BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1781.p (411 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778073.1| major facilitator superfamily permease [Herb... 471 e-130 ref|ZP_08406543.1| major facilitator superfamily permease [Hylem... 430 e-118 ref|ZP_08273210.1| major facilitator superfamily MFS1 [Oxalobact... 333 3e-89 emb|CBA30515.1| hypothetical protein Csp_C23930 [Curvibacter put... 315 7e-84 ref|YP_001859101.1| major facilitator transporter [Burkholderia ... 298 1e-78 >ref|YP_003778073.1| major facilitator superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ66165.1| permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 402 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 354/402 (88%), Positives = 370/402 (92%) Query: 1 MPPHAAHAPSPFILRHPILTALALSLGTAVALGLARFSYALLLAPMRSDLGWPYLIAGGM 60 MP AA PSPFIL+HPILTALALSLGTAVALG+ARFSYALLLAPMR+DLGWPYL+AGGM Sbjct: 1 MPTDAARPPSPFILQHPILTALALSLGTAVALGVARFSYALLLAPMRADLGWPYLVAGGM 60 Query: 61 NTGNALGYLLGALSTPLLMRRFQAHRVLIAGAFATALLSFLPALTTDTLLQLLLRIVTGV 120 NTGNALGYLLGAL+TPLLMRRF AHRVLIAGAFATALLSFLPALTTDTLLQLLLR+VTGV Sbjct: 61 NTGNALGYLLGALATPLLMRRFLAHRVLIAGAFATALLSFLPALTTDTLLQLLLRVVTGV 120 Query: 121 TSALIFVSGGLLVSRLAALHAQRAGLLLGLYYGGTGIGIVAASLLVPPVMEAAAARGAPH 180 +SALIFVSGGLLVSRLAA+H RAGLLLGLYYGGTG+GIVAASLLVPPVM AA A GA H Sbjct: 121 SSALIFVSGGLLVSRLAAMHGHRAGLLLGLYYGGTGLGIVAASLLVPPVMAAALAHGAAH 180 Query: 181 PWQWAWILLGVLALLASLVMTLPARLMPTSPAQAAGGGAWRPRSLLFGLTGYLFFGLGYI 240 PWQWAW+LLG LAL ASLVM PARLMPT+ A G G W+ RSLLFGL GYLFFGLGYI Sbjct: 181 PWQWAWLLLGTLALAASLVMAGPARLMPTTAAHVQGNGRWQARSLLFGLIGYLFFGLGYI 240 Query: 241 GYMTFVIALLKEEGMAPARITLFFALLGAATFASSRIWARMLDRFQGGQSLAILNGLLCL 300 GYMTFVIALLKEEGM RITLFFALLGAATFASSRIWARMLDRF+GGQSLAILNGLL L Sbjct: 241 GYMTFVIALLKEEGMPAERITLFFALLGAATFASSRIWARMLDRFRGGQSLAILNGLLAL 300 Query: 301 ATLLPAMTAAPVAVFASGLLFGGCFLSAVASTTAMVRHNLPPSDWPAGISAFTIIFAVGQ 360 ATLLPA+TA PVAVFASGLLFGGCFLSAVASTTAMVRHNLPP WPAGISAFTIIFAVGQ Sbjct: 301 ATLLPALTAEPVAVFASGLLFGGCFLSAVASTTAMVRHNLPPHHWPAGISAFTIIFAVGQ 360 Query: 361 IIGPSIVGWIADGAGGLQRGLTFSALMLLAGALVAWRQRPLG 402 IIGP+IVGWIADGAGGLQRGL+FSALMLLAGAL AWRQRPL Sbjct: 361 IIGPTIVGWIADGAGGLQRGLSFSALMLLAGALTAWRQRPLA 402 >ref|ZP_08406543.1| major facilitator superfamily permease [Hylemonella gracilis ATCC 19624] gb|EGI76338.1| major facilitator superfamily permease [Hylemonella gracilis ATCC 19624] Length = 407 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 301/390 (77%), Positives = 332/390 (85%) Query: 12 FILRHPILTALALSLGTAVALGLARFSYALLLAPMRSDLGWPYLIAGGMNTGNALGYLLG 71 F+ RHPILTALALSLGTA+ALG+ARFSYALLL PMR DLGW YL+AGGMNTGNALGYLLG Sbjct: 14 FVARHPILTALALSLGTAIALGVARFSYALLLTPMRDDLGWSYLVAGGMNTGNALGYLLG 73 Query: 72 ALSTPLLMRRFQAHRVLIAGAFATALLSFLPALTTDTLLQLLLRIVTGVTSALIFVSGGL 131 AL+TPLLMRR AHRVLI GAF TALL+F+P TDT QL LR+VTG+TSA +FV+GGL Sbjct: 74 ALATPLLMRRLTAHRVLILGAFGTALLTFVPGFVTDTTAQLALRVVTGLTSAFLFVAGGL 133 Query: 132 LVSRLAALHAQRAGLLLGLYYGGTGIGIVAASLLVPPVMEAAAARGAPHPWQWAWILLGV 191 LVSRLAALHAQRAGLLLGLYYGGTG+GIVAA+LL+PPVM+AAA GAPHPWQWAW LLG Sbjct: 134 LVSRLAALHAQRAGLLLGLYYGGTGLGIVAAALLLPPVMQAAAHEGAPHPWQWAWWLLGA 193 Query: 192 LALLASLVMTLPARLMPTSPAQAAGGGAWRPRSLLFGLTGYLFFGLGYIGYMTFVIALLK 251 LALLAS +M LP R +P Q A GG +R L FGL GYL FGLGYIGYMTFVIA+LK Sbjct: 194 LALLASAIMALPTRHIPAPATQTATGGGFRAGPLKFGLLGYLMFGLGYIGYMTFVIAMLK 253 Query: 252 EEGMAPARITLFFALLGAATFASSRIWARMLDRFQGGQSLAILNGLLCLATLLPAMTAAP 311 E GM +T+FF LLG ATFASSRIWAR+LDRF+GGQSLAILNGLLC+ATLLPA TA P Sbjct: 254 ETGMTSQGVTVFFTLLGVATFASSRIWARLLDRFRGGQSLAILNGLLCVATLLPAWTAQP 313 Query: 312 VAVFASGLLFGGCFLSAVASTTAMVRHNLPPSDWPAGISAFTIIFAVGQIIGPSIVGWIA 371 VFASG+LFG CFLSAVASTTAMVRHNLPP+ WPAGISAFTI+FA GQI+GP+IVGWIA Sbjct: 314 GVVFASGILFGACFLSAVASTTAMVRHNLPPAHWPAGISAFTIVFAAGQIVGPTIVGWIA 373 Query: 372 DGAGGLQRGLTFSALMLLAGALVAWRQRPL 401 D AGGLQRGL FSA+ L GAL+A QR L Sbjct: 374 DAAGGLQRGLLFSAVALGVGALLAGCQRAL 403 >ref|ZP_08273210.1| major facilitator superfamily MFS1 [Oxalobacteraceae bacterium IMCC9480] gb|EGF33315.1| major facilitator superfamily MFS1 [Oxalobacteraceae bacterium IMCC9480] Length = 393 Score = 333 bits (855), Expect = 3e-89, Method: Composition-based stats. Identities = 232/387 (59%), Positives = 287/387 (74%), Gaps = 2/387 (0%) Query: 16 HPILTALALSLGTAVALGLARFSYALLLAPMRSDLGWPYLIAGGMNTGNALGYLLGALST 75 HP+ A ALSLG AV+LG++RFSYALLL PMR+DL W YL+AG MNT NALGYL+GAL+T Sbjct: 9 HPLAIAFALSLGAAVSLGMSRFSYALLLPPMRADLDWSYLLAGAMNTANALGYLIGALAT 68 Query: 76 PLLMRRFQAHRVLIAGAFATALLSFLPALTTDTLLQLLLRIVTGVTSALIFVSGGLLVSR 135 P LMRRF A VL+AGA T L L TD L+ R++ G+ SAL+FV+GG+L +R Sbjct: 69 PALMRRFGAQTVLLAGALLTVLFLLGSGLVTDATFLLVQRLLAGIASALVFVTGGVLAAR 128 Query: 136 LAALHAQRAGLLLGLYYGGTGIGIVAASLLVPPVMEAAAARGAPHPWQWAWILLGVLALL 195 L +LH QRAGLL+G+YYGGTG GIV ++LLVP A+ A+G+ H WQWAW+ LG + LL Sbjct: 129 LGSLHPQRAGLLIGIYYGGTGFGIVLSALLVPAT--ASLAQGSAHAWQWAWLTLGAMCLL 186 Query: 196 ASLVMTLPARLMPTSPAQAAGGGAWRPRSLLFGLTGYLFFGLGYIGYMTFVIALLKEEGM 255 A+ VM LP R + A+ + R +GL GY +G+GYIGYMTFV+ALL+E+GM Sbjct: 187 ATAVMALPVRSIDGKAPPASVHDRFDWRPFRYGLAGYFMYGVGYIGYMTFVVALLREQGM 246 Query: 256 APARITLFFALLGAATFASSRIWARMLDRFQGGQSLAILNGLLCLATLLPAMTAAPVAVF 315 + ITLF+ LG A ASSRIWA +LDR +GG+++A+L+GLL LATLLPA+TA P+ VF Sbjct: 247 SAGLITLFYTGLGLAVMASSRIWAGLLDRSRGGRAMALLSGLLALATLLPALTAQPLLVF 306 Query: 316 ASGLLFGGCFLSAVASTTAMVRHNLPPSDWPAGISAFTIIFAVGQIIGPSIVGWIADGAG 375 SGLLFGG FLS VAS+TA+VRHN P + W GI AFT +FA GQI+GP +VGWIADG G Sbjct: 307 GSGLLFGGVFLSVVASSTALVRHNAPMAAWSGGIGAFTSVFAFGQIVGPGVVGWIADGPG 366 Query: 376 GLQRGLTFSALMLLAGALVAWRQRPLG 402 GLQRGL FSAL LL AL+A RQR L Sbjct: 367 GLQRGLVFSALALLVAALLASRQRALA 393 >emb|CBA30515.1| hypothetical protein Csp_C23930 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 410 Score = 315 bits (808), Expect = 7e-84, Method: Composition-based stats. Identities = 205/386 (53%), Positives = 264/386 (68%), Gaps = 7/386 (1%) Query: 21 ALALSLGTAVALGLARFSYALLLAPMRSDLGWPYLIAGGMNTGNALGYLLGALSTPLLMR 80 ALALS+G AV+LG+ RF+Y LLL MR+DLGW Y +AG MNT NALGY +GAL TP L+R Sbjct: 24 ALALSVGAAVSLGITRFAYGLLLPAMRTDLGWTYTLAGAMNTANALGYFIGALLTPRLLR 83 Query: 81 RFQAHRVLIAGAFATALLSFLPALTTDTLLQLLLRIVTGVTSALIFVSGGLLVSRLAALH 140 +L GA + L TD L+ R++ G+ SAL+FV+GGLL +R+ A + Sbjct: 84 SRGPGELLWGGALLATVFMALSGFFTDANALLVQRLLAGIASALVFVAGGLLAARMGARY 143 Query: 141 AQRAGLLLGLYYGGTGIGIVAASLLVPPVMEAAAARGAPHPWQWAWILLGVLALLASLVM 200 + GLLLG+YYGGTG+GIVA++LLVP ++E A G H W+W+W L ++ + VM Sbjct: 144 PRHGGLLLGIYYGGTGLGIVASALLVPWLLERFA--GQAHGWRWSWWALALICAAGTAVM 201 Query: 201 TLPARLM-----PTSPAQAAGGGAWRPRSLLFGLTGYLFFGLGYIGYMTFVIALLKEEGM 255 PAR+M P + A A G + +GL GY FG+GYIGYMTFV+ALL+ +G Sbjct: 202 LWPARVMSGWALPQAQAAAGGPQQFHWADFRYGLAGYTLFGVGYIGYMTFVVALLRSQGT 261 Query: 256 APARITLFFALLGAATFASSRIWARMLDRFQGGQSLAILNGLLCLATLLPAMTAAPVAVF 315 + A +T+F++LLG A ASSRIWAR+LD+ G+ LA LN LL +AT+LPA+T V Sbjct: 262 SAAAVTVFYSLLGVAVMASSRIWARLLDKHHDGRPLATLNALLGVATILPALTQWWPVVL 321 Query: 316 ASGLLFGGCFLSAVASTTAMVRHNLPPSDWPAGISAFTIIFAVGQIIGPSIVGWIADGAG 375 SGLLFG FLS VASTTA+VRHNLPP+ W AGISAFT +FA GQI+GP++VGWIADG G Sbjct: 322 VSGLLFGAVFLSVVASTTALVRHNLPPAAWAAGISAFTTVFAAGQIVGPTVVGWIADGPG 381 Query: 376 GLQRGLTFSALMLLAGALVAWRQRPL 401 GL RGL FSA L G+ + RQ+ L Sbjct: 382 GLARGLVFSACALWVGSALGLRQKAL 407 >ref|YP_001859101.1| major facilitator transporter [Burkholderia phymatum STM815] gb|ACC72055.1| major facilitator superfamily MFS_1 [Burkholderia phymatum STM815] Length = 391 Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats. Identities = 207/384 (53%), Positives = 267/384 (69%), Gaps = 9/384 (2%) Query: 26 LGTAVALGLARFSYALLLAPMRSDLGWPYLIAGGMNTGNALGYLLGALSTPLLMRRFQAH 85 +G+A+ALGLARFSYALLL PM+ DLGW + +G MNT NALGYLLGAL+ + RR+ A Sbjct: 1 MGSAIALGLARFSYALLLPPMKIDLGWSFAQSGAMNTANALGYLLGALAFTRMSRRWSAG 60 Query: 86 RVLIAGAFATALLSFLPALTTDTLLQLLLRIVTGVTSALIFVSGGLLVSRLAALHAQRAG 145 + +AG ATALL + + TDT L R+ TG+ SA +FVSGG+L +RLA H + AG Sbjct: 61 VLCVAGCIATALLMAITGMLTDTNALLAQRVATGIASAFVFVSGGVLAARLATAHPRDAG 120 Query: 146 LLLGLYYGGTGIGIVAASLLVPPVMEAAAARGAPHPWQWAWILLGVLALLASLVMTLPAR 205 L+LGLYYGGTG GIVA++LLVP + + ++ H WQ AW L + SL+ AR Sbjct: 121 LVLGLYYGGTGWGIVASALLVPLALASFSSLHRAHVWQLAWFALAAACVAFSLLAGRAAR 180 Query: 206 LM--------PTSPAQAAGGGAWRPRSLLFGLTGYLFFGLGYIGYMTFVIALLKEEGMAP 257 + T+ +A G A F L GY FG+GYIGYMTF++ALL+ GM+ Sbjct: 181 RIDRQHVLRTETTSVASAAGRAPATMRYAFALAGYGLFGVGYIGYMTFIVALLRNGGMSA 240 Query: 258 ARITLFFALLGAATFASSRIWARMLDRFQGGQSLAILNGLLCLATLLPAMTAAPVAVFAS 317 +T F+ LLG AT S+RIW+R+LDR +GGQ+LA+LN LL LATL+PA+ A PV FAS Sbjct: 241 GVVTGFYVLLGVATIVSARIWSRLLDRTRGGQALALLNALLALATLMPAIVAHPVVAFAS 300 Query: 318 GLLFGGCFLSAVASTTAMVRHNLPPSDWPAGISAFTIIFAVGQIIGPSIVGWIADGAGGL 377 GLLFG FLSAVASTTA VRHNLP + W GISAFTI+FA GQI+GP+++GW++DG GL Sbjct: 301 GLLFGATFLSAVASTTAFVRHNLPAAHWGRGISAFTIVFAFGQIVGPTVIGWVSDGV-GL 359 Query: 378 QRGLTFSALMLLAGALVAWRQRPL 401 +RGL +SA +L AGA++A Q+ L Sbjct: 360 ERGLVYSACVLAAGAVLAGLQKAL 383