1| cupin 2 domain-containing protein [Verminephrob... 483 e-134 emb|CBJ38032.1| putative gentisate 1,2-dioxygenase [Ralstonia so... 479 e-133 ref|YP_002942579.1| cupin [Variovorax paradoxus S110] >gi|239800... 462 e-128 ref|YP_004235810.1| Cupin 2 barrel domain-containing protein [Ac... 442 e-122 >ref|NP_519946.1| dioxygenase oxidoreductase [Ralstonia solanacearum GMI1000] emb|CAD15527.1| probable dioxygenase oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 379 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 234/268 (87%), Positives = 251/268 (93%) Query: 1 MHPGEVASAHAHSSSALRFIMEGRGAYTIVDGHKMTLEANDFVLTPNGTWHEHGVEADGL 60 MHPGEVA+AHAHSSSALRFIMEGRGAYTIVDGHKMTL+ANDFVLTPNGTWHEHGVEADGL Sbjct: 111 MHPGEVATAHAHSSSALRFIMEGRGAYTIVDGHKMTLDANDFVLTPNGTWHEHGVEADGL 170 Query: 61 PCIWQDGLDIPLVNALEAGFYAVHPDLHQAVTHPVDDAVALWGAPGLRPQDVGWNRPYSP 120 PCIWQDGLDIPLVNALEAGFYAVHPDLHQAV +PV+D+ ALWGAPGLRP D W++PYSP Sbjct: 171 PCIWQDGLDIPLVNALEAGFYAVHPDLHQAVGYPVNDSTALWGAPGLRPHDARWSKPYSP 230 Query: 121 LFKYQWGPTYEALQRYARATEGSPFDGLLMHYTNPVSGGHVMATIGASMQLLRPGFAGRA 180 LFKY WGPTYEALQRYA EGSPFDG LMHY NPV+GGHVM+TIGASMQLLRPGF G+A Sbjct: 231 LFKYAWGPTYEALQRYAYTVEGSPFDGALMHYANPVTGGHVMSTIGASMQLLRPGFVGKA 290 Query: 181 HRHTGSFIYQVAKGHGHSIIDGQRFDWKERDIFCVPSWAWHEHVNGSASEDACLFCFSDL 240 HRHTGSF+YQVAKG G+SII+GQRFDW+ERDIFCVPSWAWHEHVNGSASEDACLFCFSDL Sbjct: 291 HRHTGSFLYQVAKGSGYSIINGQRFDWRERDIFCVPSWAWHEHVNGSASEDACLFCFSDL 350 Query: 241 PVMEKLGLYREEAYAEHQGHQPVITPAA 268 PVMEKLGLYREEA A++ GHQP+ PAA Sbjct: 351 PVMEKLGLYREEALADNDGHQPLPGPAA 378 >ref|YP_998937.1| cupin 2 domain-containing protein [Verminephrobacter eiseniae EF01-2] gb|ABM59919.1| gentisate 1,2-dioxygenase [Verminephrobacter eiseniae EF01-2] Length = 387 Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 226/264 (85%), Positives = 244/264 (92%) Query: 1 MHPGEVASAHAHSSSALRFIMEGRGAYTIVDGHKMTLEANDFVLTPNGTWHEHGVEADGL 60 MHPGE ASAHAHS+SALRFIMEGRGAYTIVDGHKMTL ANDFVLTPNG WHEHGVEADGL Sbjct: 111 MHPGEAASAHAHSTSALRFIMEGRGAYTIVDGHKMTLGANDFVLTPNGCWHEHGVEADGL 170 Query: 61 PCIWQDGLDIPLVNALEAGFYAVHPDLHQAVTHPVDDAVALWGAPGLRPQDVGWNRPYSP 120 CIWQDGLDIPLVNALEAGF+ VHPDLHQAV HPVDD+VALWGAPGLRPQDV WN+PYSP Sbjct: 171 TCIWQDGLDIPLVNALEAGFFVVHPDLHQAVAHPVDDSVALWGAPGLRPQDVKWNKPYSP 230 Query: 121 LFKYQWGPTYEALQRYARATEGSPFDGLLMHYTNPVSGGHVMATIGASMQLLRPGFAGRA 180 LFKYQW PTYEALQR A A+EGSPFDG+LMHYTNP++GGHVMATIGASMQLLRPGF +A Sbjct: 231 LFKYQWEPTYEALQRLAAASEGSPFDGVLMHYTNPLNGGHVMATIGASMQLLRPGFESKA 290 Query: 181 HRHTGSFIYQVAKGHGHSIIDGQRFDWKERDIFCVPSWAWHEHVNGSASEDACLFCFSDL 240 HRHTGSF+YQVAKG G+SII+GQRFDW+ERDIFCVPSWAWHEH N S ++DACLFCFSDL Sbjct: 291 HRHTGSFLYQVAKGRGYSIINGQRFDWQERDIFCVPSWAWHEHANASQTQDACLFCFSDL 350 Query: 241 PVMEKLGLYREEAYAEHQGHQPVI 264 PVMEKL LYREEA A++ GHQ V+ Sbjct: 351 PVMEKLALYREEALADNGGHQKVL 374 >emb|CBJ38032.1| putative gentisate 1,2-dioxygenase [Ralstonia solanacearum CMR15] Length = 379 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 237/268 (88%), Positives = 251/268 (93%) Query: 1 MHPGEVASAHAHSSSALRFIMEGRGAYTIVDGHKMTLEANDFVLTPNGTWHEHGVEADGL 60 MHPGEVASAHAHSSSALRFIMEGRGAYTIVDGHKMTL+ANDFVLTPNGTWHEHGVEADGL Sbjct: 111 MHPGEVASAHAHSSSALRFIMEGRGAYTIVDGHKMTLDANDFVLTPNGTWHEHGVEADGL 170 Query: 61 PCIWQDGLDIPLVNALEAGFYAVHPDLHQAVTHPVDDAVALWGAPGLRPQDVGWNRPYSP 120 PCIWQDGLDIPLVNALEAGFYAVHPDLHQAV +PV+DA ALWGAPGLRP D WN+PYSP Sbjct: 171 PCIWQDGLDIPLVNALEAGFYAVHPDLHQAVGYPVNDATALWGAPGLRPHDARWNKPYSP 230 Query: 121 LFKYQWGPTYEALQRYARATEGSPFDGLLMHYTNPVSGGHVMATIGASMQLLRPGFAGRA 180 LFKY WGPTYEALQRYA EGSPFDG LMHY NPV+GGHVM+TIGASMQLLRPGF G+A Sbjct: 231 LFKYAWGPTYEALQRYAYTVEGSPFDGALMHYANPVTGGHVMSTIGASMQLLRPGFVGKA 290 Query: 181 HRHTGSFIYQVAKGHGHSIIDGQRFDWKERDIFCVPSWAWHEHVNGSASEDACLFCFSDL 240 HRHTGSF+YQVAKG G+SII+GQRFDW+ERDIFCVPSWAWHEHVNGSASEDACLFCFSDL Sbjct: 291 HRHTGSFLYQVAKGSGYSIINGQRFDWRERDIFCVPSWAWHEHVNGSASEDACLFCFSDL 350 Query: 241 PVMEKLGLYREEAYAEHQGHQPVITPAA 268 PVMEKLGLYREEA A++ GHQP+ PAA Sbjct: 351 PVMEKLGLYREEALADNDGHQPLPGPAA 378 >ref|YP_002942579.1| cupin [Variovorax paradoxus S110] gb|ACS17313.1| Cupin 2 conserved barrel domain protein [Variovorax paradoxus S110] Length = 377 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 226/267 (84%), Positives = 246/267 (92%) Query: 1 MHPGEVASAHAHSSSALRFIMEGRGAYTIVDGHKMTLEANDFVLTPNGTWHEHGVEADGL 60 MHPGE ASAHAHS+SA+RFIMEGRGAYT+VDGHKMTLEANDFVLTPNGTWHEHGVEADGL Sbjct: 111 MHPGEAASAHAHSASAMRFIMEGRGAYTVVDGHKMTLEANDFVLTPNGTWHEHGVEADGL 170 Query: 61 PCIWQDGLDIPLVNALEAGFYAVHPDLHQAVTHPVDDAVALWGAPGLRPQDVGWNRPYSP 120 CIWQDGLDIPLVNALEAGFYAVHPDL QAV HPVDD+V WGA GLRP +VGW +PYSP Sbjct: 171 TCIWQDGLDIPLVNALEAGFYAVHPDLRQAVGHPVDDSVHAWGAVGLRPHNVGWTQPYSP 230 Query: 121 LFKYQWGPTYEALQRYARATEGSPFDGLLMHYTNPVSGGHVMATIGASMQLLRPGFAGRA 180 LFKYQWGPTY+ALQRYA + E +PFDG LMHYTNPV+GGHVMATIGASMQLLRPGF G+A Sbjct: 231 LFKYQWGPTYDALQRYAGSREDNPFDGALMHYTNPVTGGHVMATIGASMQLLRPGFVGKA 290 Query: 181 HRHTGSFIYQVAKGHGHSIIDGQRFDWKERDIFCVPSWAWHEHVNGSASEDACLFCFSDL 240 HRHTGSF+YQVAKG GHSII+GQRFDW+ERDIFCVPSWAWHEHVNGS +EDACLFCF+DL Sbjct: 291 HRHTGSFLYQVAKGQGHSIINGQRFDWQERDIFCVPSWAWHEHVNGSQTEDACLFCFNDL 350 Query: 241 PVMEKLGLYREEAYAEHQGHQPVITPA 267 PVMEKL LYRE+A A++ GHQPV+ A Sbjct: 351 PVMEKLALYREDALADNGGHQPVLPTA 377 >ref|YP_004235810.1| Cupin 2 barrel domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX47243.1| Cupin 2 conserved barrel domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 381 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 215/266 (80%), Positives = 239/266 (89%) Query: 1 MHPGEVASAHAHSSSALRFIMEGRGAYTIVDGHKMTLEANDFVLTPNGTWHEHGVEADGL 60 MHPGE ASAHAHS+SALRFIMEG+GAYT+VDGHKMTL ANDFVLTPNGTWHEHGVEA GL Sbjct: 115 MHPGEAASAHAHSASALRFIMEGQGAYTVVDGHKMTLGANDFVLTPNGTWHEHGVEAGGL 174 Query: 61 PCIWQDGLDIPLVNALEAGFYAVHPDLHQAVTHPVDDAVALWGAPGLRPQDVGWNRPYSP 120 PCIWQDGLDIPLVNA+EAGFY VHPDL QAV HPV+D+ LWGAP LRP +GW++PYSP Sbjct: 175 PCIWQDGLDIPLVNAMEAGFYVVHPDLRQAVGHPVNDSTGLWGAPALRPHGLGWSKPYSP 234 Query: 121 LFKYQWGPTYEALQRYARATEGSPFDGLLMHYTNPVSGGHVMATIGASMQLLRPGFAGRA 180 LFKY+W PTYEAL R+A ++G+PFD +LMHYTNPV+GGHVM TIGASMQ LRPGFAG+A Sbjct: 235 LFKYEWEPTYEALVRHASVSDGNPFDDVLMHYTNPVTGGHVMPTIGASMQRLRPGFAGKA 294 Query: 181 HRHTGSFIYQVAKGHGHSIIDGQRFDWKERDIFCVPSWAWHEHVNGSASEDACLFCFSDL 240 HRHTGS++YQVAKG GHSII+GQRFDW+ERDIFCVPSWAWHEH N S +EDACLFCFSDL Sbjct: 295 HRHTGSYLYQVAKGRGHSIINGQRFDWQERDIFCVPSWAWHEHANASQTEDACLFCFSDL 354 Query: 241 PVMEKLGLYREEAYAEHQGHQPVITP 266 PVMEKL LYREEA A++ GHQPV P Sbjct: 355 PVMEKLDLYREEALADNGGHQPVSAP 380