BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1776.p (324 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778069.1| 2-nitropropane dioxygenase [Herbaspirillum s... 581 e-164 ref|YP_004754885.1| putative dioxygenase [Collimonas fungivorans... 508 e-142 gb|ACN58901.1| dioxygenases related to 2-nitropropane dioxygenas... 498 e-139 ref|ZP_08275882.1| Dioxygenase related to 2-nitropropane dioxyge... 484 e-135 ref|YP_001355242.1| hypothetical protein mma_3552 [Janthinobacte... 484 e-135 >ref|YP_003778069.1| 2-nitropropane dioxygenase [Herbaspirillum seropedicae SmR1] gb|ADJ66161.1| 2-nitropropane dioxygenase protein [Herbaspirillum seropedicae SmR1] Length = 324 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 309/324 (95%), Positives = 316/324 (97%) Query: 1 MPPAPAYPKALQDLRLPIICSPMFIASGPALVAAQCKAGLVGSFPALNARPAELLDTWLT 60 M APAYPKALQDLRLPIICSPMFIASGPALVAAQCKAGLVGSFPALNARPAELLDTWLT Sbjct: 1 MTSAPAYPKALQDLRLPIICSPMFIASGPALVAAQCKAGLVGSFPALNARPAELLDTWLT 60 Query: 61 QLQDELTQWQAEHPQRKAGPIAVNQIVHQSNDRLAQDVATCVKHQVPIIISSLRAPPKEM 120 QLQ+EL QWQAEH QRK GPIAVNQIVHQSNDRLAQDVATCVKHQVPIIISSLRAPP+EM Sbjct: 61 QLQEELAQWQAEHAQRKVGPIAVNQIVHQSNDRLAQDVATCVKHQVPIIISSLRAPPQEM 120 Query: 121 LDAVHSYGGIVLHDVISLRHAEKALEAGVDGLILVAAGAGGHAGTLSPFALVGEVRKMFK 180 LDAVHSYGGIVLHDVISLRHAEKALEAGVDGLILVAAGAGGHAGTLSPFALVGEVRKMFK Sbjct: 121 LDAVHSYGGIVLHDVISLRHAEKALEAGVDGLILVAAGAGGHAGTLSPFALVGEVRKMFK 180 Query: 181 GPLALSGSIATGDAVLAAQAMGADFAYMGSRWLATRESNVDDAYRQAIVESTAADVVYTN 240 GPL LSG+IATGDAVLAAQAMGADFAYMGSRWLAT+ESNVD AYRQAIV+STAADVVYTN Sbjct: 181 GPLVLSGAIATGDAVLAAQAMGADFAYMGSRWLATQESNVDQAYRQAIVDSTAADVVYTN 240 Query: 241 LFTGVHGNYLKKSIVNAGLDPDNLPEADKTKMNFGSGGGSKAKAWRDIWGAGQGVGLMED 300 LFTGVHGNYLKKSIVNAGLDPDNLPEADKTKMNFGSGGGSKAKAWRDIWGAGQGVGLM+D Sbjct: 241 LFTGVHGNYLKKSIVNAGLDPDNLPEADKTKMNFGSGGGSKAKAWRDIWGAGQGVGLMDD 300 Query: 301 VPTVAEMVDRLEEEYRAARARLAL 324 VPTVAEMVDRLE EYRAAR+RLAL Sbjct: 301 VPTVAEMVDRLEAEYRAARSRLAL 324 >ref|YP_004754885.1| putative dioxygenase [Collimonas fungivorans Ter331] gb|AEK64062.1| putative dioxygenase [Collimonas fungivorans Ter331] Length = 319 Score = 508 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 272/319 (85%), Positives = 296/319 (92%), Gaps = 1/319 (0%) Query: 6 AYPKALQDLRLPIICSPMFIASGPALVAAQCKAGLVGSFPALNARPAELLDTWLTQLQDE 65 A P ALQ+L LP+I SPMFIASGPALVAAQCKAG+VGSFPALNARPAELLD WLT LQ E Sbjct: 2 ALPAALQNLSLPVIGSPMFIASGPALVAAQCKAGIVGSFPALNARPAELLDVWLTDLQAE 61 Query: 66 LTQWQAEHPQRKAGPIAVNQIVHQSNDRLAQDVATCVKHQVPIIISSLRAPPKEMLDAVH 125 L +QAEHP K GPIAVNQIVHQSNDRLA DVA CVKH+VPIIISSLRAPP EM+DA+H Sbjct: 62 LAAYQAEHPNAKVGPIAVNQIVHQSNDRLAHDVAVCVKHKVPIIISSLRAPPPEMMDAIH 121 Query: 126 SYGGIVLHDVISLRHAEKALEAGVDGLILVAAGAGGHAGTLSPFALVGEVRKMFKGPLAL 185 YGGIVLHDVIS+RHA+KALEAGVDGLILVAAGAGGHAG LSPFALVGEVRK FKG +AL Sbjct: 122 GYGGIVLHDVISIRHAQKALEAGVDGLILVAAGAGGHAGPLSPFALVGEVRKFFKGTIAL 181 Query: 186 SGSIATGDAVLAAQAMGADFAYMGSRWLATRESNVDDAYRQAIVESTAADVVYTNLFTGV 245 SG+IATGDA+LAAQAMGADFAY+GSRWLAT+E++VDDAYRQAIVES+AADVVYTNLFTGV Sbjct: 182 SGAIATGDAILAAQAMGADFAYIGSRWLATKEAHVDDAYRQAIVESSAADVVYTNLFTGV 241 Query: 246 HGNYLKKSIVNAGLDPDNLPEADKTKMNFGSGGGSKAKAWRDIWGAGQGVGLMEDVPTVA 305 HGNYLKKSIVNAGLDPDNLPEADK+KMNFGS GG+ AKAWRDIWGAGQGVGLM+DVP+VA Sbjct: 242 HGNYLKKSIVNAGLDPDNLPEADKSKMNFGS-GGTGAKAWRDIWGAGQGVGLMDDVPSVA 300 Query: 306 EMVDRLEEEYRAARARLAL 324 +MVDRL+ EY+AAR RLAL Sbjct: 301 QMVDRLQTEYQAARKRLAL 319 >gb|ACN58901.1| dioxygenases related to 2-nitropropane dioxygenase [uncultured bacterium BLR18] Length = 325 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 250/315 (79%), Positives = 283/315 (89%) Query: 8 PKALQDLRLPIICSPMFIASGPALVAAQCKAGLVGSFPALNARPAELLDTWLTQLQDELT 67 P+ L++L +P+I SPMFIASGP LVAAQCK G+VGSFPALNARPAELLDTWLT+LQ EL Sbjct: 9 PEVLRNLSMPVIASPMFIASGPKLVAAQCKTGIVGSFPALNARPAELLDTWLTELQAELA 68 Query: 68 QWQAEHPQRKAGPIAVNQIVHQSNDRLAQDVATCVKHQVPIIISSLRAPPKEMLDAVHSY 127 +QA +P GPIAVNQIVH SN RL D+ CV+H+VPI+ISSLRAPP +MLDA+HSY Sbjct: 69 AYQAANPDAIIGPIAVNQIVHHSNSRLEHDIEVCVRHKVPIVISSLRAPPPDMLDAIHSY 128 Query: 128 GGIVLHDVISLRHAEKALEAGVDGLILVAAGAGGHAGTLSPFALVGEVRKMFKGPLALSG 187 GGIVLHDVI++RHA+KALEAGVDGLILVA+GAGGHAGTLSPFALVGEVR+ F GP+ALSG Sbjct: 129 GGIVLHDVINIRHAQKALEAGVDGLILVASGAGGHAGTLSPFALVGEVRRFFNGPVALSG 188 Query: 188 SIATGDAVLAAQAMGADFAYMGSRWLATRESNVDDAYRQAIVESTAADVVYTNLFTGVHG 247 SIATGDA+LAAQAMGADFAY+GSRWLAT E+NVDDAYRQAI+ES+AADVVYTNLFTGVHG Sbjct: 189 SIATGDAILAAQAMGADFAYIGSRWLATEEANVDDAYRQAILESSAADVVYTNLFTGVHG 248 Query: 248 NYLKKSIVNAGLDPDNLPEADKTKMNFGSGGGSKAKAWRDIWGAGQGVGLMEDVPTVAEM 307 NYLKKSI AGLDP+NLP ADKTKM+FGSGGG+KAKAWRDIWGAGQGVGLM D P+VAE+ Sbjct: 249 NYLKKSIEAAGLDPENLPVADKTKMDFGSGGGNKAKAWRDIWGAGQGVGLMHDAPSVAEV 308 Query: 308 VDRLEEEYRAARARL 322 RL+ EY+AAR RL Sbjct: 309 AARLKAEYQAARERL 323 >ref|ZP_08275882.1| Dioxygenase related to 2-nitropropane dioxygenase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30647.1| Dioxygenase related to 2-nitropropane dioxygenase [Oxalobacteraceae bacterium IMCC9480] Length = 317 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 262/319 (82%), Positives = 285/319 (89%), Gaps = 3/319 (0%) Query: 6 AYPKALQDLRLPIICSPMFIASGPALVAAQCKAGLVGSFPALNARPAELLDTWLTQLQDE 65 A P ALQ+L LP+I SP+FIASGPALV AQCKAG+VGSFPALNARPA LLDTWLT ++ + Sbjct: 2 ALPVALQNLSLPVIGSPLFIASGPALVTAQCKAGIVGSFPALNARPAALLDTWLTDIKAD 61 Query: 66 LTQWQAEHPQRKAGPIAVNQIVHQSNDRLAQDVATCVKHQVPIIISSLRAPPKEMLDAVH 125 L ++ +PQ GPIAVNQIVHQSNDRLA DV CVKHQ+PIIISSLRAPPKEM+DA+H Sbjct: 62 LAAYKLANPQALVGPIAVNQIVHQSNDRLAHDVEMCVKHQIPIIISSLRAPPKEMMDAIH 121 Query: 126 SYGGIVLHDVISLRHAEKALEAGVDGLILVAAGAGGHAGTLSPFALVGEVRKMFKGPLAL 185 SYGGIVLHDVIS+RHA+KALE GVDGLILVAAGAGGHAG LSPFALVGEVRK F GP+AL Sbjct: 122 SYGGIVLHDVISIRHAQKALEVGVDGLILVAAGAGGHAGALSPFALVGEVRKFFSGPVAL 181 Query: 186 SGSIATGDAVLAAQAMGADFAYMGSRWLATRESNVDDAYRQAIVESTAADVVYTNLFTGV 245 SGSIATGDAVLAAQAMGADFAY+GSRWLAT+ESNVDDAYRQAIVES+AAD+VYTNLFTGV Sbjct: 182 SGSIATGDAVLAAQAMGADFAYIGSRWLATKESNVDDAYRQAIVESSAADIVYTNLFTGV 241 Query: 246 HGNYLKKSIVNAGLDPDNLPEADKTKMNFGSGGGSKAKAWRDIWGAGQGVGLMEDVPTVA 305 HGNYLKKSIV AGLDPDNLP ADKT MNFGS + AKAWRDIWGAGQGVGLM+DV TVA Sbjct: 242 HGNYLKKSIVAAGLDPDNLPVADKTAMNFGS---TNAKAWRDIWGAGQGVGLMDDVLTVA 298 Query: 306 EMVDRLEEEYRAARARLAL 324 EMV RL+ EY AARARL L Sbjct: 299 EMVARLKAEYDAARARLKL 317 >ref|YP_001355242.1| hypothetical protein mma_3552 [Janthinobacterium sp. Marseille] gb|ABR89744.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 326 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 253/322 (78%), Positives = 287/322 (89%) Query: 3 PAPAYPKALQDLRLPIICSPMFIASGPALVAAQCKAGLVGSFPALNARPAELLDTWLTQL 62 P P LQ+L LP+I +PMFIASGPALV AQCKAG+VG+FPALNARP ELLD WL+++ Sbjct: 5 PQNRLPAVLQNLALPVIGAPMFIASGPALVKAQCKAGIVGAFPALNARPPELLDAWLSEI 64 Query: 63 QDELTQWQAEHPQRKAGPIAVNQIVHQSNDRLAQDVATCVKHQVPIIISSLRAPPKEMLD 122 Q +L +QAEHP GPIAVNQIVHQSNDRLA DV CV+H+VPIIISSLRAPPKEM+D Sbjct: 65 QADLAAYQAEHPDAIIGPIAVNQIVHQSNDRLAHDVEVCVRHRVPIIISSLRAPPKEMMD 124 Query: 123 AVHSYGGIVLHDVISLRHAEKALEAGVDGLILVAAGAGGHAGTLSPFALVGEVRKMFKGP 182 A+HSYGGIVLHDVIS+RHA+KALEAGVDGLILVAAGAGGHAGTLSPF LVGEVRK F+GP Sbjct: 125 AIHSYGGIVLHDVISIRHAQKALEAGVDGLILVAAGAGGHAGTLSPFVLVGEVRKFFQGP 184 Query: 183 LALSGSIATGDAVLAAQAMGADFAYMGSRWLATRESNVDDAYRQAIVESTAADVVYTNLF 242 +ALSG+IATGDAVLAAQAMGADFAY+GSRWLAT+ESNVD+AYR+AIV S AADVVYTNLF Sbjct: 185 IALSGAIATGDAVLAAQAMGADFAYIGSRWLATKESNVDEAYREAIVSSAAADVVYTNLF 244 Query: 243 TGVHGNYLKKSIVNAGLDPDNLPEADKTKMNFGSGGGSKAKAWRDIWGAGQGVGLMEDVP 302 TGVHGNYLKKSI+NAGLDPDNLP+ADKT MNFGSG GSK KAWRDIWGAGQGVGL+++V Sbjct: 245 TGVHGNYLKKSIINAGLDPDNLPQADKTVMNFGSGSGSKIKAWRDIWGAGQGVGLIDEVA 304 Query: 303 TVAEMVDRLEEEYRAARARLAL 324 +VA++V R+ EY AA+ RL + Sbjct: 305 SVADIVRRMSAEYAAAKKRLQI 326