BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1809.p (534 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778100.1| glycerol-3-phosphate dehydrogenase [Herbaspi... 1018 0.0 ref|ZP_08274030.1| Aerobic glycerol-3-phosphate dehydrogenase [O... 685 0.0 ref|YP_001355299.1| glycerol-3-phosphate dehydrogenase [Janthino... 685 0.0 ref|YP_001101610.1| glycerol-3-phosphate dehydrogenase [Herminii... 676 0.0 ref|NP_899924.1| glycerol-3-phosphate dehydrogenase [Chromobacte... 627 e-177 >ref|YP_003778100.1| glycerol-3-phosphate dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ66192.1| glycerol-3-phosphate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 534 Score = 1018 bits (2631), Expect = 0.0, Method: Composition-based stats. Identities = 520/534 (97%), Positives = 525/534 (98%) Query: 1 MKARGMEGITYPPQYDVLVVGGGINGAGIARDAAGRGLSVALCEQHDLAQHTSSSSSKLI 60 MKARG EGITYPPQYDVLVVGGGINGAGIARDAAGRGLSVALCEQHDLAQHTSSSSSKLI Sbjct: 1 MKARGTEGITYPPQYDVLVVGGGINGAGIARDAAGRGLSVALCEQHDLAQHTSSSSSKLI 60 Query: 61 HGGLRYLEHYEFGLVRKALIEREVLLRSAPHIMWPLRFVMPHDQGQRPAWLIRLGMFLYD 120 HGGLRYLEHYEFGLVRKALIEREVLLRSAPHIMWPLRFVMPHDQGQRPAWLIRLGMFLYD Sbjct: 61 HGGLRYLEHYEFGLVRKALIEREVLLRSAPHIMWPLRFVMPHDQGQRPAWLIRLGMFLYD 120 Query: 121 HLARRELLPGSRALDLRRHVSGAPLKAQFTRGFVYSDGWVDDARLVVLNAMDAAEKGAHI 180 HLARRELLPGSRALDLRRH SGAPLKAQFTRGFVYSDGWVDDARLVVLNAMDAAEKGAHI Sbjct: 121 HLARRELLPGSRALDLRRHASGAPLKAQFTRGFVYSDGWVDDARLVVLNAMDAAEKGAHI 180 Query: 181 MTRTRCESLTRQDNGWQAVLRREDGHAMQVRARCVVNAAGPWVAQFLGGAAHVHSSKSVR 240 MTRTRCESLTRQDNGWQAVLRREDGHAMQVRARCVVNAAGPWVAQFLGGAAHVHSSKSVR Sbjct: 181 MTRTRCESLTRQDNGWQAVLRREDGHAMQVRARCVVNAAGPWVAQFLGGAAHVHSSKSVR 240 Query: 241 LVKGSHIVVPRLFEHDHAYIFQNPDGRIVFAIPYEQDFTLIGTTDIEYQGRVEDVAISED 300 LVKGSHIVVPRLFEHDHAYIFQNPDGRIVFAIPYEQDFTLIGTTDIEYQGRVEDVAIS D Sbjct: 241 LVKGSHIVVPRLFEHDHAYIFQNPDGRIVFAIPYEQDFTLIGTTDIEYQGRVEDVAISAD 300 Query: 301 ETAYLCQLANRYFDKPITPADVVWSYSGVRPLLEDAAADASAVTRDYQLDLNTQGAPLLS 360 ETAYLCQLANRYF+KPITP DVVWSYSGVRPLLEDAAADASAVTRDYQLDLN QGAPLLS Sbjct: 301 ETAYLCQLANRYFEKPITPDDVVWSYSGVRPLLEDAAADASAVTRDYQLDLNLQGAPLLS 360 Query: 361 IFGGKITTFRKLAEEAVDMIAPVLGNQRGAWTEHGCLPGGDLYGAQPSNRSVRQFGHYVE 420 IFGGKITTFRKLAEEAVDMIAPVLGNQRGAWTEHGCLPGGDLYGAQPSNRSVRQF YV+ Sbjct: 361 IFGGKITTFRKLAEEAVDMIAPVLGNQRGAWTEHGCLPGGDLYGAQPSNRSVRQFDQYVQ 420 Query: 421 GLQQQYPWLPAALLQRYARAYGSRTHALLEGRKNLEEMGEEILGGLYAAEVDYLLRHEWA 480 GLQQQYPWLPAALLQRYARAYGSRTH LLEGR+N+EEMGEEIL GLYAAEVDYLLRHEWA Sbjct: 421 GLQQQYPWLPAALLQRYARAYGSRTHTLLEGRQNVEEMGEEILDGLYAAEVDYLLRHEWA 480 Query: 481 TNAADILWRRSKLGLHFPKGSEAVLDAWLAARGGQQSGREQAHEALELAQAASR 534 +NAADILWRRSKLGLHFPKGSEAVLDAWLAARGGQQSGREQAHEALELAQAASR Sbjct: 481 SNAADILWRRSKLGLHFPKGSEAVLDAWLAARGGQQSGREQAHEALELAQAASR 534 >ref|ZP_08274030.1| Aerobic glycerol-3-phosphate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32494.1| Aerobic glycerol-3-phosphate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 516 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 333/488 (68%), Positives = 388/488 (79%), Gaps = 6/488 (1%) Query: 31 RDAAGRGLSVALCEQHDLAQHTSSSSSKLIHGGLRYLEHYEFGLVRKALIEREVLLRSAP 90 RDAAGRGLSV LCE+ DLA HTSS+S+KLIHGGLRYLEHYEF LVRKALIEREVLLRSAP Sbjct: 26 RDAAGRGLSVLLCEKDDLAAHTSSASTKLIHGGLRYLEHYEFNLVRKALIEREVLLRSAP 85 Query: 91 HIMWPLRFVMPHDQGQRPAWLIRLGMFLYDHLARRELLPGSRALDLRRHVSGAPLKAQFT 150 HIMWPLRFVMPHD+GQRPAW+IR+G+FLYD LARRE+LPGS ++LR +G PLK+ FT Sbjct: 86 HIMWPLRFVMPHDRGQRPAWMIRIGLFLYDKLARREMLPGSNGVNLRTDPTGTPLKSTFT 145 Query: 151 RGFVYSDGWVDDARLVVLNAMDAAEKGAHIMTRTRCESLTRQDNGWQAVLRREDGHAMQV 210 RGF+YSDGWVDDARLVVLNA+DAA +GA I T T C S R D W LR E G + V Sbjct: 146 RGFMYSDGWVDDARLVVLNAIDAASRGAQIHTHTTCVSAVRHDKYWAVTLRNEAGDTVVV 205 Query: 211 RARCVVNAAGPWVAQFLGGAAHVHSSKSVRLVKGSHIVVPRLFEHDHAYIFQNPDGRIVF 270 AR ++NAAGPW A FL AAH S+K+VRL+KGSHIVV RLF H HAYIFQ+PDGRIVF Sbjct: 206 HARGLINAAGPWAAHFLQDAAHQPSTKTVRLIKGSHIVVKRLFTHPHAYIFQHPDGRIVF 265 Query: 271 AIPYEQDFTLIGTTDIEYQGRVEDVAISEDETAYLCQLANRYFDKPITPADVVWSYSGVR 330 AIPYE DFTLIGTTD+EY G VAI + E YLC+L +RYF PI PADVVWSYSGVR Sbjct: 266 AIPYEADFTLIGTTDLEYHGDTNQVAIEQHEIDYLCELTSRYFKIPIVPADVVWSYSGVR 325 Query: 331 PLLEDAAADASAVTRDYQLDL------NTQGAPLLSIFGGKITTFRKLAEEAVDMIAPVL 384 PL++DA+A AS VTRDY+L+ T GAP+LS+FGGKITTFRKLAEEAVD+IAP L Sbjct: 326 PLVDDASAAASEVTRDYRLEFDTGADGGTGGAPMLSVFGGKITTFRKLAEEAVDLIAPAL 385 Query: 385 GNQRGAWTEHGCLPGGDLYGAQPSNRSVRQFGHYVEGLQQQYPWLPAALLQRYARAYGSR 444 GN+ +WT CLPGGDLYG P+NR+V +F YV+GLQ++Y WLPA L+ RYARAYG+R Sbjct: 386 GNRTPSWTADACLPGGDLYGPVPANRAVLEFDQYVQGLQKKYAWLPAKLVARYARAYGTR 445 Query: 445 THALLEGRKNLEEMGEEILGGLYAAEVDYLLRHEWATNAADILWRRSKLGLHFPKGSEAV 504 LL + + ++GEEI GLYA EV YL++HEWA+ AADILWRRSKLGLH P + Sbjct: 446 IDLLLADKTGIADLGEEIASGLYATEVHYLMQHEWASCAADILWRRSKLGLHLPADTAER 505 Query: 505 LDAWLAAR 512 LD+W+AA+ Sbjct: 506 LDSWMAAQ 513 >ref|YP_001355299.1| glycerol-3-phosphate dehydrogenase [Janthinobacterium sp. Marseille] gb|ABR89150.1| glycerol-3-phosphate dehydrogenase [Janthinobacterium sp. Marseille] Length = 513 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 342/502 (68%), Positives = 405/502 (80%), Gaps = 6/502 (1%) Query: 14 QYDVLVVGGGINGAGIARDAAGRGLSVALCEQHDLAQHTSSSSSKLIHGGLRYLEHYEFG 73 Q D+L+VGGGINGAGIARDAAGRGLSV LCE+ DLA HTSS+S+KLIHGGLRYLE+YEF Sbjct: 6 QCDILIVGGGINGAGIARDAAGRGLSVVLCEKDDLASHTSSASTKLIHGGLRYLENYEFS 65 Query: 74 LVRKALIEREVLLRSAPHIMWPLRFVMPHDQGQRPAWLIRLGMFLYDHLARRELLPGSRA 133 LVRKALIERE+LLRSAPHIM PLRFVMPHD+GQRPAW+IR G+FLYDHLA+RELLPGS Sbjct: 66 LVRKALIEREILLRSAPHIMHPLRFVMPHDKGQRPAWMIRAGLFLYDHLAKRELLPGSHG 125 Query: 134 LDLRRHVSGAPLKAQFTRGFVYSDGWVDDARLVVLNAMDAAEKGAHIMTRTRCESLTRQD 193 +DLR+H +G PLKA+F++GF YSDGWV+DARLVVLNA+ AAEKGAHI+TRT C ++TR Sbjct: 126 IDLRKHSAGTPLKAEFSKGFAYSDGWVNDARLVVLNAVAAAEKGAHILTRTACVAVTRNA 185 Query: 194 NGWQAVLRREDGHAMQVRARCVVNAAGPWVAQFLGGAAHVHSSKSVRLVKGSHIVVPRLF 253 + WQA LR +D + V+A+ +VNAAGPW A FL H + K +RL+KGSHIVV +LF Sbjct: 186 DDWQATLRNKDSEEILVKAKLLVNAAGPWAASFLHDTVHGRAGKKLRLIKGSHIVVRKLF 245 Query: 254 EHDHAYIFQNPDGRIVFAIPYEQDFTLIGTTDIEYQGRVEDVAISEDETAYLCQLANRYF 313 +H +AYIFQ+PDGRIVFAIPYEQDFTLIGTTDI+Y G + V+I E YLC+L+N YF Sbjct: 246 DHPYAYIFQHPDGRIVFAIPYEQDFTLIGTTDIDYHGDTDKVSIDAAEIDYLCELSNHYF 305 Query: 314 DKPITPADVVWSYSGVRPLLEDAAAD----ASAVTRDYQLDLNTQGAPLLSIFGGKITTF 369 + I P DVVWSYSGVRPL+ED D ASAVTRDY+L +T APLL+IFGGKITTF Sbjct: 306 KQAINPVDVVWSYSGVRPLVEDETDDDNEKASAVTRDYKLTFDTDAAPLLTIFGGKITTF 365 Query: 370 RKLAEEAVDMIAPVLGNQRGAWTEHGCLPGGDLYGAQPSNRSVRQFGHYVEGLQQQYPWL 429 RKLAEEAVD++APVL N GAWT CLPGGD+YGAQ SNR+V +F YV LQ +Y WL Sbjct: 366 RKLAEEAVDLLAPVLDNHHGAWTADACLPGGDIYGAQVSNRAVLEFDDYVRELQLEYAWL 425 Query: 430 PAALLQRYARAYGSRTHALLEGRKNLEEMGEEILGGLYAAEVDYLLRHEWATNAADILWR 489 PAAL++RYA AYG+R LL GR + +MGE I GLYAAEV+YL R+EWAT+ DILWR Sbjct: 426 PAALVERYACAYGTRIKLLLAGRTGIADMGEAIAPGLYAAEVEYLTRYEWATSTEDILWR 485 Query: 490 RSKLGLHFPKGSEA--VLDAWL 509 RSKLGLH + +E+ L+ WL Sbjct: 486 RSKLGLHLAQTNESRRKLNHWL 507 >ref|YP_001101610.1| glycerol-3-phosphate dehydrogenase [Herminiimonas arsenicoxydans] emb|CAL63489.1| Aerobic glycerol-3-phosphate dehydrogenase [Herminiimonas arsenicoxydans] Length = 511 Score = 676 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 335/504 (66%), Positives = 397/504 (78%), Gaps = 4/504 (0%) Query: 16 DVLVVGGGINGAGIARDAAGRGLSVALCEQHDLAQHTSSSSSKLIHGGLRYLEHYEFGLV 75 D+L+VGGGINGAGIARDAAGRGLSV LCE+ DLA HTSS+S+KLIHGGLRYLE Y+FGLV Sbjct: 8 DILIVGGGINGAGIARDAAGRGLSVVLCEKDDLASHTSSASTKLIHGGLRYLEQYDFGLV 67 Query: 76 RKALIEREVLLRSAPHIMWPLRFVMPHDQGQRPAWLIRLGMFLYDHLARRELLPGSRALD 135 RKALIERE+LLRSAPHI+ PLRFVMP D+GQRPAW+IR GMF+YDHLARRELLPGS+ +D Sbjct: 68 RKALIEREILLRSAPHIIRPLRFVMPQDKGQRPAWMIRAGMFIYDHLARRELLPGSQGID 127 Query: 136 LRRHVSGAPLKAQFTRGFVYSDGWVDDARLVVLNAMDAAEKGAHIMTRTRCESLTRQDNG 195 LR+H +G PLK FT+GF YSDGWVDDARLVVLNA+ A E GA I+TRT C ++ R + Sbjct: 128 LRKHAAGTPLKDCFTKGFAYSDGWVDDARLVVLNAIAARENGATILTRTACIAVQRTGDQ 187 Query: 196 WQAVLRREDGHAMQVRARCVVNAAGPWVAQFLGGAAHVHSSKSVRLVKGSHIVVPRLFEH 255 W A LR D ++V AR +VNA GPW A+FL H + K +RL+KGSHIVV +LF+H Sbjct: 188 WNATLRNADNATIEVNARLLVNATGPWAAEFLHDTVHGRAGKKLRLIKGSHIVVKKLFDH 247 Query: 256 DHAYIFQNPDGRIVFAIPYEQDFTLIGTTDIEYQGRVEDVAISEDETAYLCQLANRYFDK 315 AYIFQ+PDGRIVFAIPYE D+TLIGTTDI+Y G + VAI E YLC+L N YF + Sbjct: 248 PCAYIFQHPDGRIVFAIPYEHDYTLIGTTDIDYHGDTDTVAIDATEINYLCELVNHYFAR 307 Query: 316 PITPADVVWSYSGVRPLLED----AAADASAVTRDYQLDLNTQGAPLLSIFGGKITTFRK 371 PITPADVVWSYSGVRPL+ED + AS VTRDY+L +T APLLS+FGGKITTFRK Sbjct: 308 PITPADVVWSYSGVRPLVEDDKVNESESASEVTRDYKLAFDTDAAPLLSVFGGKITTFRK 367 Query: 372 LAEEAVDMIAPVLGNQRGAWTEHGCLPGGDLYGAQPSNRSVRQFGHYVEGLQQQYPWLPA 431 LAEEA+D+IAPVLGN GAWT CLPGGD++GA+P+NR+V +F +V +QQQY WLPA Sbjct: 368 LAEEALDLIAPVLGNHHGAWTAESCLPGGDIFGAKPNNRAVLEFDRFVREMQQQYAWLPA 427 Query: 432 ALLQRYARAYGSRTHALLEGRKNLEEMGEEILGGLYAAEVDYLLRHEWATNAADILWRRS 491 ALL+RYARAYG+R LL R L MG+EI GL+ AEV+YL R+EWAT A DILWRR+ Sbjct: 428 ALLERYARAYGTRLMLLLADRSGLAAMGKEITPGLFVAEVEYLQRYEWATCAGDILWRRT 487 Query: 492 KLGLHFPKGSEAVLDAWLAARGGQ 515 K GLH +E L+AW+ G+ Sbjct: 488 KCGLHSTGAAEHELEAWMNRSTGR 511 >ref|NP_899924.1| glycerol-3-phosphate dehydrogenase [Chromobacterium violaceum ATCC 12472] gb|AAQ57933.1| glycerol-3-phosphate dehydrogenase [Chromobacterium violaceum ATCC 12472] Length = 503 Score = 627 bits (1617), Expect = e-177, Method: Composition-based stats. Identities = 326/506 (64%), Positives = 390/506 (77%), Gaps = 10/506 (1%) Query: 15 YDVLVVGGGINGAGIARDAAGRGLSVALCEQHDLAQHTSSSSSKLIHGGLRYLEHYEFGL 74 YD++++GGGINGAGIARDAAGRGLSV LCE+ DLA HTSS+S+KLIHGGLRYLE+YEFGL Sbjct: 4 YDLVIIGGGINGAGIARDAAGRGLSVLLCEKDDLASHTSSASTKLIHGGLRYLEYYEFGL 63 Query: 75 VRKALIEREVLLRSAPHIMWPLRFVMPHDQGQRPAWLIRLGMFLYDHLARRELLPGSRAL 134 VRKAL EREVLL++APHI+WPLRFVMPH + QRP W+IR G+FLYDHLA+RE+LPGS + Sbjct: 64 VRKALQEREVLLKAAPHIIWPLRFVMPHARDQRPEWMIRAGLFLYDHLAKREVLPGSETV 123 Query: 135 DLRRHVSGAPLKAQFTRGFVYSDGWVDDARLVVLNAMDAAEKGAHIMTRTRCESLTRQDN 194 RH SGAPLK F RGFVYSDGWV DARLVVLNAMDAAE GA I RT C + R Sbjct: 124 SFARHPSGAPLKDAFKRGFVYSDGWVQDARLVVLNAMDAAEHGAKIHVRTACVAARRDGE 183 Query: 195 GWQAVLRREDGHAMQVRARCVVNAAGPWVAQFLGGAAHVHSSKSVRLVKGSHIVVPRLFE 254 W A L REDG +VRAR +VNAAGPWV + + SSKS+RLVKGSHIVV ++F+ Sbjct: 184 HWLATLEREDGSRFEVRARALVNAAGPWVQSLIEDKLAMPSSKSIRLVKGSHIVVKKIFD 243 Query: 255 HDHAYIFQNPDGRIVFAIPYEQDFTLIGTTDIEYQGRVEDVAISEDETAYLCQLANRYFD 314 H AYIFQNPD RI+FAIPYE+DFTLIGTTD+EY G VAI DE YLC+++NRYF Sbjct: 244 HPFAYIFQNPDKRIIFAIPYEKDFTLIGTTDVEYHGDPAQVAIDGDEINYLCEMSNRYFH 303 Query: 315 KPITPADVVWSYSGVRPLLEDAAADASAVTRDYQLDLNTQGAPLLSIFGGKITTFRKLAE 374 ITPADV+ +YSGVRPLL+DA+ +AS+VTRDY L+++ +GAPLLS+FGGKITTFRKLAE Sbjct: 304 SQITPADVLSTYSGVRPLLDDASDNASSVTRDYALEMDLKGAPLLSVFGGKITTFRKLAE 363 Query: 375 EAVDMIAPVLGNQRGAWTEHGCLPGGDLYGAQPSNRSVRQFGHYVEGLQQQYPWLPAALL 434 EAVD IAP+LG + WT LPGGD+ GA FG +++GL+Q++PWLP AL Sbjct: 364 EAVDKIAPLLGCGQATWTAGAPLPGGDMPGA--------DFGRFLQGLRQRHPWLPEALA 415 Query: 435 QRYARAYGSRTHALLEGRKNLEEMGEEILGGLYAAEVDYLLRHEWATNAADILWRRSKLG 494 +R+ARAYG+R L+ +L +G+E+L GLY AE+ YL EWAT + DILWRRSKL Sbjct: 416 ERWARAYGTRVGKLIGKADSLAGLGKEVLPGLYEAELAYLADAEWATRSEDILWRRSKLK 475 Query: 495 LHFPKGSEAVLDAWLAARGGQQSGRE 520 LH P + V+DAWLAAR Q RE Sbjct: 476 LHLPANAAEVVDAWLAARA--QPPRE 499