BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1838.p (177 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777890.1| low temperature-induced protein [Herbaspiril... 299 9e-80 ref|ZP_02883691.1| Ferritin Dps family protein [Burkholderia gra... 246 7e-64 ref|ZP_08531115.1| putative ferritin-family protein [Agrobacteri... 246 8e-64 ref|YP_004444384.1| Ferritin Dps family protein [Agrobacterium s... 244 4e-63 ref|YP_003907048.1| Ferritin Dps family protein [Burkholderia sp... 243 1e-62 >ref|YP_003777890.1| low temperature-induced protein [Herbaspirillum seropedicae SmR1] gb|ADJ65982.1| low temperature-induced protein [Herbaspirillum seropedicae SmR1] Length = 162 Score = 299 bits (766), Expect = 9e-80, Method: Composition-based stats. Identities = 148/161 (91%), Positives = 157/161 (97%) Query: 16 LAPLATPGVLSAQASQEIGGALTMLLADIFALYLKTKNFHWHMSGPHFRDYHLLLDDQSQ 75 +APLATPGVLS QA QE+GGALTMLLAD+FALYLKTKNFHWHMSGPHFRDYHLLLDDQSQ Sbjct: 1 MAPLATPGVLSEQARQEVGGALTMLLADVFALYLKTKNFHWHMSGPHFRDYHLLLDDQSQ 60 Query: 76 QILAITDAVAERVRKIGATTLRSTGQVGKLQRLADNDADFVTPSDMLAELREDNLRLVGF 135 QI+AITDAVAERVRKIG TTLRSTG +GKLQRL+DNDADFVTP+DMLAELREDNLRLVGF Sbjct: 61 QIIAITDAVAERVRKIGGTTLRSTGHIGKLQRLSDNDADFVTPADMLAELREDNLRLVGF 120 Query: 136 MMATHELCDEHGDVATASLLENWIDEAEQRAWFLFESGRTS 176 MMATHELCD+HGDVATASLLENWIDEAEQRAWFLFESGR+S Sbjct: 121 MMATHELCDQHGDVATASLLENWIDEAEQRAWFLFESGRSS 161 >ref|ZP_02883691.1| Ferritin Dps family protein [Burkholderia graminis C4D1M] gb|EDT11123.1| Ferritin Dps family protein [Burkholderia graminis C4D1M] Length = 172 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 123/160 (76%), Positives = 134/160 (83%) Query: 15 RLAPLATPGVLSAQASQEIGGALTMLLADIFALYLKTKNFHWHMSGPHFRDYHLLLDDQS 74 R APL TP LS A+++I ALT LLAD+FALYLKTKNFHWHMSGP+FRDYHLLLD+QS Sbjct: 11 RAAPLKTPTRLSEDATRDIAAALTTLLADVFALYLKTKNFHWHMSGPYFRDYHLLLDEQS 70 Query: 75 QQILAITDAVAERVRKIGATTLRSTGQVGKLQRLADNDADFVTPSDMLAELREDNLRLVG 134 QI A TD +AER RKIG TLRS G + KLQR+ADNDADFVTP DMLAELREDNL L G Sbjct: 71 DQIYATTDPIAERARKIGGKTLRSAGHITKLQRIADNDADFVTPDDMLAELREDNLALAG 130 Query: 135 FMMATHELCDEHGDVATASLLENWIDEAEQRAWFLFESGR 174 +M TH LCDE+GDVATASLLENWIDEAEQR WFLFESGR Sbjct: 131 YMRETHSLCDEYGDVATASLLENWIDEAEQRVWFLFESGR 170 >ref|ZP_08531115.1| putative ferritin-family protein [Agrobacterium sp. ATCC 31749] gb|EGL62179.1| putative ferritin-family protein [Agrobacterium sp. ATCC 31749] Length = 172 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 119/167 (71%), Positives = 139/167 (83%) Query: 8 RQQLEKRRLAPLATPGVLSAQASQEIGGALTMLLADIFALYLKTKNFHWHMSGPHFRDYH 67 R EK R +PLATP LS+ A+ +I GALT LLAD+FALYLKTKNFHWHMSGPHFRDYH Sbjct: 3 RTLTEKHRKSPLATPTSLSSNATTDISGALTALLADVFALYLKTKNFHWHMSGPHFRDYH 62 Query: 68 LLLDDQSQQILAITDAVAERVRKIGATTLRSTGQVGKLQRLADNDADFVTPSDMLAELRE 127 L+LD+Q +QI A+TD +AERVRK+G TT+RS G + ++QRL DNDADFVTP DMLAEL E Sbjct: 63 LMLDEQGEQIFAMTDDIAERVRKVGGTTIRSIGHIARVQRLLDNDADFVTPDDMLAELHE 122 Query: 128 DNLRLVGFMMATHELCDEHGDVATASLLENWIDEAEQRAWFLFESGR 174 DNL LV M TH LCDEHGD+ATASL+ENW+DEAE+RAWFLFE+ R Sbjct: 123 DNLTLVSLMKETHALCDEHGDIATASLIENWVDEAERRAWFLFETTR 169 >ref|YP_004444384.1| Ferritin Dps family protein [Agrobacterium sp. H13-3] gb|ADY67293.1| Ferritin Dps family protein [Agrobacterium sp. H13-3] Length = 172 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 119/167 (71%), Positives = 138/167 (82%) Query: 8 RQQLEKRRLAPLATPGVLSAQASQEIGGALTMLLADIFALYLKTKNFHWHMSGPHFRDYH 67 R EK R +PLATP L A+ +I GALT LLAD+FALYLKTKNFHWHMSGPHFRDYH Sbjct: 3 RTLAEKHRKSPLATPTALGTNATADISGALTALLADVFALYLKTKNFHWHMSGPHFRDYH 62 Query: 68 LLLDDQSQQILAITDAVAERVRKIGATTLRSTGQVGKLQRLADNDADFVTPSDMLAELRE 127 L+LD+Q +QI A+TD +AER RKIG TTLRS + +LQRL DNDADFVTP+DMLAELR+ Sbjct: 63 LMLDEQGEQIFAMTDDIAERARKIGGTTLRSISHISRLQRLLDNDADFVTPADMLAELRD 122 Query: 128 DNLRLVGFMMATHELCDEHGDVATASLLENWIDEAEQRAWFLFESGR 174 DNL LV M ATH LC++HGD+ATASL+ENW+DEAE+RAWFLFES R Sbjct: 123 DNLTLVSLMKATHNLCEDHGDIATASLIENWVDEAERRAWFLFESTR 169 >ref|YP_003907048.1| Ferritin Dps family protein [Burkholderia sp. CCGE1003] gb|ADN57757.1| Ferritin Dps family protein [Burkholderia sp. CCGE1003] Length = 177 Score = 243 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 120/157 (76%), Positives = 133/157 (84%) Query: 18 PLATPGVLSAQASQEIGGALTMLLADIFALYLKTKNFHWHMSGPHFRDYHLLLDDQSQQI 77 PL TP LS A+++I ALT LLAD+FALYLKTKNFHWHMS P+FRDYHLLLD+QS QI Sbjct: 19 PLGTPTRLSEDATRDIAAALTTLLADVFALYLKTKNFHWHMSVPYFRDYHLLLDEQSSQI 78 Query: 78 LAITDAVAERVRKIGATTLRSTGQVGKLQRLADNDADFVTPSDMLAELREDNLRLVGFMM 137 A TD +AER RKIG TLRSTG + KLQR+ADNDA+FVTP+DMLAELREDNL L G+M Sbjct: 79 YATTDPIAERARKIGGRTLRSTGHITKLQRIADNDAEFVTPADMLAELREDNLALAGYMR 138 Query: 138 ATHELCDEHGDVATASLLENWIDEAEQRAWFLFESGR 174 TH LCDE+GDVATASLLENWIDEAEQR WFLFESGR Sbjct: 139 ETHSLCDEYGDVATASLLENWIDEAEQRVWFLFESGR 175