BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1800.p         (232 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003778091.1| urea ABC transporter ATPase [Herbaspirillum ...   431   e-119
ref|YP_001353500.1| ABC-type branched-chain amino acid transport...   401   e-110
ref|YP_004753499.1| urea ABC transporter ATPase protein [Collimo...   370   e-100
ref|ZP_06689562.1| branched-chain amino acid ABC superfamily ATP...   358   3e-97
gb|EFV85587.1| branched-chain ABC transporter [Achromobacter xyl...   355   3e-96

>ref|YP_003778091.1| urea ABC transporter ATPase [Herbaspirillum seropedicae SmR1]
 gb|ADJ66183.1| ABC-type urea transport system, ATPase component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 232

 Score =  431 bits (1107), Expect = e-119,   Method: Composition-based stats.
 Identities = 228/232 (98%), Positives = 230/232 (99%)

Query: 1   MLQVNELNQYYGAAHTLRGVSLDVQKGKVLSLLGRNGVGKTTLLKCLMGVLPVAKGNVSF 60
           MLQVNELNQYYGAAHTLRGVSLDVQKGKVLSLLGRNGVGKTTLLKCLMGVLPVAKGNV F
Sbjct: 1   MLQVNELNQYYGAAHTLRGVSLDVQKGKVLSLLGRNGVGKTTLLKCLMGVLPVAKGNVMF 60

Query: 61  EGQDITRLKPHQRAKLGIAYVPQGREIFARLTVEENMLMGMATLSGRRASTIKGEVYELF 120
           EG DIT+LKPHQRAKLGIAYVPQGREIFARLTVEENMLMGMATLSGRRAS+IKGEVYELF
Sbjct: 61  EGHDITKLKPHQRAKLGIAYVPQGREIFARLTVEENMLMGMATLSGRRASSIKGEVYELF 120

Query: 121 PVLKEMLHRRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVISLLR 180
           PVLKEMLHRRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVISLLR
Sbjct: 121 PVLKEMLHRRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVISLLR 180

Query: 181 QRGDIGILLCEQYFDFARELADTFVVMSRGEVVAAGTQDQMDGEDVKKHLAV 232
           QRGDIGILLCEQYFDFARELADTFVVMSRGEVVAAGTQDQMDGEDVKKHLAV
Sbjct: 181 QRGDIGILLCEQYFDFARELADTFVVMSRGEVVAAGTQDQMDGEDVKKHLAV 232


>ref|YP_001353500.1| ABC-type branched-chain amino acid transport system ATP-binding
           protein [Janthinobacterium sp. Marseille]
 gb|ABR89224.1| ABC-type branched-chain amino acid transport system ATP-binding
           protein [Janthinobacterium sp. Marseille]
          Length = 232

 Score =  401 bits (1030), Expect = e-110,   Method: Composition-based stats.
 Identities = 207/232 (89%), Positives = 223/232 (96%)

Query: 1   MLQVNELNQYYGAAHTLRGVSLDVQKGKVLSLLGRNGVGKTTLLKCLMGVLPVAKGNVSF 60
           MLQVN+LNQYYGAAHTLRG+SL V+KGK LSLLGRNGVGKTTLLKCLMGVLPVA GNVS 
Sbjct: 1   MLQVNQLNQYYGAAHTLRGISLSVEKGKCLSLLGRNGVGKTTLLKCLMGVLPVAAGNVSL 60

Query: 61  EGQDITRLKPHQRAKLGIAYVPQGREIFARLTVEENMLMGMATLSGRRASTIKGEVYELF 120
           +G+DIT+LKPHQRA LGIAYVPQGREIFARLTVEEN+LMGMAT SG++AS IKGEVYELF
Sbjct: 61  DGRDITKLKPHQRAALGIAYVPQGREIFARLTVEENLLMGMATKSGKKASVIKGEVYELF 120

Query: 121 PVLKEMLHRRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVISLLR 180
           PVLKEMLHRRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVISLLR
Sbjct: 121 PVLKEMLHRRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVISLLR 180

Query: 181 QRGDIGILLCEQYFDFARELADTFVVMSRGEVVAAGTQDQMDGEDVKKHLAV 232
           +RGDIGILLCEQYFDFARELADTFVV+SRGEVVA+G+Q +MD ++VKKHLAV
Sbjct: 181 ERGDIGILLCEQYFDFARELADTFVVLSRGEVVASGSQQEMDDDNVKKHLAV 232


>ref|YP_004753499.1| urea ABC transporter ATPase protein [Collimonas fungivorans Ter331]
 gb|AEK62676.1| Urea ABC transporter, ATPase protein [Collimonas fungivorans
           Ter331]
          Length = 232

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 192/232 (82%), Positives = 211/232 (90%)

Query: 1   MLQVNELNQYYGAAHTLRGVSLDVQKGKVLSLLGRNGVGKTTLLKCLMGVLPVAKGNVSF 60
           ML V +LNQYYG++HTLRGVSL ++KGK L+LLGRNGVGKTTLLKCLMGVLP A G V+ 
Sbjct: 1   MLNVEQLNQYYGSSHTLRGVSLSLEKGKCLALLGRNGVGKTTLLKCLMGVLPSASGKVTL 60

Query: 61  EGQDITRLKPHQRAKLGIAYVPQGREIFARLTVEENMLMGMATLSGRRASTIKGEVYELF 120
           EG+DIT LKPHQRA LGIAYVPQGREIFARL+VEEN+LMGMAT SG++A  IK EVYELF
Sbjct: 61  EGRDITSLKPHQRAALGIAYVPQGREIFARLSVEENLLMGMATKSGKKALLIKDEVYELF 120

Query: 121 PVLKEMLHRRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVISLLR 180
           PVLKEML RRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVI LLR
Sbjct: 121 PVLKEMLQRRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVIRLLR 180

Query: 181 QRGDIGILLCEQYFDFARELADTFVVMSRGEVVAAGTQDQMDGEDVKKHLAV 232
           +RGDIGILLCEQYF FAR+LAD FVV+SRGEVVAAG+Q+ MD + VK+HLAV
Sbjct: 181 ERGDIGILLCEQYFHFARDLADNFVVLSRGEVVAAGSQESMDDDSVKRHLAV 232


>ref|ZP_06689562.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, ABC protein [Achromobacter piechaudii ATCC
           43553]
 gb|EFF73453.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, ABC protein [Achromobacter piechaudii ATCC
           43553]
          Length = 233

 Score =  358 bits (920), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 182/232 (78%), Positives = 206/232 (88%)

Query: 1   MLQVNELNQYYGAAHTLRGVSLDVQKGKVLSLLGRNGVGKTTLLKCLMGVLPVAKGNVSF 60
           ML +N +NQYYG +HTLRGVSL V++G+ L+LLGRNGVGKTTLLKCLMGVLPVA GN++F
Sbjct: 2   MLDINAINQYYGGSHTLRGVSLSVRQGECLALLGRNGVGKTTLLKCLMGVLPVASGNIAF 61

Query: 61  EGQDITRLKPHQRAKLGIAYVPQGREIFARLTVEENMLMGMATLSGRRASTIKGEVYELF 120
           +G DITRL PHQRA  G+AYVPQGR+IFARLTV+EN+LMGMAT    RA  IK EV+ELF
Sbjct: 62  DGADITRLAPHQRAARGMAYVPQGRDIFARLTVQENILMGMATQPAARARRIKEEVFELF 121

Query: 121 PVLKEMLHRRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVISLLR 180
           PVLK ML RRGGDLSGGQQQQLAIARAL+AEPKLIILDEPTEGIQPSIIKDI RVI +LR
Sbjct: 122 PVLKSMLSRRGGDLSGGQQQQLAIARALVAEPKLIILDEPTEGIQPSIIKDIARVIHMLR 181

Query: 181 QRGDIGILLCEQYFDFARELADTFVVMSRGEVVAAGTQDQMDGEDVKKHLAV 232
           QRGDI ILLCEQYFDFARELAD FVV+SRGEVVA+G +  +DGEDV++HL+V
Sbjct: 182 QRGDIAILLCEQYFDFARELADHFVVLSRGEVVASGDRTAIDGEDVRRHLSV 233


>gb|EFV85587.1| branched-chain ABC transporter [Achromobacter xylosoxidans C54]
          Length = 232

 Score =  355 bits (911), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 181/232 (78%), Positives = 205/232 (88%)

Query: 1   MLQVNELNQYYGAAHTLRGVSLDVQKGKVLSLLGRNGVGKTTLLKCLMGVLPVAKGNVSF 60
           ML VN ++QYYG +HTLRGVSL V +G+ L+LLGRNGVGKTTLLKC+MGVLPVA+G + F
Sbjct: 1   MLNVNTIDQYYGGSHTLRGVSLAVNQGECLALLGRNGVGKTTLLKCVMGVLPVARGAIDF 60

Query: 61  EGQDITRLKPHQRAKLGIAYVPQGREIFARLTVEENMLMGMATLSGRRASTIKGEVYELF 120
           +G D+TRL PHQRA  G+AYVPQGR+IFARLTVEEN+LMGMAT    RA  IK EV+ELF
Sbjct: 61  DGADVTRLAPHQRAARGMAYVPQGRDIFARLTVEENILMGMATKPAARARRIKEEVFELF 120

Query: 121 PVLKEMLHRRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVISLLR 180
           PVLK ML RRGGDLSGGQQQQLAIARAL+AEPKLIILDEPTEGIQPSIIKDIGRVI +LR
Sbjct: 121 PVLKSMLARRGGDLSGGQQQQLAIARALVAEPKLIILDEPTEGIQPSIIKDIGRVIHMLR 180

Query: 181 QRGDIGILLCEQYFDFARELADTFVVMSRGEVVAAGTQDQMDGEDVKKHLAV 232
           QRGDI ILLCEQYFDFARELAD FVV+SRGEVVA+G +  +DGEDV++HL+V
Sbjct: 181 QRGDIAILLCEQYFDFARELADRFVVLSRGEVVASGDRAAIDGEDVRRHLSV 232