BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1806.p (264 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778097.1| urease accessory UreF protein [Herbaspirillu... 388 e-106 ref|YP_004753505.1| urease accessory protein [Collimonas fungivo... 300 1e-79 ref|ZP_08276129.1| Urease accessory protein UreF [Oxalobacterace... 293 2e-77 gb|AAN76659.2|AF411008_5 UreF [Nitrosospira sp. NpAV] 283 2e-74 ref|YP_001353506.1| urease accessory protein UreF [Janthinobacte... 283 3e-74 >ref|YP_003778097.1| urease accessory UreF protein [Herbaspirillum seropedicae SmR1] gb|ADJ66189.1| urease accessory UreF protein [Herbaspirillum seropedicae SmR1] Length = 226 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 216/226 (95%), Positives = 219/226 (96%) Query: 39 MQAAALLHLLQLSSPSLPIGAYSYSQGLEAAIECGRVGSEATARAWIGHALHEVVARFEA 98 MQA+ALLHLLQLSSPSLPIGAYSYSQGLEAAIE GRV SEATAR WIGHALHEVVARFEA Sbjct: 1 MQASALLHLLQLSSPSLPIGAYSYSQGLEAAIENGRVSSEATARNWIGHALHEVVARFEA 60 Query: 99 PIFARLVAAFEARDAEKVTLWTERFIAARDTSEFRAETIQMGYSLGKLATDLKLGDEALL 158 PIFARLVAAFEARDAEKV+LWTERFIAARDTSEFRAETIQMGYSLGKL TDLKLGD LL Sbjct: 61 PIFARLVAAFEARDAEKVSLWTERFIAARDTSEFRAETIQMGYSLGKLVTDLKLGDATLL 120 Query: 159 AILQAQPELPLPTSLAFATVSLQVPREAAVLGMLFAWAENQVLACVKTVPLGQVAGQRIL 218 AILQ QPELPLPTSLAFATV+LQVPREAAVLGMLFAWAENQVLACVKTVPLGQVAGQRIL Sbjct: 121 AILQGQPELPLPTSLAFATVALQVPREAAVLGMLFAWAENQVLACVKTVPLGQVAGQRIL 180 Query: 219 LSLQPELEKAAATALTLEDDELCNWAPGLSLLSMQHEVQYSRIYRS 264 LSLQPELEKAAATALTLEDDELCNWAPGLSLLSMQHEVQYSRIYRS Sbjct: 181 LSLQPELEKAAATALTLEDDELCNWAPGLSLLSMQHEVQYSRIYRS 226 >ref|YP_004753505.1| urease accessory protein [Collimonas fungivorans Ter331] gb|AEK62682.1| Urease accessory protein [Collimonas fungivorans Ter331] Length = 226 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 166/226 (73%), Positives = 189/226 (83%) Query: 39 MQAAALLHLLQLSSPSLPIGAYSYSQGLEAAIECGRVGSEATARAWIGHALHEVVARFEA 98 M A ALLHLLQL+SPSLPIGAYSYSQGLE AI+ G V +AR WI + L ++VA FEA Sbjct: 1 MNATALLHLLQLASPSLPIGAYSYSQGLETAIDKGWVKDPESARGWICNNLQQIVALFEA 60 Query: 99 PIFARLVAAFEARDAEKVTLWTERFIAARDTSEFRAETIQMGYSLGKLATDLKLGDEALL 158 P+ RL+ AFE+RD V LWTERFIAARDT+EFRAETIQMGYSLGKLA +L++GD ALL Sbjct: 61 PVLWRLLQAFESRDGAAVALWTERFIAARDTAEFRAETIQMGYSLGKLAIELQVGDAALL 120 Query: 159 AILQAQPELPLPTSLAFATVSLQVPREAAVLGMLFAWAENQVLACVKTVPLGQVAGQRIL 218 AILQAQPELPLPT+ A+A V+LQVP EAA+LGMLF+WAENQVL CVK++PLGQVAGQR+L Sbjct: 121 AILQAQPELPLPTAYAYAAVALQVPHEAALLGMLFSWAENQVLVCVKSIPLGQVAGQRLL 180 Query: 219 LSLQPELEKAAATALTLEDDELCNWAPGLSLLSMQHEVQYSRIYRS 264 LSLQ EL+ AA A L D EL NWAPGLSLLSMQHE QYSR+YRS Sbjct: 181 LSLQAELQLAAQQAQELADHELSNWAPGLSLLSMQHEEQYSRLYRS 226 >ref|ZP_08276129.1| Urease accessory protein UreF [Oxalobacteraceae bacterium IMCC9480] gb|EGF30405.1| Urease accessory protein UreF [Oxalobacteraceae bacterium IMCC9480] Length = 226 Score = 293 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 163/226 (72%), Positives = 191/226 (84%) Query: 39 MQAAALLHLLQLSSPSLPIGAYSYSQGLEAAIECGRVGSEATARAWIGHALHEVVARFEA 98 M A ALLHLLQL+SPSLPIGAYSYSQGLEAA+E G V A+ARAWI LH+VVARFEA Sbjct: 1 MHATALLHLLQLASPSLPIGAYSYSQGLEAAMESGLVTDAASARAWIVDTLHQVVARFEA 60 Query: 99 PIFARLVAAFEARDAEKVTLWTERFIAARDTSEFRAETIQMGYSLGKLATDLKLGDEALL 158 P+ RL+ AF ARD V WTE+FIAARDT+EFRAETIQMGYSLGKL TDL++ D LL Sbjct: 61 PVLWRLLQAFSARDEIAVASWTEQFIAARDTAEFRAETIQMGYSLGKLMTDLQIDDGGLL 120 Query: 159 AILQAQPELPLPTSLAFATVSLQVPREAAVLGMLFAWAENQVLACVKTVPLGQVAGQRIL 218 A+LQAQ E+PLPT+ A+A V+L VP +AA+LGMLF+WAENQVL CVK+VPLGQVAGQR+L Sbjct: 121 ALLQAQAEIPLPTAYAYAAVALNVPADAALLGMLFSWAENQVLVCVKSVPLGQVAGQRLL 180 Query: 219 LSLQPELEKAAATALTLEDDELCNWAPGLSLLSMQHEVQYSRIYRS 264 LSLQPEL AA +A TL D+++ +W+PGLSLLSM+HEVQYSR+YRS Sbjct: 181 LSLQPELALAAESASTLADEDMSSWSPGLSLLSMRHEVQYSRLYRS 226 >gb|AAN76659.2|AF411008_5 UreF [Nitrosospira sp. NpAV] Length = 227 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 159/226 (70%), Positives = 184/226 (81%), Gaps = 1/226 (0%) Query: 39 MQAAALLHLLQLSSPSLPIGAYSYSQGLEAAIECGRVGSEATARAWIGHALHEVVARFEA 98 M + ALL LLQL+SPSLPIGAY+YSQGLEAAIE G V E +ARAWI +L VVA FEA Sbjct: 3 MHSTALLRLLQLASPSLPIGAYTYSQGLEAAIEAGMVKDEGSARAWITESLG-VVADFEA 61 Query: 99 PIFARLVAAFEARDAEKVTLWTERFIAARDTSEFRAETIQMGYSLGKLATDLKLGDEALL 158 P+ RL+ AF ARD VT WTE F+AARDT+EFRAETIQMGYSLGKL +LK+ D++LL Sbjct: 62 PVLWRLLKAFSARDEAAVTRWTECFVAARDTAEFRAETIQMGYSLGKLVIELKIADDSLL 121 Query: 159 AILQAQPELPLPTSLAFATVSLQVPREAAVLGMLFAWAENQVLACVKTVPLGQVAGQRIL 218 IL +QPE+PLPT+ A A +L VP EAA+L +LF+ ENQVLACVK++PLGQV+GQR+L Sbjct: 122 NILSSQPEIPLPTAFACAAEALAVPHEAALLALLFSMIENQVLACVKSIPLGQVSGQRLL 181 Query: 219 LSLQPELEKAAATALTLEDDELCNWAPGLSLLSMQHEVQYSRIYRS 264 LSL P LE AA+ A LEDDELCNWAPGLSLLSMQHEVQYSRIYRS Sbjct: 182 LSLHPALEAAASHAQRLEDDELCNWAPGLSLLSMQHEVQYSRIYRS 227 >ref|YP_001353506.1| urease accessory protein UreF [Janthinobacterium sp. Marseille] sp|A6SZ09|UREF_JANMA RecName: Full=Urease accessory protein ureF gb|ABR90010.1| urease accessory protein UreF [Janthinobacterium sp. Marseille] Length = 226 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 156/208 (75%), Positives = 175/208 (84%) Query: 57 IGAYSYSQGLEAAIECGRVGSEATARAWIGHALHEVVARFEAPIFARLVAAFEARDAEKV 116 IGAYSYSQGLEAAIE G V E AR WI LHEVVARFEAP+ RL+ AFE RDA V Sbjct: 19 IGAYSYSQGLEAAIENGTVKDEVGARRWIIDVLHEVVARFEAPVLWRLLQAFETRDAAAV 78 Query: 117 TLWTERFIAARDTSEFRAETIQMGYSLGKLATDLKLGDEALLAILQAQPELPLPTSLAFA 176 WTERFIAARDT+EFRAETIQMGYSLGKL +DL+LGD +LA+LQAQ E+PLPT+LA+A Sbjct: 79 ESWTERFIAARDTAEFRAETIQMGYSLGKLCSDLQLGDAEMLALLQAQTEVPLPTALAYA 138 Query: 177 TVSLQVPREAAVLGMLFAWAENQVLACVKTVPLGQVAGQRILLSLQPELEKAAATALTLE 236 V+L+VP EAA+LGMLF+WAENQVL CVK+VPLGQVAGQR+LLSLQ ELE AA A L Sbjct: 139 AVTLKVPAEAALLGMLFSWAENQVLVCVKSVPLGQVAGQRLLLSLQAELEVAAQVAQQLP 198 Query: 237 DDELCNWAPGLSLLSMQHEVQYSRIYRS 264 D+EL NW+PGLSLLSMQHEVQYSR+YRS Sbjct: 199 DEELSNWSPGLSLLSMQHEVQYSRLYRS 226