BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1894.p (265 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBJ38040.1| putative cyclase [Ralstonia solanacearum CMR15] 451 e-125 ref|NP_519956.1| hypothetical protein RSc1835 [Ralstonia solanac... 446 e-123 ref|YP_004235819.1| cyclase family protein [Acidovorax avenae su... 434 e-120 ref|YP_004682254.1| flavin reductase-like protein FMN-binding pr... 401 e-110 ref|ZP_05974254.1| cyclase family protein [Providencia rustigian... 400 e-109 >emb|CBJ38040.1| putative cyclase [Ralstonia solanacearum CMR15] Length = 263 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 220/260 (84%), Positives = 236/260 (90%) Query: 6 TSTALLPALAAGLADGRLRVVDLTQTLSPSFPALQLPPQFGQVQGFKIERISHYDESGPA 65 T+ +LPALAAGLA G +RVVDLTQTLSPSFP LQLP QFGQVQ FKIERISHYDESGPA Sbjct: 4 TTPTILPALAAGLARGNIRVVDLTQTLSPSFPTLQLPSQFGQVQPFKIERISHYDESGPA 63 Query: 66 WYWNNFSCGEHTGTHFDAPVHWISGRDHPGNSVDTIAPGNFIAPAVVIDASAEVAANEDW 125 WYWNNFSCGEHTGTHFDAP HW++GRD+PGNSVDTIAP NF+APAVVIDASA+V NEDW Sbjct: 64 WYWNNFSCGEHTGTHFDAPAHWVTGRDYPGNSVDTIAPENFVAPAVVIDASAQVRENEDW 123 Query: 126 LLDVPFLEQWEAQHGAIPAGAWVLLRTDWSLRVDDADAFLNLREDGAHTPGPTQAAVEWL 185 LL V FL+ WE +HG IPAGAWVL RTDWSLRV+DA AFLN+REDGAHTPGPTQ AVEWL Sbjct: 124 LLTVDFLQAWEQRHGRIPAGAWVLFRTDWSLRVNDAAAFLNVREDGAHTPGPTQDAVEWL 183 Query: 186 IHQRKVHGFGVETINTDAGQSYAWPVPYPCHTLMHGANRYGLQCLRNLDQLPPQGAMLFS 245 I +R VHGFGVETINTDAGQSYAWP+ YPCHTLMHGANRYGLQCL+NLDQLPPQGA + S Sbjct: 184 IGERNVHGFGVETINTDAGQSYAWPLAYPCHTLMHGANRYGLQCLKNLDQLPPQGAFILS 243 Query: 246 APLKIEGGSGSPLRVLALVE 265 APLKIEGGSGSPLRVLALVE Sbjct: 244 APLKIEGGSGSPLRVLALVE 263 >ref|NP_519956.1| hypothetical protein RSc1835 [Ralstonia solanacearum GMI1000] emb|CAD15537.1| conserved hypothetical protein [Ralstonia solanacearum GMI1000] Length = 263 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 218/260 (83%), Positives = 234/260 (90%) Query: 6 TSTALLPALAAGLADGRLRVVDLTQTLSPSFPALQLPPQFGQVQGFKIERISHYDESGPA 65 T+ +LPALAAGLA G +RVVDLTQTLSPSFP LQLP QFGQVQ FKIERISHYD SGPA Sbjct: 4 TTPTILPALAAGLARGNIRVVDLTQTLSPSFPTLQLPSQFGQVQPFKIERISHYDASGPA 63 Query: 66 WYWNNFSCGEHTGTHFDAPVHWISGRDHPGNSVDTIAPGNFIAPAVVIDASAEVAANEDW 125 WYWNNFSCGEHTGTHFDAP HWI+GRD+PGNSVDTIAP NF+APAVVIDASA+V NEDW Sbjct: 64 WYWNNFSCGEHTGTHFDAPAHWITGRDYPGNSVDTIAPENFVAPAVVIDASAQVRENEDW 123 Query: 126 LLDVPFLEQWEAQHGAIPAGAWVLLRTDWSLRVDDADAFLNLREDGAHTPGPTQAAVEWL 185 LL V FL+ WE +HG IPAGAWVL RTDWSLRV DA AFLN+REDGAHTPGPTQ AVEWL Sbjct: 124 LLTVDFLQAWEQRHGRIPAGAWVLFRTDWSLRVGDAAAFLNIREDGAHTPGPTQEAVEWL 183 Query: 186 IHQRKVHGFGVETINTDAGQSYAWPVPYPCHTLMHGANRYGLQCLRNLDQLPPQGAMLFS 245 I +R VHGFGVETINTDAGQSYAWP+ YPCHTLMHGANRYGLQCL+NLDQLPP+GA + + Sbjct: 184 IGERNVHGFGVETINTDAGQSYAWPLAYPCHTLMHGANRYGLQCLKNLDQLPPRGAFILA 243 Query: 246 APLKIEGGSGSPLRVLALVE 265 APLKIEGGSGSPLRVLALVE Sbjct: 244 APLKIEGGSGSPLRVLALVE 263 >ref|YP_004235819.1| cyclase family protein [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX47252.1| cyclase family protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 278 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 212/243 (87%), Positives = 227/243 (93%) Query: 23 LRVVDLTQTLSPSFPALQLPPQFGQVQGFKIERISHYDESGPAWYWNNFSCGEHTGTHFD 82 +RVVDLTQTLSPSFP LQLPPQFGQV+ F IERISHYDE+GP WYWNNFSCGEHTGTHFD Sbjct: 36 VRVVDLTQTLSPSFPTLQLPPQFGQVKPFTIERISHYDENGPGWYWNNFSCGEHTGTHFD 95 Query: 83 APVHWISGRDHPGNSVDTIAPGNFIAPAVVIDASAEVAANEDWLLDVPFLEQWEAQHGAI 142 AP HWI+GR+HP NSVDTIAP NF+APAVV+DASAEVAA+ DWLL VPFLE WEA+HG I Sbjct: 96 APAHWITGREHPHNSVDTIAPENFVAPAVVVDASAEVAADADWLLTVPFLEAWEARHGRI 155 Query: 143 PAGAWVLLRTDWSLRVDDADAFLNLREDGAHTPGPTQAAVEWLIHQRKVHGFGVETINTD 202 PAGAWVLLRTDWSL+ DA AFLNL+EDGAHTPGPTQ AVEWLIHQR+VHGFGVETINTD Sbjct: 156 PAGAWVLLRTDWSLKAHDAGAFLNLQEDGAHTPGPTQEAVEWLIHQRQVHGFGVETINTD 215 Query: 203 AGQSYAWPVPYPCHTLMHGANRYGLQCLRNLDQLPPQGAMLFSAPLKIEGGSGSPLRVLA 262 AGQSYAWPVPYPCHTLMHGANRYGLQCL+NLDQLPPQGA++ SAPLKIEGGSGSPLRVLA Sbjct: 216 AGQSYAWPVPYPCHTLMHGANRYGLQCLKNLDQLPPQGALILSAPLKIEGGSGSPLRVLA 275 Query: 263 LVE 265 LVE Sbjct: 276 LVE 278 >ref|YP_004682254.1| flavin reductase-like protein FMN-binding protein [Cupriavidus necator N-1] gb|AEI81022.1| cyclase [Cupriavidus necator N-1] Length = 259 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 193/250 (77%), Positives = 219/250 (87%), Gaps = 1/250 (0%) Query: 14 LAAGLADGRLRVVDLTQTLSPSFPALQLPPQFGQVQGFKIERISHYDESGPAWYWNNFSC 73 LAA L+ G+ +++DLTQTLSP FPAL LPP+FGQV FK+ERIS YD+ GP WYWNNFSC Sbjct: 8 LAADLSSGKAKIIDLTQTLSPDFPALVLPPEFGQVWAFKMERISQYDDKGPGWYWNNFSC 67 Query: 74 GEHTGTHFDAPVHWISGRDHPGNSVDTIAPGNFIAPAVVIDASAEVAANEDWLLDVPFLE 133 GEHTGTHFDAPVHWISG+DH N+VDTI P NFIAPAVV+DASAEVA N DW+L V L+ Sbjct: 68 GEHTGTHFDAPVHWISGKDHANNTVDTIDPANFIAPAVVVDASAEVAQNPDWVLTVSHLQ 127 Query: 134 QWEAQHGAIPAGAWVLLRTDWSLRVDDADAFLNLREDGAHTPGPTQAAVEWLIHQRKVHG 193 +WEA+HG IPAGAWVLLRTDWS + D A+ FL LREDGAHTPGP QAAVEWLIH+R VHG Sbjct: 128 RWEAEHGRIPAGAWVLLRTDWSKKTDPAE-FLGLREDGAHTPGPEQAAVEWLIHERNVHG 186 Query: 194 FGVETINTDAGQSYAWPVPYPCHTLMHGANRYGLQCLRNLDQLPPQGAMLFSAPLKIEGG 253 FGVETINTDAGQSYAWP+PYPCHTL HGAN+YGLQCL+NLDQLPP GA++ +APLKI+ G Sbjct: 187 FGVETINTDAGQSYAWPLPYPCHTLTHGANKYGLQCLKNLDQLPPTGALIVAAPLKIQNG 246 Query: 254 SGSPLRVLAL 263 SGSPLRVLA+ Sbjct: 247 SGSPLRVLAI 256 >ref|ZP_05974254.1| cyclase family protein [Providencia rustigianii DSM 4541] gb|EFB70850.1| cyclase family protein [Providencia rustigianii DSM 4541] Length = 260 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 184/254 (72%), Positives = 217/254 (85%) Query: 11 LPALAAGLADGRLRVVDLTQTLSPSFPALQLPPQFGQVQGFKIERISHYDESGPAWYWNN 70 L + A+ L G ++++DLTQTLSPSFPALQLP +FGQV FK+E+IS YDE+GP WYWNN Sbjct: 6 LMSFASELQKGNIQIIDLTQTLSPSFPALQLPAEFGQVWSFKMEQISRYDENGPGWYWNN 65 Query: 71 FSCGEHTGTHFDAPVHWISGRDHPGNSVDTIAPGNFIAPAVVIDASAEVAANEDWLLDVP 130 FSCGEHTGTHFDAP+HW+SG+D P N+VDTI NFIAPAVV+DAS EVA N DW+L V Sbjct: 66 FSCGEHTGTHFDAPIHWVSGKDQPNNTVDTIPLKNFIAPAVVVDASKEVAQNPDWVLTVD 125 Query: 131 FLEQWEAQHGAIPAGAWVLLRTDWSLRVDDADAFLNLREDGAHTPGPTQAAVEWLIHQRK 190 FL++WE +HG IP AWVLLRTDWS + D+ +A++N+REDGAHTPGP+Q AVEWLIHQR Sbjct: 126 FLQKWEEKHGKIPQAAWVLLRTDWSKKSDNPEAYVNMREDGAHTPGPSQEAVEWLIHQRN 185 Query: 191 VHGFGVETINTDAGQSYAWPVPYPCHTLMHGANRYGLQCLRNLDQLPPQGAMLFSAPLKI 250 V GFGVETINTDAGQSY WP+PYPCHTLMHG N+YGLQCL+NLD+LP G ++ +APLKI Sbjct: 186 VKGFGVETINTDAGQSYGWPIPYPCHTLMHGNNKYGLQCLKNLDKLPATGVVIVAAPLKI 245 Query: 251 EGGSGSPLRVLALV 264 EGGSGSPLRVLALV Sbjct: 246 EGGSGSPLRVLALV 259