BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1875.p (234 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_518752.1| hypothetical protein RSc0631 [Ralstonia solanac... 195 4e-48 ref|YP_004087880.1| carboxymuconolactone decarboxylase [Asticcac... 166 3e-39 ref|YP_004183147.1| carboxymuconolactone decarboxylase [Terriglo... 152 4e-35 ref|YP_767945.1| carboxymuconolactone decarboxylase [Rhizobium l... 149 3e-34 ref|ZP_06833938.1| carboxymuconolactone decarboxylase [Gluconace... 145 4e-33 >ref|NP_518752.1| hypothetical protein RSc0631 [Ralstonia solanacearum GMI1000] emb|CAD14161.1| probable transmembrane protein [Ralstonia solanacearum GMI1000] Length = 242 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 111/229 (48%), Positives = 154/229 (67%) Query: 2 TQASATDALFDMLSSVAPALVDLTRKHVVDELWNRPGLAPRERALVTVAVLVARNATLAY 61 + +S+TD LF M+ +V+P LV TR +V+ELW+RPGL PR+RA+VT++VLV+RNA+ AY Sbjct: 4 SASSSTDPLFQMIGAVSPVLVPYTRHRIVEELWHRPGLQPRDRAIVTLSVLVSRNASNAY 63 Query: 62 PHYFNKALDSGVSADALSEVLTHLGPYASLANAFAAIGAARDVLHQRGLQVDLQAAAAAQ 121 HY NKALDSG+ LSE+LTHL YAS A +F A+ + + RG+ VD + Sbjct: 64 DHYLNKALDSGLKPSELSELLTHLAFYASFAYSFGAVAVLKGIFEARGITVDALPEVSPA 123 Query: 122 LLALDDVVPPTLQEAVFGIDEMAASSPALAHFTGSVLQRMIWCRPGLAARERVLVTLAAL 181 LLA ++ +P + F +A +S AL HFT ++L +W RPGLA R+R L T+A+L Sbjct: 124 LLAAEEALPGAAKRTAFLEANVAPASQALLHFTDALLNHEVWLRPGLATRDRALATIASL 183 Query: 182 AALGQTERVPGYLALATHHGLRSEQLGEAMAHVAFYGGWGLAQKAAAAL 230 AA GQ + +P YL A G+ E +GE +AHVAFYGGWG A +AA+A+ Sbjct: 184 AAQGQADVLPTYLERALASGVTKEAIGELLAHVAFYGGWGNAIQAASAV 232 >ref|YP_004087880.1| carboxymuconolactone decarboxylase [Asticcacaulis excentricus CB 48] gb|ADU13729.1| Carboxymuconolactone decarboxylase [Asticcacaulis excentricus CB 48] Length = 243 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 104/225 (46%), Positives = 137/225 (60%) Query: 7 TDALFDMLSSVAPALVDLTRKHVVDELWNRPGLAPRERALVTVAVLVARNATLAYPHYFN 66 T LF+ML AP LV T+ +VDELW+RPGL+ R+RA+ TV L+ARNA AYP+YFN Sbjct: 9 TAPLFNMLRGAAPVLVPFTQDRIVDELWHRPGLSARDRAIATVVTLMARNAQNAYPYYFN 68 Query: 67 KALDSGVSADALSEVLTHLGPYASLANAFAAIGAARDVLHQRGLQVDLQAAAAAQLLALD 126 KALDSGV++ SE++TH YA NAFAA G + + +RG+ V+ L + Sbjct: 69 KALDSGVTSAEFSELVTHTAFYAGWPNAFAAAGVLKGIFDERGVAVEDLPTVEEARLPTE 128 Query: 127 DVVPPTLQEAVFGIDEMAASSPALAHFTGSVLQRMIWCRPGLAARERVLVTLAALAALGQ 186 VP A + +A +S AL HFT +L +W RP L R+R L T+A LAALGQ Sbjct: 129 VAVPDDALRAAYIAAHIAPASEALQHFTNDLLYANLWHRPALEPRDRALATVALLAALGQ 188 Query: 187 TERVPGYLALATHHGLRSEQLGEAMAHVAFYGGWGLAQKAAAALR 231 + P YL A G+ ++GE +AH AFYGGWG A +AA A + Sbjct: 189 SAFFPVYLTRALTQGVTRTEVGEMLAHTAFYGGWGYAIQAAEAAK 233 >ref|YP_004183147.1| carboxymuconolactone decarboxylase [Terriglobus saanensis SP1PR4] gb|ADV83153.1| Carboxymuconolactone decarboxylase [Terriglobus saanensis SP1PR4] Length = 294 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 90/220 (40%), Positives = 129/220 (58%), Gaps = 2/220 (0%) Query: 12 DMLSSVAPALVDLTRKHVVDELWNRPGLAPRERALVTVAVLVARNATLAYPHYFNKALDS 71 D + +V+PAL T ++D +W RP L PR+R++VTVA L+AR + P++F ALD+ Sbjct: 69 DDVWAVSPALAQYTAGPLLDGVWKRPELTPRDRSVVTVAALIARIQLIEMPYHFALALDN 128 Query: 72 GVSADALSEVLTHLGPYASLANAFAAIGAARDVLHQRGLQVDLQAAAAAQLLALDDVVPP 131 GV LSE++THL YA ANA +A+ A+D+ H+RG+ VD A +LL L++ Sbjct: 129 GVKPGELSEIITHLAFYAGWANAMSAVAIAKDIFHRRGIGVDQLPPAKDKLLQLNEEAEK 188 Query: 132 TLQEAVFGIDEMAASSPALAHFTGSVLQRMIWCRPGLAARERVLVTLAALAALGQTERVP 191 Q A + A SP L T +L R +W RP LA R+R LVT++AL A GQT ++ Sbjct: 189 --QRAAQVSNNFGAVSPGLVQKTTDLLFRDLWLRPALAPRDRSLVTVSALIANGQTAQIT 246 Query: 192 GYLALATHHGLRSEQLGEAMAHVAFYGGWGLAQKAAAALR 231 +L A +GL EQ E + +AFY GW A A ++ Sbjct: 247 YHLGRAMDNGLTQEQASEVLTQIAFYAGWPCAFSALPVVK 286 Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 58/95 (61%) Query: 14 LSSVAPALVDLTRKHVVDELWNRPGLAPRERALVTVAVLVARNATLAYPHYFNKALDSGV 73 +V+P LV T + +LW RP LAPR+R+LVTV+ L+A T ++ +A+D+G+ Sbjct: 198 FGAVSPGLVQKTTDLLFRDLWLRPALAPRDRSLVTVSALIANGQTAQITYHLGRAMDNGL 257 Query: 74 SADALSEVLTHLGPYASLANAFAAIGAARDVLHQR 108 + + SEVLT + YA AF+A+ +DV +R Sbjct: 258 TQEQASEVLTQIAFYAGWPCAFSALPVVKDVFEKR 292 >ref|YP_767945.1| carboxymuconolactone decarboxylase [Rhizobium leguminosarum bv. viciae 3841] emb|CAK07845.1| putative carboxymuconolactone decarboxylase [Rhizobium leguminosarum bv. viciae 3841] Length = 275 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 91/224 (40%), Positives = 133/224 (59%), Gaps = 2/224 (0%) Query: 4 ASATDALFDMLSSVAPALVDLTRKHVVDELWNRPGLAPRERALVTVAVLVARNATLAYPH 63 ASA+ + SV+PAL + V+ LW RP L+ R+R++VT+AVL+ARN + H Sbjct: 42 ASASSLSVSDIQSVSPALGRYAEEDVLGNLWQRPQLSRRDRSIVTLAVLIARNQAIDLKH 101 Query: 64 YFNKALDSGVSADALSEVLTHLGPYASLANAFAAIGAARDVLHQRGLQVDLQAAAAAQLL 123 Y + ALD+GVS +SE++THL Y+ +NA +A+ A +DV RG+ D AA+ QLL Sbjct: 102 YVDGALDNGVSPTEVSEIITHLAFYSGWSNAMSAVAATKDVFKDRGITADQLPAASPQLL 161 Query: 124 ALDDVVPPTLQEAVFGIDEMAASSPALAHFTGSVLQRMIWCRPGLAARERVLVTLAALAA 183 L++ Q A + SP L FT L +W RPGLA R+R LVT+++L A Sbjct: 162 PLNE--EAERQRATGVEKNVGPISPGLVQFTTDPLFLDLWQRPGLAPRDRSLVTVSSLIA 219 Query: 184 LGQTERVPGYLALATHHGLRSEQLGEAMAHVAFYGGWGLAQKAA 227 GQ+ ++ +L A +GL +++ GE +AH AFY GW A A+ Sbjct: 220 SGQSAQITYHLNRAMDNGLTADEAGEVVAHTAFYAGWPNAFSAS 263 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 38/93 (40%), Positives = 57/93 (61%) Query: 17 VAPALVDLTRKHVVDELWNRPGLAPRERALVTVAVLVARNATLAYPHYFNKALDSGVSAD 76 ++P LV T + +LW RPGLAPR+R+LVTV+ L+A + ++ N+A+D+G++AD Sbjct: 182 ISPGLVQFTTDPLFLDLWQRPGLAPRDRSLVTVSSLIASGQSAQITYHLNRAMDNGLTAD 241 Query: 77 ALSEVLTHLGPYASLANAFAAIGAARDVLHQRG 109 EV+ H YA NAF+A +VL R Sbjct: 242 EAGEVVAHTAFYAGWPNAFSASPVVGEVLRSRA 274 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 50/94 (53%) Query: 138 FGIDEMAASSPALAHFTGSVLQRMIWCRPGLAARERVLVTLAALAALGQTERVPGYLALA 197 + ++ + SPAL + + +W RP L+ R+R +VTLA L A Q + Y+ A Sbjct: 47 LSVSDIQSVSPALGRYAEEDVLGNLWQRPQLSRRDRSIVTLAVLIARNQAIDLKHYVDGA 106 Query: 198 THHGLRSEQLGEAMAHVAFYGGWGLAQKAAAALR 231 +G+ ++ E + H+AFY GW A A AA + Sbjct: 107 LDNGVSPTEVSEIITHLAFYSGWSNAMSAVAATK 140 >ref|ZP_06833938.1| carboxymuconolactone decarboxylase [Gluconacetobacter hansenii ATCC 23769] gb|EFG84861.1| carboxymuconolactone decarboxylase [Gluconacetobacter hansenii ATCC 23769] Length = 244 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 82/220 (37%), Positives = 124/220 (56%) Query: 11 FDMLSSVAPALVDLTRKHVVDELWNRPGLAPRERALVTVAVLVARNATLAYPHYFNKALD 70 + + VAPAL T ++ +LW R GL+ R+R+LVTV+ LVA T+A+ HYF KALD Sbjct: 9 LEYVRGVAPALAHYTETAIIRDLWARSGLSARDRSLVTVSALVAGERTIAFAHYFTKALD 68 Query: 71 SGVSADALSEVLTHLGPYASLANAFAAIGAARDVLHQRGLQVDLQAAAAAQLLALDDVVP 130 SGV+ LSE++TH+ YA + AF A+ + + + QRG+ D + LL++D+ +P Sbjct: 69 SGVTPGELSELITHVAFYAGWSTAFNAVVSLKGIFAQRGVSADQLPPVSPDLLSVDEALP 128 Query: 131 PTLQEAVFGIDEMAASSPALAHFTGSVLQRMIWCRPGLAARERVLVTLAALAALGQTERV 190 + +P L T +L +W RPGL R+R LVT++A+ GQ E + Sbjct: 129 GDAARVALLQERFGTVAPGLVEITNDLLYGDVWLRPGLTPRDRNLVTVSAMIGSGQNEFL 188 Query: 191 PGYLALATHHGLRSEQLGEAMAHVAFYGGWGLAQKAAAAL 230 YL A G+ ++L E + H++FY GW A +A L Sbjct: 189 AMYLGKAVKMGVTRDELSELVTHLSFYIGWPRAISSARVL 228 Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 36/85 (42%), Positives = 51/85 (60%) Query: 147 SPALAHFTGSVLQRMIWCRPGLAARERVLVTLAALAALGQTERVPGYLALATHHGLRSEQ 206 +PALAH+T + + R +W R GL+AR+R LVT++AL A +T Y A G+ + Sbjct: 16 APALAHYTETAIIRDLWARSGLSARDRSLVTVSALVAGERTIAFAHYFTKALDSGVTPGE 75 Query: 207 LGEAMAHVAFYGGWGLAQKAAAALR 231 L E + HVAFY GW A A +L+ Sbjct: 76 LSELITHVAFYAGWSTAFNAVVSLK 100 Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 35/108 (32%), Positives = 57/108 (52%) Query: 4 ASATDALFDMLSSVAPALVDLTRKHVVDELWNRPGLAPRERALVTVAVLVARNATLAYPH 63 A+ L + +VAP LV++T + ++W RPGL PR+R LVTV+ ++ Sbjct: 131 AARVALLQERFGTVAPGLVEITNDLLYGDVWLRPGLTPRDRNLVTVSAMIGSGQNEFLAM 190 Query: 64 YFNKALDSGVSADALSEVLTHLGPYASLANAFAAIGAARDVLHQRGLQ 111 Y KA+ GV+ D LSE++THL Y A ++ + + + +Q Sbjct: 191 YLGKAVKMGVTRDELSELVTHLSFYIGWPRAISSARVLAEFIRAQSIQ 238