BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1811.p (267 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778102.1| phosphate/phosphonate ABC transporter permea... 417 e-115 ref|NP_887495.1| phosphate/phosphonate ABC transporter permease ... 320 2e-85 ref|NP_883180.1| binding-protein-dependent transport systems inn... 317 9e-85 ref|NP_881998.1| binding-protein-dependent transport systems inn... 316 3e-84 gb|EFV85763.1| binding-protein-dependent transport system inner ... 314 8e-84 >ref|YP_003778102.1| phosphate/phosphonate ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ66194.1| ABC-type phosphate/phosphonate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 261/267 (97%), Positives = 264/267 (98%) Query: 1 MTTSSTSSTPRVSLAFKPQLATRVVIWLIALYAIYAATQLGFSWERFSSGLGNGAKFLGR 60 MTTS+TS T RVSLAF+PQLATRVVIWLIALYAIYAATQLGFSWERFSSGLGNGAKFLGR Sbjct: 1 MTTSNTSPTARVSLAFRPQLATRVVIWLIALYAIYAATQLGFSWERFSSGLGNGAKFLGR 60 Query: 61 MFPPDLSKGDILWGGIKETLQIAVLASLFGILFSLPIGLMGARNLMPSWISWPARALVSV 120 MFPPDLSKGDILWGGIKETLQIAVLASLFGILFSLPIGLMGARNLMPSWISWPARALVSV Sbjct: 61 MFPPDLSKGDILWGGIKETLQIAVLASLFGILFSLPIGLMGARNLMPSWISWPARALVSV 120 Query: 121 CRSLHPVIVAILFVKAVGFGALAGVLALIVASIGFIGKLFAEAIEEISIKQVEAIRATGA 180 CRSLHPVIVAILFVKAVGFGALAGVLALIVASIGFIGKLFAEAIEEISIKQVEAIRATGA Sbjct: 121 CRSLHPVIVAILFVKAVGFGALAGVLALIVASIGFIGKLFAEAIEEISIKQVEAIRATGA 180 Query: 181 SFMNVILFGVLPQVMSRFVGFSTYQLDSNLRNSTMVGIVGAGGVGGVLFSAFQRFDYDFV 240 SFMNVILFGVLPQVMSRFVGFSTYQLDSNLRNSTMVGIVGAGGVGGVLFSAFQRFDYDFV Sbjct: 181 SFMNVILFGVLPQVMSRFVGFSTYQLDSNLRNSTMVGIVGAGGVGGVLFSAFQRFDYDFV 240 Query: 241 LTILITIITIIVVGELLANSVKKVFNV 267 TIL+TIITIIVVGELLANSVKKVFNV Sbjct: 241 FTILVTIITIIVVGELLANSVKKVFNV 267 >ref|NP_887495.1| phosphate/phosphonate ABC transporter permease [Bordetella bronchiseptica RB50] emb|CAE31445.1| binding-protein-dependent transport systems inner membrane component [Bordetella bronchiseptica RB50] Length = 296 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 182/240 (75%), Positives = 209/240 (87%) Query: 26 IWLIALYAIYAATQLGFSWERFSSGLGNGAKFLGRMFPPDLSKGDILWGGIKETLQIAVL 85 + L+ LY YAA QL FSW RF +GLG+ A FL RMFPP+ K D LW GI E+L+IAVL Sbjct: 23 VLLVVLYTFYAAAQLDFSWARFETGLGHAATFLARMFPPNFEKPDTLWKGIAESLEIAVL 82 Query: 86 ASLFGILFSLPIGLMGARNLMPSWISWPARALVSVCRSLHPVIVAILFVKAVGFGALAGV 145 AS+ GIL SLPIGL+GARNLMP+W SWPARALV++CR+LHPVIVAILFVKAVGFGALAG+ Sbjct: 83 ASVLGILLSLPIGLLGARNLMPAWASWPARALVALCRALHPVIVAILFVKAVGFGALAGI 142 Query: 146 LALIVASIGFIGKLFAEAIEEISIKQVEAIRATGASFMNVILFGVLPQVMSRFVGFSTYQ 205 LAL VASIGFIGKLF EAIEEIS+KQVEA+RA+GASF NVI+FGVLPQV +RFVGF+TYQ Sbjct: 143 LALTVASIGFIGKLFTEAIEEISLKQVEAVRASGASFGNVIIFGVLPQVFARFVGFATYQ 202 Query: 206 LDSNLRNSTMVGIVGAGGVGGVLFSAFQRFDYDFVLTILITIITIIVVGELLANSVKKVF 265 DSNLRNSTMVGIVGAGG+GG LFSAFQRFDYDFV IL+T+I II++GE+LA V+KVF Sbjct: 203 FDSNLRNSTMVGIVGAGGIGGTLFSAFQRFDYDFVAAILLTLIAIIMLGEILAGFVRKVF 262 >ref|NP_883180.1| binding-protein-dependent transport systems inner membrane component [Bordetella parapertussis 12822] emb|CAE40261.1| binding-protein-dependent transport systems inner membrane component [Bordetella parapertussis] Length = 299 Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats. Identities = 181/240 (75%), Positives = 209/240 (87%) Query: 26 IWLIALYAIYAATQLGFSWERFSSGLGNGAKFLGRMFPPDLSKGDILWGGIKETLQIAVL 85 + L+ LY YAA QL FSW RF +GLG+ A FL RMFPP+ K D LW GI E+L+IAVL Sbjct: 26 VLLVVLYTFYAAAQLDFSWARFETGLGHAATFLARMFPPNFEKPDTLWKGIAESLEIAVL 85 Query: 86 ASLFGILFSLPIGLMGARNLMPSWISWPARALVSVCRSLHPVIVAILFVKAVGFGALAGV 145 AS+ GIL SLPIGL+GARNLMP+W SWPARALV++CR+LHPVIVAILFVKAVGFGALAG+ Sbjct: 86 ASVLGILLSLPIGLLGARNLMPAWASWPARALVALCRALHPVIVAILFVKAVGFGALAGI 145 Query: 146 LALIVASIGFIGKLFAEAIEEISIKQVEAIRATGASFMNVILFGVLPQVMSRFVGFSTYQ 205 LAL VASIGFIGKLF EAIEEIS+KQV+A+RA+GASF NVI+FGVLPQV +RFVGF+TYQ Sbjct: 146 LALTVASIGFIGKLFTEAIEEISLKQVKAVRASGASFGNVIIFGVLPQVFARFVGFATYQ 205 Query: 206 LDSNLRNSTMVGIVGAGGVGGVLFSAFQRFDYDFVLTILITIITIIVVGELLANSVKKVF 265 DSNLRNSTMVGIVGAGG+GG LFSAFQRFDYDFV IL+T+I II++GE+LA V+KVF Sbjct: 206 FDSNLRNSTMVGIVGAGGIGGTLFSAFQRFDYDFVAAILLTLIAIIMLGEILAGFVRKVF 265 >ref|NP_881998.1| binding-protein-dependent transport systems inner membrane component [Bordetella pertussis Tohama I] emb|CAE43739.1| binding-protein-dependent transport systems inner membrane component [Bordetella pertussis Tohama I] gb|AEE68612.1| binding-protein-dependent transport systems inner membrane component [Bordetella pertussis CS] Length = 299 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 181/240 (75%), Positives = 208/240 (86%) Query: 26 IWLIALYAIYAATQLGFSWERFSSGLGNGAKFLGRMFPPDLSKGDILWGGIKETLQIAVL 85 + L+ LY YAA QL FSW RF +GLG+ A FL RMFPP+ K D LW GI E+L+IAVL Sbjct: 26 VLLVVLYTFYAAAQLDFSWARFETGLGHAATFLARMFPPNFEKPDTLWKGIAESLEIAVL 85 Query: 86 ASLFGILFSLPIGLMGARNLMPSWISWPARALVSVCRSLHPVIVAILFVKAVGFGALAGV 145 AS+ GIL SLPIGL+GARNLMP+W SWPARALV++CR+L PVIVAILFVKAVGFGALAG+ Sbjct: 86 ASVLGILLSLPIGLLGARNLMPAWASWPARALVALCRALRPVIVAILFVKAVGFGALAGI 145 Query: 146 LALIVASIGFIGKLFAEAIEEISIKQVEAIRATGASFMNVILFGVLPQVMSRFVGFSTYQ 205 LAL VASIGFIGKLF EAIEEIS+KQVEA+RA+GASF NVI+FGVLPQV +RFVGF+TYQ Sbjct: 146 LALTVASIGFIGKLFTEAIEEISLKQVEAVRASGASFGNVIIFGVLPQVFARFVGFATYQ 205 Query: 206 LDSNLRNSTMVGIVGAGGVGGVLFSAFQRFDYDFVLTILITIITIIVVGELLANSVKKVF 265 DSNLRNSTMVGIVGAGG+GG LFSAFQRFDYDFV IL+T+I II++GE+LA V+KVF Sbjct: 206 FDSNLRNSTMVGIVGAGGIGGTLFSAFQRFDYDFVAAILLTLIAIIMLGEILAGFVRKVF 265 >gb|EFV85763.1| binding-protein-dependent transport system inner membrane component [Achromobacter xylosoxidans C54] Length = 299 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 183/259 (70%), Positives = 216/259 (83%), Gaps = 2/259 (0%) Query: 9 TPRVSLAFKPQLATRVV--IWLIALYAIYAATQLGFSWERFSSGLGNGAKFLGRMFPPDL 66 TPR S L+ R + L+ LY +YAA QL FSW RF SG+G+ + FL RMFPP+ Sbjct: 2 TPRPSHTRPFALSGRAKAGVLLLVLYTVYAAAQLDFSWARFESGMGHASTFLARMFPPNF 61 Query: 67 SKGDILWGGIKETLQIAVLASLFGILFSLPIGLMGARNLMPSWISWPARALVSVCRSLHP 126 K LW GI E+L+IAVLAS+ GILF+LP+GL+GARNLMP+W+SWPAR+LV++CR+LHP Sbjct: 62 EKPATLWKGIAESLEIAVLASVLGILFALPVGLLGARNLMPAWVSWPARSLVALCRALHP 121 Query: 127 VIVAILFVKAVGFGALAGVLALIVASIGFIGKLFAEAIEEISIKQVEAIRATGASFMNVI 186 VIVAILFVKAVGFGALAG+LAL VASIGFIGKLF EAIEEIS+KQVEA+RATGASF NV+ Sbjct: 122 VIVAILFVKAVGFGALAGILALTVASIGFIGKLFTEAIEEISLKQVEAVRATGASFANVL 181 Query: 187 LFGVLPQVMSRFVGFSTYQLDSNLRNSTMVGIVGAGGVGGVLFSAFQRFDYDFVLTILIT 246 FGVLPQV +RF+GF+TYQ DSNLRNSTMVGIVGAGGVGG LFSAFQRFDYDFV IL+T Sbjct: 182 AFGVLPQVFARFIGFATYQFDSNLRNSTMVGIVGAGGVGGTLFSAFQRFDYDFVSAILLT 241 Query: 247 IITIIVVGELLANSVKKVF 265 +I II++GE+LA V+ VF Sbjct: 242 LIAIIMLGEILAGFVRAVF 260