BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1786.p (197 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778079.1| hypothetical protein Hsero_4705 [Herbaspiril... 311 3e-83 ref|YP_983789.1| hypothetical protein Pnap_3572 [Polaromonas nap... 223 1e-56 ref|ZP_08274218.1| hypothetical protein IMCC9480_2620 [Oxalobact... 207 5e-52 ref|YP_001888374.1| hypothetical protein Bphyt_4633 [Burkholderi... 199 1e-49 ref|YP_001862675.1| hypothetical protein Bphy_6601 [Burkholderia... 193 1e-47 >ref|YP_003778079.1| hypothetical protein Hsero_4705 [Herbaspirillum seropedicae SmR1] gb|ADJ66171.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 197 Score = 311 bits (798), Expect = 3e-83, Method: Composition-based stats. Identities = 177/197 (89%), Positives = 186/197 (94%) Query: 1 MQKRKFLSLGASLLAAPVALPALAADKKPGAAAGPVLLTVTGDISKANRGPLDPALDQMM 60 MQKRKFLSLGASLLAAPVALPALAADKK GA+AGPVLLT+TGDI KANRG LDPALDQMM Sbjct: 1 MQKRKFLSLGASLLAAPVALPALAADKKAGASAGPVLLTITGDIGKANRGALDPALDQMM 60 Query: 61 AKQKLAFDRAHTFDFAALAALPSVEIHPTLEYDGRRHSLRGPLLSEVLRTVGGPATVQNC 120 AKQKL+FD+A+TFDFAALAALPSVEI PTLEYDGRRH LRGPLLSEVLR VG PA ++NC Sbjct: 61 AKQKLSFDKAYTFDFAALAALPSVEIQPTLEYDGRRHRLRGPLLSEVLRAVGAPAALENC 120 Query: 121 ALRAVDGYAVLVSAEDIAKYRFIIATHLDGKPIPLGGLGPLWAVYDADSFPEMSARPLPE 180 ALRAVDGYAVLVS DIAKYRFIIATHLDGKPIPLGGLGPLWAVYDADSFP+M+AR LPE Sbjct: 121 ALRAVDGYAVLVSPADIAKYRFIIATHLDGKPIPLGGLGPLWAVYDADSFPDMAARALPE 180 Query: 181 RFGQCPWGLYHIAVRKA 197 RFGQCPWGLYHIAVRKA Sbjct: 181 RFGQCPWGLYHIAVRKA 197 >ref|YP_983789.1| hypothetical protein Pnap_3572 [Polaromonas naphthalenivorans CJ2] gb|ABM38868.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2] Length = 196 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 123/199 (61%), Positives = 147/199 (73%), Gaps = 5/199 (2%) Query: 1 MQKRKFLSLGASLLAAPVALPALAADK-KPGAAAGPVLLTVTGDISKANRGPLDPALDQM 59 M+KR FL+ + LA VA+P+ AA + A AGP LLTV+G I NRGPLDPALDQM Sbjct: 1 MKKRHFLN---ASLAGAVAMPSWAAAQGSRRAPAGPTLLTVSGRIGAGNRGPLDPALDQM 57 Query: 60 MAKQKLAFDRAHTFDFAALAALPSVEIHPTLEYDGRRHSLRGPLLSEVLRTVGGPATVQN 119 MAKQK+ FD+A FDFAA+ ALP+V I PTLEYDG+ HSL+GPLL +V++ G A + Sbjct: 58 MAKQKIMFDKAQVFDFAAITALPAVTIQPTLEYDGKPHSLKGPLLLDVMKACGVKAGDKT 117 Query: 120 CA-LRAVDGYAVLVSAEDIAKYRFIIATHLDGKPIPLGGLGPLWAVYDADSFPEMSARPL 178 LRAVDGYA VSA D KYRFI+ATHLDG+P+ LGGLGPLW VYDAD FP+M+A+PL Sbjct: 118 MLFLRAVDGYAAQVSAADAGKYRFIVATHLDGQPMALGGLGPLWGVYDADRFPDMAAKPL 177 Query: 179 PERFGQCPWGLYHIAVRKA 197 P RF CPW YHI VR+ Sbjct: 178 PARFANCPWATYHIEVREG 196 >ref|ZP_08274218.1| hypothetical protein IMCC9480_2620 [Oxalobacteraceae bacterium IMCC9480] gb|EGF32306.1| hypothetical protein IMCC9480_2620 [Oxalobacteraceae bacterium IMCC9480] Length = 195 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 109/164 (66%), Positives = 126/164 (76%), Gaps = 1/164 (0%) Query: 33 AGPVLLTVTGDISKANRGPLDPALDQMMAKQKLAFDRAHTFDFAALAALPSVEIHPTLEY 92 AGP LLTVTG I NRGPLDPALDQ+M KQ LAF RA+TFD+AAL ALP++ I PTLEY Sbjct: 31 AGPTLLTVTGLIGPGNRGPLDPALDQLMKKQGLAFTRAYTFDYAALRALPAMTISPTLEY 90 Query: 93 DGRRHSLRGPLLSEVLRTVGGPATVQ-NCALRAVDGYAVLVSAEDIAKYRFIIATHLDGK 151 DG+ H+L GPLLS+VL+ G Q LRA+DGY V V D+ KYRFI+AT LDGK Sbjct: 91 DGKVHALGGPLLSDVLKAAGATTGRQGKVLLRAIDGYVVAVPIVDMQKYRFIVATMLDGK 150 Query: 152 PIPLGGLGPLWAVYDADSFPEMSARPLPERFGQCPWGLYHIAVR 195 +PLGGLGPLWAVYDAD FP+M+ARP+ ERF CPW LYHI V+ Sbjct: 151 SMPLGGLGPLWAVYDADRFPDMAARPVTERFTLCPWALYHIEVQ 194 >ref|YP_001888374.1| hypothetical protein Bphyt_4633 [Burkholderia phytofirmans PsJN] gb|ACD19004.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN] Length = 198 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 103/200 (51%), Positives = 136/200 (68%), Gaps = 5/200 (2%) Query: 1 MQKRKFLSLGASLLAAPVALPALAADK--KPGAAAGPVLLTVTGDISKANRGPLDPALDQ 58 M KR FL+ A L A PA + + K AA PV+LT+TG I + NRG LDPA DQ Sbjct: 1 MNKRNFLTSAA--LLGVTAAPAFGSQRVRKEACAASPVVLTITGAIKRHNRGALDPAFDQ 58 Query: 59 MMAKQKLAFDRAHTFDFAALAALPSVEIHPTLEYDGRRHSLRGPLLSEVLRTVGGP-ATV 117 ++AK ++ F A+ DFA+LA +P+V I PT EYD R+H+L GPLL+ VL VG P A Sbjct: 59 LLAKHQVKFSEAYAVDFASLAGMPAVTIRPTTEYDSRQHTLSGPLLTHVLEHVGAPSAGS 118 Query: 118 QNCALRAVDGYAVLVSAEDIAKYRFIIATHLDGKPIPLGGLGPLWAVYDADSFPEMSARP 177 + AVDGYAV + + + Y+FI+AT +DGKP+PLGG+GPLWA YDAD+ PE+S++P Sbjct: 119 TQIVMHAVDGYAVATTLDKVRAYQFIVATQMDGKPLPLGGVGPLWATYDADNIPELSSKP 178 Query: 178 LPERFGQCPWGLYHIAVRKA 197 L +RF PWGLYH+ V +A Sbjct: 179 LKDRFELSPWGLYHLQVTEA 198 >ref|YP_001862675.1| hypothetical protein Bphy_6601 [Burkholderia phymatum STM815] gb|ACC75629.1| conserved hypothetical protein [Burkholderia phymatum STM815] Length = 198 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 104/198 (52%), Positives = 137/198 (69%), Gaps = 1/198 (0%) Query: 1 MQKRKFLSLGASLLAAPVALPALAADKKPGAAAGPVLLTVTGDISKANRGPLDPALDQMM 60 M KR+FL+ A L A+ K AA P +LTV+G + NRGPLDPA D +M Sbjct: 1 MNKRQFLTRAAVLGASVTPAFGAGNAKPAACAAAPAILTVSGAVKHTNRGPLDPAFDPLM 60 Query: 61 AKQKLAFDRAHTFDFAALAALPSVEIHPTLEYDGRRHSLRGPLLSEVLRTVGGP-ATVQN 119 KQ + F A TFD+ ++A+LP+V I PT+EYD ++H+L GPLL+ VL G P A Sbjct: 61 TKQLVKFASARTFDYPSIASLPAVTIKPTVEYDAKQHTLSGPLLANVLEKAGVPGAGDTK 120 Query: 120 CALRAVDGYAVLVSAEDIAKYRFIIATHLDGKPIPLGGLGPLWAVYDADSFPEMSARPLP 179 +LRAVDGYAVL + ++I +RFI+AT +DGKP+PLGGLGPLWA+YDAD+ PE++A+PL Sbjct: 121 VSLRAVDGYAVLTTLDNIRAWRFIVATQMDGKPMPLGGLGPLWAIYDADNIPELAAKPLK 180 Query: 180 ERFGQCPWGLYHIAVRKA 197 +RF CPWGLY I V +A Sbjct: 181 DRFVLCPWGLYQIQVSEA 198