BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1870.p         (154 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002359512.1| hypothetical protein Sbal223_3609 [Shewanell...   132   1e-29
gb|AEH12560.1| hypothetical protein Sbal117_0774 [Shewanella bal...   132   2e-29
ref|YP_001049032.1| hypothetical protein Sbal_0634 [Shewanella b...   131   3e-29
ref|ZP_07392335.1| hypothetical protein Sbal183DRAFT_2173 [Shewa...   129   2e-28
ref|YP_002800682.1| hypothetical protein Avin_35580 [Azotobacter...   127   7e-28

>ref|YP_002359512.1| hypothetical protein Sbal223_3609 [Shewanella baltica OS223]
 gb|ACK48089.1| conserved hypothetical protein-like protein [Shewanella baltica
           OS223]
          Length = 173

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 67/119 (56%), Positives = 80/119 (67%)

Query: 35  AKSLPMTLRITIADTVLTARLEPGPAARDFAALLPLTLELSDYNQTEKIAQLPRKLATRG 94
           AK   + +RI  ADT LTA LE   AARDF  LLPL L L+DYN TEKIA LP KL+ + 
Sbjct: 47  AKKSAVKIRIISADTTLTATLENTQAARDFVTLLPLDLTLADYNGTEKIADLPAKLSHKD 106

Query: 95  EPEGYTPRSGDIAFYAPWGNIALFYKDFAYSKGLVKLGDITGDIAVLRQPGPYMALIEQ 153
            PEGYTP+ GDIA++APWGN+A FY DF YS+GL++LG I G +  L         IEQ
Sbjct: 107 APEGYTPKVGDIAYFAPWGNLAFFYHDFGYSRGLIRLGQIDGSVDALMGDSDIKVRIEQ 165


>gb|AEH12560.1| hypothetical protein Sbal117_0774 [Shewanella baltica OS117]
          Length = 163

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 70/129 (54%), Positives = 84/129 (65%), Gaps = 1/129 (0%)

Query: 25  MTAAAQTRTPAKSLPMTLRITIADTVLTARLEPGPAARDFAALLPLTLELSDYNQTEKIA 84
           MT     ++  KS  + +RI IA T LTA LE   AARDF ALLPL L L+DYN TEKIA
Sbjct: 28  MTMPLAKKSSEKS-AVKIRIIIAGTTLTATLENTQAARDFVALLPLDLTLADYNGTEKIA 86

Query: 85  QLPRKLATRGEPEGYTPRSGDIAFYAPWGNIALFYKDFAYSKGLVKLGDITGDIAVLRQP 144
            LP KL  +  PEGYTP+ GDIA++APWGN+A FY DF YS+GL++LG I G +  L   
Sbjct: 87  DLPAKLLHKDAPEGYTPKVGDIAYFAPWGNLAFFYHDFGYSRGLIRLGQIDGSVDALMGD 146

Query: 145 GPYMALIEQ 153
                 IEQ
Sbjct: 147 SDIKVRIEQ 155


>ref|YP_001049032.1| hypothetical protein Sbal_0634 [Shewanella baltica OS155]
 gb|ABN60163.1| conserved hypothetical protein [Shewanella baltica OS155]
          Length = 177

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 70/129 (54%), Positives = 84/129 (65%), Gaps = 1/129 (0%)

Query: 25  MTAAAQTRTPAKSLPMTLRITIADTVLTARLEPGPAARDFAALLPLTLELSDYNQTEKIA 84
           MT     ++  KS  + +RI IA T LTA LE   AARDF ALLPL L L+DYN TEKIA
Sbjct: 42  MTMPLAKKSSEKS-AVKIRIIIAGTTLTATLENTQAARDFVALLPLDLTLADYNGTEKIA 100

Query: 85  QLPRKLATRGEPEGYTPRSGDIAFYAPWGNIALFYKDFAYSKGLVKLGDITGDIAVLRQP 144
            LP KL  +  PEGYTP+ GDIA++APWGN+A FY DF YS+GL++LG I G +  L   
Sbjct: 101 DLPAKLLHKDAPEGYTPKVGDIAYFAPWGNLAFFYHDFGYSRGLIRLGQIDGSVDALMGD 160

Query: 145 GPYMALIEQ 153
                 IEQ
Sbjct: 161 SDIKVRIEQ 169


>ref|ZP_07392335.1| hypothetical protein Sbal183DRAFT_2173 [Shewanella baltica OS183]
 gb|EFM15601.1| hypothetical protein Sbal183DRAFT_2173 [Shewanella baltica OS183]
 gb|AEG12817.1| hypothetical protein Sbal175_3588 [Shewanella baltica BA175]
          Length = 161

 Score =  129 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 67/129 (51%), Positives = 82/129 (63%), Gaps = 1/129 (0%)

Query: 25  MTAAAQTRTPAKSLPMTLRITIADTVLTARLEPGPAARDFAALLPLTLELSDYNQTEKIA 84
           MT     ++  KS  + +RI IADT L A LE   AARDF  LLPL   L+DYN TEKIA
Sbjct: 28  MTMPLAKKSSEKS-AVKIRIIIADTTLAATLENTEAARDFVTLLPLDFTLADYNGTEKIA 86

Query: 85  QLPRKLATRGEPEGYTPRSGDIAFYAPWGNIALFYKDFAYSKGLVKLGDITGDIAVLRQP 144
            LP KL+ +  PEGYTP+ GDIA++APWGN+A FY DF YS+GL++LG I   +  L   
Sbjct: 87  DLPAKLSHKDAPEGYTPKVGDIAYFAPWGNLAFFYHDFVYSRGLIRLGQIDRSVDALMGD 146

Query: 145 GPYMALIEQ 153
                 IEQ
Sbjct: 147 SDIKVRIEQ 155


>ref|YP_002800682.1| hypothetical protein Avin_35580 [Azotobacter vinelandii DJ]
 gb|ACO79707.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 165

 Score =  127 bits (318), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 75/147 (51%), Positives = 93/147 (63%), Gaps = 8/147 (5%)

Query: 8   RLTVIAVLMAS-ATSLCPMTAAAQTRTPAKSLP-------MTLRITIADTVLTARLEPGP 59
           RL  IAV MAS AT             P   LP       M + I I  T +TA LE   
Sbjct: 9   RLLPIAVSMASMATISADAGTGGGADHPDIRLPVIRQENTMQIGIEIEGTTITATLEDSE 68

Query: 60  AARDFAALLPLTLELSDYNQTEKIAQLPRKLATRGEPEGYTPRSGDIAFYAPWGNIALFY 119
            ARDFA+LLPL+L L DY  TEKI+ LPR+L+T G P+G TP+ GD+A+YAPWGN+A+F+
Sbjct: 69  TARDFASLLPLSLTLEDYASTEKISDLPRRLSTSGAPDGITPKVGDLAYYAPWGNLAIFH 128

Query: 120 KDFAYSKGLVKLGDITGDIAVLRQPGP 146
           K+F YS GLVKLG +   I +LR+PGP
Sbjct: 129 KNFRYSSGLVKLGTLDLGIELLRRPGP 155