BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1821.p (362 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777906.1| spermidine/putrescine ABC transporter ATPase... 671 0.0 emb|CAM32696.2| ABC-type spermidine/putrescine transport systems... 627 e-178 ref|YP_004755079.1| spermidine putrescine transport ATP-binding ... 526 e-147 ref|NP_521060.1| ABC transporter ATP-binding protein [Ralstonia ... 467 e-129 emb|CCA85304.1| putative atp-binding abc transporter protein [Ra... 467 e-129 >ref|YP_003777906.1| spermidine/putrescine ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ65998.1| ABC-type spermidine/putrescine transport systems, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 362 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 343/362 (94%), Positives = 351/362 (96%) Query: 1 MTELSVNDLHLDYGTGASANPILKGVSMQLQRGEVVALLGPSGSGKTTLLRAVAGLESPK 60 MTELSVNDLHLDYGTGA ANPILKGVSM+LQRGEVVALLGPSGSGKTTLLRAVAGLESPK Sbjct: 1 MTELSVNDLHLDYGTGAHANPILKGVSMELQRGEVVALLGPSGSGKTTLLRAVAGLESPK 60 Query: 61 AGTIDIGTRRVFDGARNFEMPAEERNLGLVFQSYALWPHKTVADNVAYGLKLRKTPSAEI 120 AG IDIG RRVFDGARNFEMPAEERNLGLVFQSYALWPHKTVADNVAYGLKLRKTPS EI Sbjct: 61 AGAIDIGKRRVFDGARNFEMPAEERNLGLVFQSYALWPHKTVADNVAYGLKLRKTPSGEI 120 Query: 121 AKRVKEVLSQLGLGHLGERYPHQLSGGQQQRVAIARALVYNPQVILLDEPLSNLDAKLRE 180 A RVK VLSQLGLGHLGERYPHQLSGGQQQRVAIARALVYNPQVILLDEPLSNLDAKLRE Sbjct: 121 ATRVKAVLSQLGLGHLGERYPHQLSGGQQQRVAIARALVYNPQVILLDEPLSNLDAKLRE 180 Query: 181 EARAFLRELIVRLGLSALMVTHDQGEAMAISDRILLLNNGRIEQQGTPQSMYQTPNTLFT 240 EARAFLRELIVRLGLSALMVTHDQGEAMAISDRILLLNNGRIEQQGTPQSMYQ PNTLFT Sbjct: 181 EARAFLRELIVRLGLSALMVTHDQGEAMAISDRILLLNNGRIEQQGTPQSMYQAPNTLFT 240 Query: 241 AEFMGSNNKLAAEVVSREGDRVTVKLDGGTAVATLRGREDAKPGEQLTGIIRVEQVRIAG 300 AEFMGSNNKLAAEV+SREG+RVTVKLDGGTAVATLRGR D +PGEQLTGIIRVEQVRI+G Sbjct: 241 AEFMGSNNKLAAEVLSREGERVTVKLDGGTAVATLRGRSDVRPGEQLTGIIRVEQVRISG 300 Query: 301 EQTGNAIRLPLSTCMYLGDRWECLFKVEGGPAGSVGLRAYAPQRLDQGEYWLSLPEQALW 360 E + NAIRLPLSTCMYLGDRWECLFKV+GGPAGSVGLRAYAPQRLDQGEYWLSLPEQ+LW Sbjct: 301 EASDNAIRLPLSTCMYLGDRWECLFKVDGGPAGSVGLRAYAPQRLDQGEYWLSLPEQSLW 360 Query: 361 AF 362 AF Sbjct: 361 AF 362 >emb|CAM32696.2| ABC-type spermidine/putrescine transport systems, ATPase component protein [Herbaspirillum seropedicae] Length = 363 Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats. Identities = 327/364 (89%), Positives = 338/364 (92%), Gaps = 3/364 (0%) Query: 1 MTELSVNDLHLDYGTGASANPILKGVSMQLQRGEVVALLGPSGSGKTTLL--RAVAGLES 58 MTELSVNDLHLDYGTGA ANPILKGVSM+LQRGEVVALLGPSGSGKTT R AG+ Sbjct: 1 MTELSVNDLHLDYGTGAHANPILKGVSMELQRGEVVALLGPSGSGKTTFAARRGRAGIAQ 60 Query: 59 PKAGTIDIGTRRVFDGARNFEMPAEERNLGLVFQSYALWPHKTVADNVAYGLKLRKTPSA 118 + G+ VFDGARNFEMPAEERNLGLVFQSYALWPHKTVADNVAYGLKLRKTPS Sbjct: 61 MPVPSTS-GSAGVFDGARNFEMPAEERNLGLVFQSYALWPHKTVADNVAYGLKLRKTPSG 119 Query: 119 EIAKRVKEVLSQLGLGHLGERYPHQLSGGQQQRVAIARALVYNPQVILLDEPLSNLDAKL 178 EIA RVK VLSQLGLGHLGERYPHQLSGGQQQRVAIARALVYNPQVILLDEPLSNLDAKL Sbjct: 120 EIATRVKAVLSQLGLGHLGERYPHQLSGGQQQRVAIARALVYNPQVILLDEPLSNLDAKL 179 Query: 179 REEARAFLRELIVRLGLSALMVTHDQGEAMAISDRILLLNNGRIEQQGTPQSMYQTPNTL 238 REEARAFLRELIVRLGLSALMVTHDQGEAMAISDRILLLNNGRIEQQGTPQSMYQ PNTL Sbjct: 180 REEARAFLRELIVRLGLSALMVTHDQGEAMAISDRILLLNNGRIEQQGTPQSMYQAPNTL 239 Query: 239 FTAEFMGSNNKLAAEVVSREGDRVTVKLDGGTAVATLRGREDAKPGEQLTGIIRVEQVRI 298 FTAEFMGSNNKLAAEV+SREG+RVTVKLDGGTAVATLRGR D +PGEQLTGIIRVEQVRI Sbjct: 240 FTAEFMGSNNKLAAEVLSREGERVTVKLDGGTAVATLRGRSDVRPGEQLTGIIRVEQVRI 299 Query: 299 AGEQTGNAIRLPLSTCMYLGDRWECLFKVEGGPAGSVGLRAYAPQRLDQGEYWLSLPEQA 358 +GE + NAIRLPLSTCMYLGDRWECLFKV+GGPAGSVGLRAYAPQRLDQGEYWLSLPEQ+ Sbjct: 300 SGEASDNAIRLPLSTCMYLGDRWECLFKVDGGPAGSVGLRAYAPQRLDQGEYWLSLPEQS 359 Query: 359 LWAF 362 LWAF Sbjct: 360 LWAF 363 >ref|YP_004755079.1| spermidine putrescine transport ATP-binding protein potA [Collimonas fungivorans Ter331] gb|AEK64256.1| Spermidine Putrescine transport ATP-binding protein potA [Collimonas fungivorans Ter331] Length = 363 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 280/363 (77%), Positives = 310/363 (85%), Gaps = 1/363 (0%) Query: 1 MTELSVNDLHLDYGTGASANPILKGVSMQLQRGEVVALLGPSGSGKTTLLRAVAGLESPK 60 M+ELSVN+LHLDYG+GASANPILKGVSM+LQRGEVVALLGPSGSGKTTLLRAVAGLESPK Sbjct: 1 MSELSVNNLHLDYGSGASANPILKGVSMELQRGEVVALLGPSGSGKTTLLRAVAGLESPK 60 Query: 61 AGTIDIGTRRVFDGARNFEMPAEERNLGLVFQSYALWPHKTVADNVAYGLKLRKTPSAEI 120 +G+I IG R +FDG R E+PAEERNLGLVFQSYALWPHKTV+DNV YGLKLRK S++I Sbjct: 61 SGSIQIGERAMFDGQRKLEIPAEERNLGLVFQSYALWPHKTVSDNVGYGLKLRKMNSSDI 120 Query: 121 AKRVKEVLSQLGLGHLGERYPHQLSGGQQQRVAIARALVYNPQVILLDEPLSNLDAKLRE 180 A RVK VL QLGLGHLG+R+PHQLSGGQQQRVAIARALVYNP VILLDEPLSNLDAKLRE Sbjct: 121 AARVKTVLGQLGLGHLGDRFPHQLSGGQQQRVAIARALVYNPPVILLDEPLSNLDAKLRE 180 Query: 181 EARAFLRELIVRLGLSALMVTHDQGEAMAISDRILLLNNGRIEQQGTPQSMYQTPNTLFT 240 EARAFLRELIVRLGLSALMVTHDQ EAMAISDRILLLNNG+IEQQGTPQSMY+TP+TLFT Sbjct: 181 EARAFLRELIVRLGLSALMVTHDQAEAMAISDRILLLNNGKIEQQGTPQSMYETPDTLFT 240 Query: 241 AEFMGSNNKLAAEVVSREGDRVTVKLDGGTAVATLRGREDAKPGEQLTGIIRVEQVRIAG 300 AEFMGSNN+L A+V+ R+G ++++GG ATLRG + IIRVEQV I+ Sbjct: 241 AEFMGSNNRLPAKVLERDGGHALLQVEGGDVKATLRGPTICSGDKDAVAIIRVEQVNISA 300 Query: 301 EQTGNAIRLPLSTCMYLGDRWECLFK-VEGGPAGSVGLRAYAPQRLDQGEYWLSLPEQAL 359 Q NAIRLPLSTCMYLGDRWEC+F+ A S LRAYA RL GEYWL LP++AL Sbjct: 301 TQVDNAIRLPLSTCMYLGDRWECVFRNTAASGADSTVLRAYARHRLAPGEYWLQLPQEAL 360 Query: 360 WAF 362 WAF Sbjct: 361 WAF 363 >ref|NP_521060.1| ABC transporter ATP-binding protein [Ralstonia solanacearum GMI1000] emb|CAD16646.1| probable atp-binding abc transporter protein [Ralstonia solanacearum GMI1000] Length = 358 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 252/363 (69%), Positives = 285/363 (78%), Gaps = 8/363 (2%) Query: 1 MTELSVNDLHLDYGTGASANPILKGVSMQLQRGEVVALLGPSGSGKTTLLRAVAGLESPK 60 M EL+VNDLHL+YG NP+LKGVSMQLQ+GEVV+LLGPSGSGKTTLLRAVAGLE Sbjct: 1 MIELTVNDLHLEYGN----NPVLKGVSMQLQKGEVVSLLGPSGSGKTTLLRAVAGLEQAS 56 Query: 61 AGTIDIGTRRVFDGARNFEMPAEERNLGLVFQSYALWPHKTVADNVAYGLKLRKTPSAEI 120 +GT+ IG R +FD A ++PAE RNLGLVFQSYALWPHKTVA+NVAY LKLRKTP A+I Sbjct: 57 SGTVKIGERVMFDDAAGLDVPAEARNLGLVFQSYALWPHKTVAENVAYPLKLRKTPPAQI 116 Query: 121 AKRVKEVLSQLGLGHLGERYPHQLSGGQQQRVAIARALVYNPQVILLDEPLSNLDAKLRE 180 +RV+ VL QLGLGHLGER+P QLSGGQQQRVAIARALVYNP VILLDEPLSNLDAKLRE Sbjct: 117 KERVQAVLQQLGLGHLGERFPSQLSGGQQQRVAIARALVYNPPVILLDEPLSNLDAKLRE 176 Query: 181 EARAFLRELIVRLGLSALMVTHDQGEAMAISDRILLLNNGRIEQQGTPQSMYQTPNTLFT 240 EARAFLRELIVRLGLSALMVTHDQGEAMA+SDRILLLNNG IEQQGTP+ MY P TLFT Sbjct: 177 EARAFLRELIVRLGLSALMVTHDQGEAMAMSDRILLLNNGVIEQQGTPEQMYGAPETLFT 236 Query: 241 AEFMGSNNKLAAEVVS-REGDRVTVKLDGGTAVATLRGREDAKPGEQLTGIIRVEQVRIA 299 AEFMGSNN++ ++ R+G V GG ++ + R D KPG G+IR+EQVR+ Sbjct: 237 AEFMGSNNRINGKIAEVRDGMARLVDEAGGWSLWGV-ARGDLKPGATAHGVIRLEQVRVG 295 Query: 300 GEQTGNAIRLPLSTCMYLGDRWECLFKVEGGPAGSVGLRAYAPQRLDQGEYWLSLPEQAL 359 + N IRLPL+T MYLGDRWECLF+ G A GLRAYA GEY L+ P + Sbjct: 296 LDNADNTIRLPLATRMYLGDRWECLFR--GTGAAGTGLRAYASNAPGDGEYALTFPREQF 353 Query: 360 WAF 362 W F Sbjct: 354 WLF 356 >emb|CCA85304.1| putative atp-binding abc transporter protein [Ralstonia syzygii R24] Length = 358 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 252/363 (69%), Positives = 285/363 (78%), Gaps = 8/363 (2%) Query: 1 MTELSVNDLHLDYGTGASANPILKGVSMQLQRGEVVALLGPSGSGKTTLLRAVAGLESPK 60 M EL+VNDLHL YG NP+LKGVSMQLQ+GEVV+LLGPSGSGKTTLLRAVAGLE Sbjct: 1 MIELTVNDLHLGYGN----NPVLKGVSMQLQKGEVVSLLGPSGSGKTTLLRAVAGLEQAS 56 Query: 61 AGTIDIGTRRVFDGARNFEMPAEERNLGLVFQSYALWPHKTVADNVAYGLKLRKTPSAEI 120 GT+ IG R +FDGA ++PAE RNLGLVFQSYALWPHKTVA+NVAY LKLRKTP+A+I Sbjct: 57 RGTVKIGERVMFDGATGLDVPAEARNLGLVFQSYALWPHKTVAENVAYPLKLRKTPAAQI 116 Query: 121 AKRVKEVLSQLGLGHLGERYPHQLSGGQQQRVAIARALVYNPQVILLDEPLSNLDAKLRE 180 +RV+ VL QLGLGHLGER+P QLSGGQQQRVAIARALVYNP VILLDEPLSNLDAKLRE Sbjct: 117 KERVQAVLQQLGLGHLGERFPSQLSGGQQQRVAIARALVYNPPVILLDEPLSNLDAKLRE 176 Query: 181 EARAFLRELIVRLGLSALMVTHDQGEAMAISDRILLLNNGRIEQQGTPQSMYQTPNTLFT 240 EARAFLRELIVRLGLSALMVTHDQGEAMA+SDRILLLNNG IEQQGTP+ MY P TLFT Sbjct: 177 EARAFLRELIVRLGLSALMVTHDQGEAMAMSDRILLLNNGVIEQQGTPEQMYGAPETLFT 236 Query: 241 AEFMGSNNKLAAEVVS-REGDRVTVKLDGGTAVATLRGREDAKPGEQLTGIIRVEQVRIA 299 AEFMGSNN++ ++ R+G V GG ++ + R D KPG G+IR+EQVR+ Sbjct: 237 AEFMGSNNRINGKIAEVRDGMARLVDEAGGWSLWGV-ARGDLKPGTAAHGVIRLEQVRVG 295 Query: 300 GEQTGNAIRLPLSTCMYLGDRWECLFKVEGGPAGSVGLRAYAPQRLDQGEYWLSLPEQAL 359 + N IRLPL+T MYLGDRWECLF+ G A GLRAYA G+Y L+ P + Sbjct: 296 LDNADNTIRLPLATRMYLGDRWECLFR--GAGAAGTGLRAYASNAPGDGDYALTFPREQF 353 Query: 360 WAF 362 W F Sbjct: 354 WLF 356