BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1893.p (182 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBJ38041.1| conserved protein of unknown function [Ralstonia... 237 7e-61 ref|NP_519957.1| hypothetical protein RSc1836 [Ralstonia solanac... 231 4e-59 ref|ZP_05974255.2| flavin reductase family protein [Providencia ... 224 3e-57 ref|ZP_03318367.1| hypothetical protein PROVALCAL_01298 [Provide... 222 1e-56 ref|ZP_06125705.1| flavin reductase family protein [Providencia ... 221 5e-56 >emb|CBJ38041.1| conserved protein of unknown function [Ralstonia solanacearum CMR15] Length = 183 Score = 237 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 117/164 (71%), Positives = 139/164 (84%) Query: 19 WGQTDLAPRTLRNLMGAYPTGVAIVTMRTRDGRDVGLTINSFASLSLDPPLVLWSLVNHS 78 WG DL P+ LRNL G+YPTGVAIVT RT DGR VGLTINSFA+LSL PPLVLWSLV+ S Sbjct: 20 WGNADLEPKALRNLFGSYPTGVAIVTTRTPDGRAVGLTINSFATLSLAPPLVLWSLVDRS 79 Query: 79 PNLDAFRDCAHFAINVLADGQEELARRFATPAIADKFEGVAVAQAPEDLPVIAGALTVLV 138 PNLDAFR+C+HFAIN+LA+G EELA+RFA+ A+ADKF+GVA+ + PE +P I GA+T LV Sbjct: 80 PNLDAFRECSHFAINILANGHEELAKRFASAAVADKFDGVALQETPEGVPAIDGAVTTLV 139 Query: 139 CENDHSRTVGDHLLMVGRIVRTGHQPAAPLVFHAGRFTALQAAA 182 C +DH R VGDHLL+VGR+VRT +QP PLVFHAGRFT+L AA+ Sbjct: 140 CAHDHCRHVGDHLLLVGRVVRTANQPGTPLVFHAGRFTSLHAAS 183 >ref|NP_519957.1| hypothetical protein RSc1836 [Ralstonia solanacearum GMI1000] emb|CAD15538.1| conserved hypothetical protein [Ralstonia solanacearum GMI1000] Length = 183 Score = 231 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 120/179 (67%), Positives = 142/179 (79%), Gaps = 4/179 (2%) Query: 8 LAADPAPVLA----PWGQTDLAPRTLRNLMGAYPTGVAIVTMRTRDGRDVGLTINSFASL 63 LA DP + A WG DL P+ LRNL G+YPTGVAIVT RT DGR VGLTINSFA+L Sbjct: 5 LAPDPTAMSANHHHTWGNVDLEPKALRNLFGSYPTGVAIVTTRTPDGRAVGLTINSFATL 64 Query: 64 SLDPPLVLWSLVNHSPNLDAFRDCAHFAINVLADGQEELARRFATPAIADKFEGVAVAQA 123 SL PPLVLWSLV+ SPNLDAFR C+HFAIN+LA+G E LA+RFA+ A+ DKF+GVA+ + Sbjct: 65 SLAPPLVLWSLVDRSPNLDAFRACSHFAINILANGHEALAKRFASAAVPDKFDGVALQET 124 Query: 124 PEDLPVIAGALTVLVCENDHSRTVGDHLLMVGRIVRTGHQPAAPLVFHAGRFTALQAAA 182 PE +P I GA+T LVC +DH R VGDHLL+VGR+VRT +QP PLVFHAGRFT+L AA+ Sbjct: 125 PEGVPAIDGAVTTLVCAHDHCRHVGDHLLLVGRVVRTANQPGTPLVFHAGRFTSLHAAS 183 >ref|ZP_05974255.2| flavin reductase family protein [Providencia rustigianii DSM 4541] gb|EFB70851.1| flavin reductase family protein [Providencia rustigianii DSM 4541] Length = 176 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 108/175 (61%), Positives = 125/175 (71%) Query: 7 LLAADPAPVLAPWGQTDLAPRTLRNLMGAYPTGVAIVTMRTRDGRDVGLTINSFASLSLD 66 ++A D + WG T+ +TLRNL+G YPTGVAIVT RT DGRDVGLTINSFASLSLD Sbjct: 1 MIAEDTLMCDSEWGHTEFESKTLRNLLGCYPTGVAIVTTRTADGRDVGLTINSFASLSLD 60 Query: 67 PPLVLWSLVNHSPNLDAFRDCAHFAINVLADGQEELARRFATPAIADKFEGVAVAQAPED 126 PPLVLWSLVNHSPNL FRDC HF IN+L +ELA RFA P I +KF+ VA+ PE Sbjct: 61 PPLVLWSLVNHSPNLAVFRDCQHFTINILGKDHQELAMRFANPRIENKFDDVAIHITPEG 120 Query: 127 LPVIAGALTVLVCENDHSRTVGDHLLMVGRIVRTGHQPAAPLVFHAGRFTALQAA 181 +P + GAL LVCEN +GDHLLMVG + R G + PLVFH+G FTAL A Sbjct: 121 IPALHGALVTLVCENHKQDHIGDHLLMVGHVRRIGSETGKPLVFHSGSFTALHEA 175 >ref|ZP_03318367.1| hypothetical protein PROVALCAL_01298 [Providencia alcalifaciens DSM 30120] gb|EEB46574.1| hypothetical protein PROVALCAL_01298 [Providencia alcalifaciens DSM 30120] Length = 176 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 106/175 (60%), Positives = 124/175 (70%) Query: 7 LLAADPAPVLAPWGQTDLAPRTLRNLMGAYPTGVAIVTMRTRDGRDVGLTINSFASLSLD 66 ++A D + WG T+ +TLRNL+G YPTGVA+VT RT DGRDVGLTINSFASLSLD Sbjct: 1 MIAEDTLMCESEWGHTEFESKTLRNLLGCYPTGVAVVTTRTPDGRDVGLTINSFASLSLD 60 Query: 67 PPLVLWSLVNHSPNLDAFRDCAHFAINVLADGQEELARRFATPAIADKFEGVAVAQAPED 126 PPLVLWSLVNHS NL FRDC HF IN+L +ELA RFA P + +KFE VAV PE Sbjct: 61 PPLVLWSLVNHSTNLAVFRDCQHFTINILGKDHQELAMRFANPRVENKFEDVAVHMTPEG 120 Query: 127 LPVIAGALTVLVCENDHSRTVGDHLLMVGRIVRTGHQPAAPLVFHAGRFTALQAA 181 +P + GA+ LVCEN +GDHLLMVG + R G + PLVFH+G FTAL A Sbjct: 121 IPALHGAIVTLVCENHKQDHIGDHLLMVGHVRRIGSETGKPLVFHSGTFTALHEA 175 >ref|ZP_06125705.1| flavin reductase family protein [Providencia rettgeri DSM 1131] gb|EFE53591.1| flavin reductase family protein [Providencia rettgeri DSM 1131] Length = 183 Score = 221 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 108/178 (60%), Positives = 124/178 (69%) Query: 4 TATLLAADPAPVLAPWGQTDLAPRTLRNLMGAYPTGVAIVTMRTRDGRDVGLTINSFASL 63 + +++A D WG T+ + LRNL+G YPTGVAIVT RT DGRDVGLTINSFASL Sbjct: 5 SMSMIAEDTLMCDREWGDTEFESKILRNLLGCYPTGVAIVTTRTADGRDVGLTINSFASL 64 Query: 64 SLDPPLVLWSLVNHSPNLDAFRDCAHFAINVLADGQEELARRFATPAIADKFEGVAVAQA 123 SLDPPLVLWSLVNHSPNL FRDC HF IN+L G +ELA RFA P I +KF VA Sbjct: 65 SLDPPLVLWSLVNHSPNLAVFRDCTHFTINILGHGHQELAMRFANPRIENKFADVATHLT 124 Query: 124 PEDLPVIAGALTVLVCENDHSRTVGDHLLMVGRIVRTGHQPAAPLVFHAGRFTALQAA 181 PE +P + GA+ LVCEN T+GDHLLMVG + R G + PLVFH G FTAL A Sbjct: 125 PEGVPALHGAIATLVCENHKQDTIGDHLLMVGHVRRIGSEAGKPLVFHGGSFTALHEA 182