BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1890.p (303 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBJ38038.1| conserved exported protein of unknown function [... 351 9e-95 gb|EGP44412.1| meta-pathway phenol degradation-like protein [Ach... 348 5e-94 ref|NP_519954.1| signal peptide protein [Ralstonia solanacearum ... 348 9e-94 gb|EFV87507.1| hypothetical protein HMPREF0005_05013 [Achromobac... 347 1e-93 ref|YP_003978465.1| meta-pathway phenol degradation-like protein... 337 2e-90 >emb|CBJ38038.1| conserved exported protein of unknown function [Ralstonia solanacearum CMR15] Length = 303 Score = 351 bits (900), Expect = 9e-95, Method: Composition-based stats. Identities = 175/285 (61%), Positives = 215/285 (75%), Gaps = 1/285 (0%) Query: 19 LGLALACLPAHAIDGSGLPSYPDGLENFGSGALPPPGVYGMVYTGFAQYDHIRGNNGQDI 78 L A + AHA +G GL YPDGLEN+ GALPPPGV+ +VY G A+YD +RGN+GQ + Sbjct: 20 LACAASMTAAHATEGGGLSIYPDGLENYLVGALPPPGVHALVYAGAARYDTLRGNSGQSL 79 Query: 79 GPPDFRVQVGVLAPRVVWVTQQSILGGQLAFHALAPLLDVDVRAGGRNFHSRGLGDITVG 138 DF+V V V+APR++WVT + GGQLAFHA+APLLDVD RA G F S GLGDIT+G Sbjct: 80 -LQDFKVDVNVVAPRLIWVTPAQLFGGQLAFHAIAPLLDVDFRANGARFKSSGLGDITLG 138 Query: 139 PALAYHASPALHYAVGFDITMPSGQYSADNPSSLGKNIWVYQPLVALSYIQREGVNADVK 198 AL YH SPALHY VG D+ P+G Y ++PSSLGKN W QPL A++Y+Q G N D+K Sbjct: 139 TALGYHVSPALHYVVGLDVFAPTGHYDQNDPSSLGKNYWTAQPLAAITYMQPTGFNGDLK 198 Query: 199 LMYDFNGRNGATQTRSGQAIHADYALGWGFGNGLVAGVGGYVYQQVTNDSGPNAAAGKSQ 258 +MYD N RN T TRSGQAIHADY+ GWG GNG V GVGGYVYQQ TND GP AA GK++ Sbjct: 199 VMYDLNFRNNQTDTRSGQAIHADYSAGWGIGNGWVLGVGGYVYQQTTNDQGPAAAQGKAR 258 Query: 259 ALAIGPNLKYDNGKGLVVTAKFQQEYDVRNRPEGKQFYVKAILPF 303 ALA+GP+++Y N +G ++T K+Q+E++VRNRP G QFYVKA +PF Sbjct: 259 ALAVGPSIRYANDRGWLLTVKWQKEFEVRNRPSGSQFYVKASIPF 303 >gb|EGP44412.1| meta-pathway phenol degradation-like protein [Achromobacter xylosoxidans AXX-A] Length = 283 Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 175/283 (61%), Positives = 220/283 (77%) Query: 21 LALACLPAHAIDGSGLPSYPDGLENFGSGALPPPGVYGMVYTGFAQYDHIRGNNGQDIGP 80 +ALA AHA +G GL YPDGLENF SGALPPPGV+ +VY G A+YD +RGN+G+ + Sbjct: 1 MALAGGVAHATEGGGLGIYPDGLENFMSGALPPPGVHMLVYGGGARYDKLRGNDGERLPV 60 Query: 81 PDFRVQVGVLAPRVVWVTQQSILGGQLAFHALAPLLDVDVRAGGRNFHSRGLGDITVGPA 140 PDF+V V VLAPR++WVT Q + GGQLAFHA+APLLDV +AGG+ + S GLGD+T+G A Sbjct: 61 PDFKVDVNVLAPRLIWVTPQQVFGGQLAFHAIAPLLDVTFKAGGQRYRSTGLGDMTLGVA 120 Query: 141 LAYHASPALHYAVGFDITMPSGQYSADNPSSLGKNIWVYQPLVALSYIQREGVNADVKLM 200 L YH S +LHY VG D+ P+G+Y +PSSLGKN W QP+ ALS I +G NAD+KLM Sbjct: 121 LGYHLSESLHYVVGLDMYAPTGEYDRKDPSSLGKNYWTAQPVFALSRISPDGFNADLKLM 180 Query: 201 YDFNGRNGATQTRSGQAIHADYALGWGFGNGLVAGVGGYVYQQVTNDSGPNAAAGKSQAL 260 YDFN RN AT TRSGQAIHADYALGWG G G V GVGG+ +QQVT+D+GPN+AAG+++A Sbjct: 181 YDFNFRNSATDTRSGQAIHADYALGWGVGKGWVLGVGGHAFQQVTDDNGPNSAAGRARAF 240 Query: 261 AIGPNLKYDNGKGLVVTAKFQQEYDVRNRPEGKQFYVKAILPF 303 +GP+++Y N +G + TAK+QQE+ V+NRPEG Q YVK +PF Sbjct: 241 GVGPSVRYMNDRGWLFTAKWQQEFQVKNRPEGAQLYVKLAIPF 283 >ref|NP_519954.1| signal peptide protein [Ralstonia solanacearum GMI1000] emb|CAD15535.1| probable cog4313, involved in meta-pathway of phenol degradation signal peptide protein [Ralstonia solanacearum GMI1000] Length = 297 Score = 348 bits (892), Expect = 9e-94, Method: Composition-based stats. Identities = 175/285 (61%), Positives = 213/285 (74%), Gaps = 1/285 (0%) Query: 19 LGLALACLPAHAIDGSGLPSYPDGLENFGSGALPPPGVYGMVYTGFAQYDHIRGNNGQDI 78 L A + AHA +G GL YPDGLEN+ GALPPPGV+ +VY G A+YD +RGN+GQ + Sbjct: 14 LACAASMTAAHATEGGGLAIYPDGLENYLVGALPPPGVHALVYAGAARYDTLRGNSGQSL 73 Query: 79 GPPDFRVQVGVLAPRVVWVTQQSILGGQLAFHALAPLLDVDVRAGGRNFHSRGLGDITVG 138 DF+V V VLAPR++WVT + GGQLAFHA+APLLDVD RA G F S GLGDIT+G Sbjct: 74 -LQDFKVDVNVLAPRLIWVTPAQVFGGQLAFHAIAPLLDVDFRANGARFKSSGLGDITLG 132 Query: 139 PALAYHASPALHYAVGFDITMPSGQYSADNPSSLGKNIWVYQPLVALSYIQREGVNADVK 198 AL YH SPALHY +G D+ P+G Y PSSLGKN W QPL A++Y+Q G N D+K Sbjct: 133 TALGYHVSPALHYVIGLDVFAPTGHYDPTAPSSLGKNYWTAQPLAAITYMQPTGFNGDLK 192 Query: 199 LMYDFNGRNGATQTRSGQAIHADYALGWGFGNGLVAGVGGYVYQQVTNDSGPNAAAGKSQ 258 +MYD N RN T TRSGQAIHADY+ GWG GNG V GVGGYVYQQ TND GP AA GK++ Sbjct: 193 VMYDLNFRNTRTDTRSGQAIHADYSAGWGIGNGWVLGVGGYVYQQTTNDQGPAAAQGKAR 252 Query: 259 ALAIGPNLKYDNGKGLVVTAKFQQEYDVRNRPEGKQFYVKAILPF 303 ALA+GP+++Y N +G ++T K+Q+E++VRNRP G QFYVKA +PF Sbjct: 253 ALAVGPSIRYANDRGWLLTVKWQKEFEVRNRPSGSQFYVKASIPF 297 >gb|EFV87507.1| hypothetical protein HMPREF0005_05013 [Achromobacter xylosoxidans C54] Length = 297 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 172/276 (62%), Positives = 215/276 (77%) Query: 28 AHAIDGSGLPSYPDGLENFGSGALPPPGVYGMVYTGFAQYDHIRGNNGQDIGPPDFRVQV 87 A A +G GL YPDGLENF SGALPPPGV+ +VY G A+YD +RGN+G+ + PDF+V V Sbjct: 22 AQATEGGGLGIYPDGLENFMSGALPPPGVHMLVYAGGARYDKLRGNDGERLPVPDFKVDV 81 Query: 88 GVLAPRVVWVTQQSILGGQLAFHALAPLLDVDVRAGGRNFHSRGLGDITVGPALAYHASP 147 VLAPR++WVT Q +LGGQLAFHA+APLLDV +AGG+ + S GLGD+T+G AL YH S Sbjct: 82 NVLAPRLIWVTPQQVLGGQLAFHAIAPLLDVTFKAGGQRYRSTGLGDMTLGVALGYHLSE 141 Query: 148 ALHYAVGFDITMPSGQYSADNPSSLGKNIWVYQPLVALSYIQREGVNADVKLMYDFNGRN 207 +LHY VG D+ P+G+Y +PSSLGKN W QP+ ALS I +G NAD+KLMYDFN RN Sbjct: 142 SLHYVVGLDMYAPTGEYDRKDPSSLGKNYWTAQPVFALSRISPDGFNADLKLMYDFNFRN 201 Query: 208 GATQTRSGQAIHADYALGWGFGNGLVAGVGGYVYQQVTNDSGPNAAAGKSQALAIGPNLK 267 AT TRSGQAIHADYA GWG G G V GVGG+ +QQVT+DSGPN+AAG+++A +GP+++ Sbjct: 202 SATDTRSGQAIHADYAFGWGVGKGWVLGVGGHAFQQVTDDSGPNSAAGRARAYGVGPSVR 261 Query: 268 YDNGKGLVVTAKFQQEYDVRNRPEGKQFYVKAILPF 303 Y N +G + TAK+QQE+ V+NRPEG Q YVK +PF Sbjct: 262 YMNDRGWLFTAKWQQEFQVKNRPEGAQLYVKLAIPF 297 >ref|YP_003978465.1| meta-pathway phenol degradation-like protein [Achromobacter xylosoxidans A8] gb|ADP15750.1| meta-pathway phenol degradation-like protein [Achromobacter xylosoxidans A8] Length = 298 Score = 337 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 168/275 (61%), Positives = 212/275 (77%) Query: 29 HAIDGSGLPSYPDGLENFGSGALPPPGVYGMVYTGFAQYDHIRGNNGQDIGPPDFRVQVG 88 A +G GL YPDGLENF SGALPPPGV+ +VY G A+YD +RGN+G+ + P F+V V Sbjct: 24 QATEGGGLGIYPDGLENFMSGALPPPGVHMLVYAGGARYDTLRGNDGERVPVPGFKVDVN 83 Query: 89 VLAPRVVWVTQQSILGGQLAFHALAPLLDVDVRAGGRNFHSRGLGDITVGPALAYHASPA 148 VLAPR++WVTQQ ++GGQLAFHA+APLLDV +A G+ S GLGD+T+G AL YH S + Sbjct: 84 VLAPRLIWVTQQQVMGGQLAFHAIAPLLDVTAKAAGQRNRSTGLGDMTLGVALGYHPSES 143 Query: 149 LHYAVGFDITMPSGQYSADNPSSLGKNIWVYQPLVALSYIQREGVNADVKLMYDFNGRNG 208 LHY VG D+ P+G+Y+ +PSSLGKN W QP+ ALS I +G NAD+K+MYDFN N Sbjct: 144 LHYVVGLDMYAPTGEYNRKDPSSLGKNYWTAQPVFALSRISPDGFNADLKVMYDFNFTNS 203 Query: 209 ATQTRSGQAIHADYALGWGFGNGLVAGVGGYVYQQVTNDSGPNAAAGKSQALAIGPNLKY 268 AT TRSGQA+HADYALGWG G G V GVGGY +QQVT+DSGPN+AAG+++A GP+++Y Sbjct: 204 ATDTRSGQALHADYALGWGVGKGWVLGVGGYAFQQVTDDSGPNSAAGRARAFGFGPSVRY 263 Query: 269 DNGKGLVVTAKFQQEYDVRNRPEGKQFYVKAILPF 303 N KG + TAK+QQ++ V+NRPEG Q YVK +PF Sbjct: 264 MNEKGWLFTAKWQQDFKVKNRPEGAQLYVKLGIPF 298