BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1860.p (354 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777866.1| galactose-1-epimerase [Herbaspirillum serope... 665 0.0 ref|YP_004753805.1| D-xylose-specific 1-epimerase [Collimonas fu... 492 e-137 ref|ZP_02882349.1| Aldose 1-epimerase [Burkholderia graminis C4D... 377 e-102 ref|YP_003909652.1| Aldose 1-epimerase [Burkholderia sp. CCGE100... 375 e-102 ref|ZP_03266653.1| Aldose 1-epimerase [Burkholderia sp. H160] >g... 374 e-101 >ref|YP_003777866.1| galactose-1-epimerase [Herbaspirillum seropedicae SmR1] gb|ADJ65958.1| galactose-1-epimerase (mutarotase) protein [Herbaspirillum seropedicae SmR1] Length = 354 Score = 665 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 320/354 (90%), Positives = 335/354 (94%) Query: 1 MTHFTLSHTTSADGIRLYTLRNHTGMRVTISDLGATMVNWWAPDRYGREADVLLGFERVG 60 MTHFTLSHTT+A+G++LYTLRNHTGMRVTIS+LGA+M+NWWAPDRYGREADVLLGF V Sbjct: 1 MTHFTLSHTTAANGVQLYTLRNHTGMRVTISNLGASMINWWAPDRYGREADVLLGFADVQ 60 Query: 61 QYTNNPAYFGAIVGRWGNRIAGGRFELDGVAHQVDCNEGQNHLHGGREGFHAQRWQVQPD 120 QY +NPAYFGAIVGRWGNRIA GRF LDGVAHQVDCNEG+NHLHGG EGFH Q WQVQPD Sbjct: 61 QYQHNPAYFGAIVGRWGNRIAAGRFNLDGVAHQVDCNEGENHLHGGVEGFHRQLWQVQPD 120 Query: 121 PEGLRLMLVSPAGQAGFPGTVMASVLYRLDDEGQLRIDYTATSDAATPINLTSHAYFNLN 180 PEGLRLMLVSPAGQAGFPGTVMASVLYRLDDEGQLRIDYTATSDAATPINLTSHAYFNLN Sbjct: 121 PEGLRLMLVSPAGQAGFPGTVMASVLYRLDDEGQLRIDYTATSDAATPINLTSHAYFNLN 180 Query: 181 GGTSDIRDHIIAIEADGYLQVDAKLIPEGRADVAGSAFDFRQPAPIGPRLDWPDPQLKLA 240 GG SDIRDHIIAI+AD YLQVDAKLIP GRA+VAGSAFDFRQPAPIGPRLDWPDPQLKLA Sbjct: 181 GGASDIRDHIIAIDADAYLQVDAKLIPVGRAEVAGSAFDFRQPAPIGPRLDWPDPQLKLA 240 Query: 241 GGFDHCYCLRSEHEPQPGQSRVAQTLREVASVYEPGSGRELRVSTTETGLQFYSGNFLSG 300 GGFDHCYCLRSE EP PG+ R+AQ LREVA+VYEPGSGRELRVSTTE GLQFYSGNFLSG Sbjct: 241 GGFDHCYCLRSEREPAPGEGRIAQALREVATVYEPGSGRELRVSTTEIGLQFYSGNFLSG 300 Query: 301 VQGRGEQPYAIHDGFCLEAQSYPDQVNTPLREAVILRPGQVYRQTTVYRLGVRD 354 V+GRGEQPYAIHDGFCLEAQSYPDQVNTPL EAVILRPGQVYRQTT YRLGVRD Sbjct: 301 VEGRGEQPYAIHDGFCLEAQSYPDQVNTPLCEAVILRPGQVYRQTTAYRLGVRD 354 >ref|YP_004753805.1| D-xylose-specific 1-epimerase [Collimonas fungivorans Ter331] gb|AEK62982.1| D-xylose-specific 1-epimerase (mutarotase) [Collimonas fungivorans Ter331] Length = 355 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 243/355 (68%), Positives = 280/355 (78%), Gaps = 2/355 (0%) Query: 1 MTHFTLSHTTSADGIRLYTLRNHTGMRVTISDLGATMVNWWAPDRYGREADVLLGFERVG 60 MT ++S T G+ LYTLRN MRV ISD GAT+V+WWAPDRYGR AD+LLG+ Sbjct: 1 MTQTSISSTPGEYGVTLYTLRNAHDMRVLISDRGATLVSWWAPDRYGRVADILLGYPDED 60 Query: 61 QYTNNPAYFGAIVGRWGNRIAGGRFELDGVAHQVDCNEGQNHLHGGREGFHAQRWQVQPD 120 Y NP+YFG++VGRWGNRIA GRF +DG + VD N G NHLHGG GFH +W+ +P Sbjct: 61 GYQANPSYFGSLVGRWGNRIAKGRFTVDGAEYLVDRNNGNNHLHGGDTGFHLAQWRAEPG 120 Query: 121 PEGLRLMLVSPAGQAGFPGTVMASVLYRLDDEGQLRIDYTATSDAATPINLTSHAYFNLN 180 P+GLRL L SP G G+PG V ASVLY LDD G+L IDY+ATSDA TP+NLTSH YFNLN Sbjct: 121 PDGLRLTLESPDGDGGYPGHVQASVLYSLDDNGRLSIDYSATSDAPTPLNLTSHGYFNLN 180 Query: 181 GGTSDIRDHIIAIEADGYLQVDAKLIPEGRADVAGSAFDFRQPAPIGPRLDWPDPQLKLA 240 GG+SDI DHI+AI AD YLQ+D +LIP G ADVAGSA DFRQPAPIGPRL WPD QLKLA Sbjct: 181 GGSSDIYDHILAIAADQYLQIDGQLIPTGAADVAGSALDFRQPAPIGPRLAWPDTQLKLA 240 Query: 241 GGFDHCYCLRSEHEPQ--PGQSRVAQTLREVASVYEPGSGRELRVSTTETGLQFYSGNFL 298 GGFDHCYCLR + PGQ R AQ LR+VA+VY+PGSGR+L V+TTE GLQFYSGNFL Sbjct: 241 GGFDHCYCLRPQDGAAHVPGQGRSAQPLRDVATVYDPGSGRQLSVATTENGLQFYSGNFL 300 Query: 299 SGVQGRGEQPYAIHDGFCLEAQSYPDQVNTPLREAVILRPGQVYRQTTVYRLGVR 353 G+QGRG +PYAIHDGFCLEAQ+YPDQ+N+ EAVILRPGQVYRQTT Y++ VR Sbjct: 301 EGIQGRGAKPYAIHDGFCLEAQAYPDQINSADAEAVILRPGQVYRQTTTYQISVR 355 >ref|ZP_02882349.1| Aldose 1-epimerase [Burkholderia graminis C4D1M] gb|EDT12594.1| Aldose 1-epimerase [Burkholderia graminis C4D1M] Length = 357 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 197/345 (57%), Positives = 234/345 (67%), Gaps = 9/345 (2%) Query: 12 ADGIRLYTLRNHTGMRVTISDLGATMVNWWAPDRYGREADVLLGFERVGQYTNNPAYFGA 71 D +RL+TLRN GM+V ISDLGAT+V+W APDR GR D+LLG + QY + G Sbjct: 18 GDPVRLFTLRNAHGMKVAISDLGATLVSWHAPDRAGRLGDILLGHDTPAQYFAATTFMGG 77 Query: 72 IVGRWGNRIAGGRFELDGVAHQVDCNEGQNHLHGGREGFHAQRWQVQPDPEGLRLMLVSP 131 ++GRW NRIA RF LDG+ + +D NEG LHGG GFH W V D L + L SP Sbjct: 78 LIGRWANRIADARFTLDGIEYTLDRNEGTKLLHGGSVGFHRAMWDVSEDNGSLLMRLESP 137 Query: 132 AGQAGFPGTVMASVLYRLDDEGQLRIDYTATSDAATPINLTSHAYFNLNG-GTSDIRDHI 190 G AGFPG V A V Y LDD+G L I+Y A +DAATP+NLTSH YFNL G +DIR H+ Sbjct: 138 EGDAGFPGNVTAQVRYTLDDDGTLTIEYEAIADAATPLNLTSHGYFNLTGRAGADIRGHM 197 Query: 191 IAIEADGYLQVDAKLIPEGRADVAGSAFDFRQPAPIGPRLDWPDPQLKLAGGFDHCYCLR 250 ++I+AD + +VDA +IP ADVAG+AFDFRQ APIG RL+WP QL AGGFDHCY LR Sbjct: 198 LSIDADRFFEVDAAMIPSKLADVAGNAFDFRQSAPIGARLEWPHAQLVQAGGFDHCYVLR 257 Query: 251 SEHEPQPGQSRVAQTLREVASVYEPGSGRELRVSTTETGLQFYSGNFLSGVQGRGEQPYA 310 PG A +REVA +Y+PGSGREL VST + GLQFYSGNFL G GRG Y Sbjct: 258 D----APGG---AGKVREVACLYDPGSGRELTVSTDQRGLQFYSGNFLKGDAGRGGARYQ 310 Query: 311 IHDGFCLEAQSYPDQVNTPLREA-VILRPGQVYRQTTVYRLGVRD 354 H G CLEA +P+QVN P + VILRPG YRQ T YR+GVR+ Sbjct: 311 THAGLCLEAGGFPNQVNMPEEQNDVILRPGDTYRQVTAYRVGVRE 355 >ref|YP_003909652.1| Aldose 1-epimerase [Burkholderia sp. CCGE1003] gb|ADN60361.1| Aldose 1-epimerase [Burkholderia sp. CCGE1003] Length = 357 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 194/344 (56%), Positives = 232/344 (67%), Gaps = 9/344 (2%) Query: 13 DGIRLYTLRNHTGMRVTISDLGATMVNWWAPDRYGREADVLLGFERVGQYTNNPAYFGAI 72 D + L+TLRN GM+V ISDLGAT+V+W APDR GR D+LLG + QY Y G + Sbjct: 19 DRVSLFTLRNAHGMKVAISDLGATLVSWHAPDRAGRLGDILLGHDTPAQYVAATTYMGGL 78 Query: 73 VGRWGNRIAGGRFELDGVAHQVDCNEGQNHLHGGREGFHAQRWQVQPDPEGLRLMLVSPA 132 +GRW NRIA RF LDG+ + +D NEG LHGG GFH W V D L + L SP Sbjct: 79 IGRWANRIADARFTLDGIQYTLDRNEGTRLLHGGSVGFHRMLWDVSEDNGSLLMRLESPE 138 Query: 133 GQAGFPGTVMASVLYRLDDEGQLRIDYTATSDAATPINLTSHAYFNLNGGT-SDIRDHII 191 G AGFPG V V Y LDD+G L I+Y A SDAATP+NLTSH YFNL G +DIR H++ Sbjct: 139 GDAGFPGNVTTQVRYTLDDDGTLTIEYEAVSDAATPLNLTSHGYFNLTGRPGTDIRGHML 198 Query: 192 AIEADGYLQVDAKLIPEGRADVAGSAFDFRQPAPIGPRLDWPDPQLKLAGGFDHCYCLRS 251 +I+AD + ++DA +IP G ADVAG+AFDFRQ APIG RLDWP QL AGGFDHCY LR Sbjct: 199 SIDADQFYEIDAAMIPCGLADVAGNAFDFRQSAPIGARLDWPHAQLVQAGGFDHCYVLRD 258 Query: 252 EHEPQPGQSRVAQTLREVASVYEPGSGRELRVSTTETGLQFYSGNFLSGVQGRGEQPYAI 311 + A +REVA +Y+PGSGRE+ VST + GLQFYSGN+L G GRG Y Sbjct: 259 SADG-------AGKVREVACLYDPGSGREMTVSTDQRGLQFYSGNWLKGEAGRGGVVYHA 311 Query: 312 HDGFCLEAQSYPDQVNTPL-REAVILRPGQVYRQTTVYRLGVRD 354 H CLEA +P+QVN P RE +ILRPG YRQ T YR+GVR+ Sbjct: 312 HAALCLEAGGFPNQVNMPAEREELILRPGDTYRQVTAYRVGVRE 355 >ref|ZP_03266653.1| Aldose 1-epimerase [Burkholderia sp. H160] gb|EEA01785.1| Aldose 1-epimerase [Burkholderia sp. H160] Length = 361 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 193/343 (56%), Positives = 231/343 (67%), Gaps = 3/343 (0%) Query: 12 ADGIRLYTLRNHTGMRVTISDLGATMVNWWAPDRYGREADVLLGFERVGQYTNNPAYFGA 71 D +RLYTLRN GM+V ISDLGAT+V+W APDR GR D+LLG + +Y Y G Sbjct: 18 GDRVRLYTLRNAHGMKVAISDLGATLVSWHAPDRAGRLGDILLGHDTPAEYVAATTYMGG 77 Query: 72 IVGRWGNRIAGGRFELDGVAHQVDCNEGQNHLHGGREGFHAQRWQVQPDPEGLRLMLVSP 131 ++GRW NRIAG RF LDG+ + +D NEG N LHGG GFH W V D L + L SP Sbjct: 78 LIGRWANRIAGARFSLDGIEYTLDRNEGPNLLHGGTIGFHRALWDVSEDDGALLMRLESP 137 Query: 132 AGQAGFPGTVMASVLYRLDDEGQLRIDYTATSDAATPINLTSHAYFNLNG-GTSDIRDHI 190 G AGFPG V V Y LDD+G L I Y A +DA TP+NLTSH YFNL G +DIR H+ Sbjct: 138 EGDAGFPGNVTVQVRYSLDDDGTLTIAYEAITDAPTPLNLTSHPYFNLTGRADTDIRGHV 197 Query: 191 IAIEADGYLQVDAKLIPEGRADVAGSAFDFRQPAPIGPRLDWPDPQLKLAGGFDHCYCLR 250 ++I+A+ + +VDA +IP ADVAG+AFDFRQ APIG RLDWP QL AGGFDHCY LR Sbjct: 198 LSIDAERFFEVDATMIPCKLADVAGNAFDFRQSAPIGGRLDWPHAQLARAGGFDHCYVLR 257 Query: 251 SEHEPQPGQSRVAQTLREVASVYEPGSGRELRVSTTETGLQFYSGNFLSGVQGRGEQPYA 310 P G + VA LREVA Y+PGSGREL V+T + GLQFY+GN L+G GRG Y Sbjct: 258 --EAPDAGINDVAPPLREVACAYDPGSGRELTVATDQRGLQFYTGNALNGNPGRGGVRYQ 315 Query: 311 IHDGFCLEAQSYPDQVNTPLREAVILRPGQVYRQTTVYRLGVR 353 H G CLEA +P++VN + VI+RPG YRQ T YR+ VR Sbjct: 316 RHAGLCLEAGGFPNEVNMTGQHEVIVRPGDTYRQITTYRVDVR 358