BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1795.p (275 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778086.1| hypothetical protein Hsero_4712 [Herbaspiril... 496 e-138 ref|YP_002945061.1| hypothetical protein Vapar_3177 [Variovorax ... 373 e-101 ref|YP_004155895.1| hypothetical protein Varpa_3600 [Variovorax ... 372 e-101 ref|YP_004751855.1| hypothetical protein CFU_1200 [Collimonas fu... 340 2e-91 ref|YP_001856663.1| hypothetical protein Bphy_0424 [Burkholderia... 298 7e-79 >ref|YP_003778086.1| hypothetical protein Hsero_4712 [Herbaspirillum seropedicae SmR1] gb|ADJ66178.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 275 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 256/275 (93%), Positives = 264/275 (96%) Query: 1 MNPSRQEKKHWTIDDIDLSRIDRERVRQDEDLFYLVACASFVESGSDLYTHNLVEFYKGD 60 M+ SRQEK+HWTI+DID SRID RVRQDEDLFYLVACASFVESGSDLYTHNLVE+YKGD Sbjct: 1 MSSSRQEKQHWTIEDIDFSRIDLARVRQDEDLFYLVACASFVESGSDLYTHNLVEYYKGD 60 Query: 61 AEVETWLREQWEPEELQHGAALRAYVEHVWPEFDWPRAYQGFLDEYSQYCKVELLEPTRA 120 AEVETWLREQWE EELQHGAALRAYVEHVWPEFDW RAYQGFLDEYSQYCKVELLEPTRA Sbjct: 61 AEVETWLREQWEQEELQHGAALRAYVEHVWPEFDWQRAYQGFLDEYSQYCKVELLEPTRA 120 Query: 121 QELAARCVVETGTSTYYRALARATDEPVLKHLAGLIANDEVNHYKHFYQYFRRYRRQENI 180 QELAARCVVETGTSTYYRALARATDEPVLK LAGLIANDEVNHYKHFY YFRRYRR+ENI Sbjct: 121 QELAARCVVETGTSTYYRALARATDEPVLKQLAGLIANDEVNHYKHFYHYFRRYRREENI 180 Query: 181 GRSRVFGTLSRRTLELKSEDADCAIRHVVMVYKPELAADPARVKELASRMSRTVRVNLKP 240 GRSRVFGTLSRRTLELK+EDADCAIRHV MVYKPELAADPAR+KELASRMSRTVRVNLKP Sbjct: 181 GRSRVFGTLSRRTLELKNEDADCAIRHVAMVYKPELAADPARLKELASRMSRTVRVNLKP 240 Query: 241 ETTIKMIMRPLELPVTLQNMIEFPLRQFMQRVLLR 275 ETTIKMIMRPLELP+ LQNMIEFPLRQFMQ VLLR Sbjct: 241 ETTIKMIMRPLELPIRLQNMIEFPLRQFMQHVLLR 275 >ref|YP_002945061.1| hypothetical protein Vapar_3177 [Variovorax paradoxus S110] gb|ACS19795.1| conserved hypothetical protein [Variovorax paradoxus S110] Length = 273 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 181/270 (67%), Positives = 218/270 (80%) Query: 6 QEKKHWTIDDIDLSRIDRERVRQDEDLFYLVACASFVESGSDLYTHNLVEFYKGDAEVET 65 E HW I+D+D SRI R VR+DE+LFYLVACASFVESGSDLYT NLV+F++GD EV Sbjct: 4 HEAAHWKIEDLDFSRIARPEVRRDENLFYLVACASFVESGSDLYTQNLVDFFRGDDEVTA 63 Query: 66 WLREQWEPEELQHGAALRAYVEHVWPEFDWPRAYQGFLDEYSQYCKVELLEPTRAQELAA 125 WL QWE EELQHG ALRAYV HVWPEFDW AY+ FL+EY+ YCKVELL PTR ELAA Sbjct: 64 WLTHQWEAEELQHGRALRAYVSHVWPEFDWEGAYRSFLEEYATYCKVELLAPTRGLELAA 123 Query: 126 RCVVETGTSTYYRALARATDEPVLKHLAGLIANDEVNHYKHFYQYFRRYRRQENIGRSRV 185 RCV+ETGT++YYR LAR+T EPVL+ LA IA DEV+HYKHFY++FRRYR+QE +GR RV Sbjct: 124 RCVIETGTASYYRTLARSTTEPVLRDLASRIAADEVSHYKHFYRFFRRYRQQEGLGRFRV 183 Query: 186 FGTLSRRTLELKSEDADCAIRHVVMVYKPELAADPARVKELASRMSRTVRVNLKPETTIK 245 GT+ RRTLELKSEDADCAIRHVV P AAD A +++L++RM+ TVR +L P T+K Sbjct: 184 LGTIGRRTLELKSEDADCAIRHVVRARSPGRAADTAYIQQLSARMNSTVRTHLSPGATLK 243 Query: 246 MIMRPLELPVTLQNMIEFPLRQFMQRVLLR 275 M+MRPLELP +Q ++++P+RQFM+ V LR Sbjct: 244 MLMRPLELPAGVQAVVQYPIRQFMEHVFLR 273 >ref|YP_004155895.1| hypothetical protein Varpa_3600 [Variovorax paradoxus EPS] gb|ADU37784.1| hypothetical protein Varpa_3600 [Variovorax paradoxus EPS] Length = 273 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 181/269 (67%), Positives = 217/269 (80%) Query: 7 EKKHWTIDDIDLSRIDRERVRQDEDLFYLVACASFVESGSDLYTHNLVEFYKGDAEVETW 66 E +HW I+D+D SRI ++VR DE+LFYLV ASF+ESGSDLYTHNLV+F++GD EV W Sbjct: 5 EAEHWKIEDLDFSRIALDKVRPDENLFYLVTSASFIESGSDLYTHNLVDFFRGDDEVTDW 64 Query: 67 LREQWEPEELQHGAALRAYVEHVWPEFDWPRAYQGFLDEYSQYCKVELLEPTRAQELAAR 126 L WEPEELQHG ALRAYV HVWPEF+W AY+GFL+EY+ YCKVELL PTRA E+ AR Sbjct: 65 LSNYWEPEELQHGQALRAYVRHVWPEFEWDTAYRGFLEEYASYCKVELLGPTRALEMTAR 124 Query: 127 CVVETGTSTYYRALARATDEPVLKHLAGLIANDEVNHYKHFYQYFRRYRRQENIGRSRVF 186 CVVETGT+TYYRA+ARATDEPVL LA IA DEVNHYKHFY++FRRYR QE + R RV Sbjct: 125 CVVETGTATYYRAMARATDEPVLSDLATRIATDEVNHYKHFYRFFRRYREQEKLSRFRVI 184 Query: 187 GTLSRRTLELKSEDADCAIRHVVMVYKPELAADPARVKELASRMSRTVRVNLKPETTIKM 246 GT+ RRTLELKSEDADCAIRHVV P A D A V++L++RM+ T+R NL +T+KM Sbjct: 185 GTIGRRTLELKSEDADCAIRHVVKARSPHRADDTAYVQQLSARMNSTIRTNLSAGSTLKM 244 Query: 247 IMRPLELPVTLQNMIEFPLRQFMQRVLLR 275 +MRPLELP +Q +I++P++QFMQ V LR Sbjct: 245 LMRPLELPARVQTVIQYPIKQFMQHVFLR 273 >ref|YP_004751855.1| hypothetical protein CFU_1200 [Collimonas fungivorans Ter331] gb|AEK61032.1| hypothetical protein CFU_1200 [Collimonas fungivorans Ter331] Length = 280 Score = 340 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 168/275 (61%), Positives = 217/275 (78%) Query: 1 MNPSRQEKKHWTIDDIDLSRIDRERVRQDEDLFYLVACASFVESGSDLYTHNLVEFYKGD 60 M+ ++ HW I D+D S I+ +VR DE+LFYLVACASFVESGSDLYT NLV++Y + Sbjct: 6 MHKGSEQNTHWKIADLDFSTINIPKVRPDENLFYLVACASFVESGSDLYTQNLVDYYGDE 65 Query: 61 AEVETWLREQWEPEELQHGAALRAYVEHVWPEFDWPRAYQGFLDEYSQYCKVELLEPTRA 120 E+ TWLREQWE EELQHG ALRAYVEH+WPEFDWP AY+ FL+EYS YCKVELLEP++ Sbjct: 66 PEISTWLREQWEVEELQHGQALRAYVEHIWPEFDWPTAYRNFLEEYSTYCKVELLEPSKG 125 Query: 121 QELAARCVVETGTSTYYRALARATDEPVLKHLAGLIANDEVNHYKHFYQYFRRYRRQENI 180 E+ ARCVVE GT+T+Y AL+R+TDEPVLK LA IA DEVNHYKHF++YFRR+R+ E + Sbjct: 126 LEMVARCVVEAGTATFYSALSRSTDEPVLKDLASRIARDEVNHYKHFFRYFRRFRQHEGL 185 Query: 181 GRSRVFGTLSRRTLELKSEDADCAIRHVVMVYKPELAADPARVKELASRMSRTVRVNLKP 240 R R+FG L RRTLE+K+EDA CA+RHV+ P+ A + A ++++ S+M+ T+R +L P Sbjct: 186 RRHRIFGALRRRTLEMKNEDAACALRHVLGTRAPQHADNQAMLQQIHSKMNTTIRSHLSP 245 Query: 241 ETTIKMIMRPLELPVTLQNMIEFPLRQFMQRVLLR 275 + TIKMIMRPL+LP +Q+M+ +P+ Q M +V LR Sbjct: 246 DMTIKMIMRPLDLPPAVQSMVAYPVTQIMNKVFLR 280 >ref|YP_001856663.1| hypothetical protein Bphy_0424 [Burkholderia phymatum STM815] gb|ACC69617.1| conserved hypothetical protein [Burkholderia phymatum STM815] Length = 275 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 138/265 (52%), Positives = 187/265 (70%) Query: 11 WTIDDIDLSRIDRERVRQDEDLFYLVACASFVESGSDLYTHNLVEFYKGDAEVETWLREQ 70 W I+DIDL+R+DR+R +EDL L+ +SF+ESG+DLYT NL +F+ GD EV WL + Sbjct: 11 WRIEDIDLNRVDRQRAAANEDLLLLLCASSFIESGTDLYTSNLSKFFNGDPEVSAWLNNE 70 Query: 71 WEPEELQHGAALRAYVEHVWPEFDWPRAYQGFLDEYSQYCKVELLEPTRAQELAARCVVE 130 WEPEE+QHG AL+AY+ HVWPEFDW A++ F +EYS+ C VE E TRA E+ ARCVVE Sbjct: 71 WEPEEMQHGRALKAYIAHVWPEFDWDTAFRNFFEEYSKTCSVEDFEKTRALEMVARCVVE 130 Query: 131 TGTSTYYRALARATDEPVLKHLAGLIANDEVNHYKHFYQYFRRYRRQENIGRSRVFGTLS 190 TGT+T YRA+ +DEPVLK + I DEV HYKHF++YF++Y + E GR V G L Sbjct: 131 TGTATLYRAIGVCSDEPVLKEITDNIRTDEVRHYKHFFKYFKKYNKIEGNGRLAVLGALM 190 Query: 191 RRTLELKSEDADCAIRHVVMVYKPELAADPARVKELASRMSRTVRVNLKPETTIKMIMRP 250 RR +E+K+ED++ A+RHV V PE DPA ++ A+R++R VR NL + +KM+++P Sbjct: 191 RRVMEIKNEDSEIALRHVFAVRYPERVNDPAYNRDKAARVNRLVRHNLSADMCVKMLLKP 250 Query: 251 LELPVTLQNMIEFPLRQFMQRVLLR 275 LELP +Q + +PL + Q V R Sbjct: 251 LELPAKIQPGVHYPLAKITQHVFFR 275