BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1772.p (275 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778066.1| beta-lactamase [Herbaspirillum seropedicae S... 471 e-131 ref|ZP_08275067.1| beta-lactamase-like protein [Oxalobacteraceae... 341 6e-92 ref|YP_004754886.1| beta-lactamase-like protein [Collimonas fung... 337 9e-91 ref|YP_556777.1| putative metallo-beta-lactamase superfamily pro... 279 4e-73 ref|ZP_06843681.1| beta-lactamase domain protein [Burkholderia s... 278 5e-73 >ref|YP_003778066.1| beta-lactamase [Herbaspirillum seropedicae SmR1] gb|ADJ66158.1| beta-lactamase protein [Herbaspirillum seropedicae SmR1] Length = 309 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 234/275 (85%), Positives = 249/275 (90%) Query: 1 MIDSGYVAHAEQTQTLVRHVLHQRGRERLDVLLNTHLHSDHCGGNAALHAAYGCRIAIPA 60 MIDSGYV HAEQT+TLVRHVL QRGR RLD+L+NTHLHSDHCGGNAAL + CRIAIPA Sbjct: 35 MIDSGYVTHAEQTRTLVRHVLAQRGRPRLDLLVNTHLHSDHCGGNAALQQEHHCRIAIPA 94 Query: 61 AEDAKVRQWDEDALSYRATGQRCPRFTHDQVIRSGDVLRLGDLDWTALAAPGHDPHALLL 120 AE+ KVR WDEDALSYRATGQRC RFT Q +RSG+VLR+G+LDW LAAPGHDPHALL Sbjct: 95 AEEEKVRHWDEDALSYRATGQRCARFTATQTLRSGEVLRMGELDWQVLAAPGHDPHALLF 154 Query: 121 YCAQEGVLISADALWRNGFGIIFPELDGESGFEEARATLELIRSLDVRTVIPGHGAPFTE 180 YCAQEGVL+SADALWRNGFGIIFPELDG+SGF EARATLELIRSL+VRTVIPGHGAPFTE Sbjct: 155 YCAQEGVLVSADALWRNGFGIIFPELDGQSGFAEARATLELIRSLEVRTVIPGHGAPFTE 214 Query: 181 VDDALEKAFSRLDYLQADPLRNAHNGIKVLVKFLLLERGRIALADLPTMMREIPLLRITN 240 VDDALEKAFSRLDYLQADP RNAHNGIKVLVKFLL+ERGRIAL LP MMREIPLLRITN Sbjct: 215 VDDALEKAFSRLDYLQADPRRNAHNGIKVLVKFLLMERGRIALEQLPAMMREIPLLRITN 274 Query: 241 ARFLQMEDAALADWCVAQLQKAGAAASDGVFLLDR 275 R LQM+D ALA WCVAQL+KAGAA SDGVFLLDR Sbjct: 275 ERHLQMDDLALARWCVAQLEKAGAAQSDGVFLLDR 309 >ref|ZP_08275067.1| beta-lactamase-like protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF31464.1| beta-lactamase-like protein [Oxalobacteraceae bacterium IMCC9480] Length = 295 Score = 341 bits (875), Expect = 6e-92, Method: Composition-based stats. Identities = 169/275 (61%), Positives = 205/275 (74%), Gaps = 3/275 (1%) Query: 1 MIDSGYVAHAEQTQTLVRHVLHQRGRERLDVLLNTHLHSDHCGGNAALHAAYGCRIAIPA 60 ++DSGY+ HA QT LV+H L R LD+L+NTHLHSDHCGGNA L Y CR IPA Sbjct: 23 LVDSGYLTHAPQTLALVQHALQGR---PLDLLVNTHLHSDHCGGNALLQQHYDCRTVIPA 79 Query: 61 AEDAKVRQWDEDALSYRATGQRCPRFTHDQVIRSGDVLRLGDLDWTALAAPGHDPHALLL 120 +E KVR WDEDALS+ ATGQ+C RF D + +G +RLGD+DW AL APGHDPH+L+L Sbjct: 80 SEAGKVRDWDEDALSFIATGQQCARFGFDATLSAGQTIRLGDMDWQALGAPGHDPHSLIL 139 Query: 121 YCAQEGVLISADALWRNGFGIIFPELDGESGFEEARATLELIRSLDVRTVIPGHGAPFTE 180 YC E +LISADALW NGFG+IFPELDGESGF EARATLELI +LDVR VIPGHGAPF + Sbjct: 140 YCPAERLLISADALWENGFGVIFPELDGESGFAEARATLELIATLDVRLVIPGHGAPFAD 199 Query: 181 VDDALEKAFSRLDYLQADPLRNAHNGIKVLVKFLLLERGRIALADLPTMMREIPLLRITN 240 + AL AFSRLDYL ADP+RNA N IKVL+KFLLLER ++AL + ++ +PL++ +N Sbjct: 200 IGKALATAFSRLDYLAADPVRNAQNAIKVLLKFLLLERQQLALDQVAIVLGGMPLVQESN 259 Query: 241 ARFLQMEDAALADWCVAQLQKAGAAASDGVFLLDR 275 RFLQ+ LA W +AQL + GAA L++R Sbjct: 260 RRFLQLPMEELAQWAMAQLVRVGAAQVQARLLVNR 294 >ref|YP_004754886.1| beta-lactamase-like protein [Collimonas fungivorans Ter331] gb|AEK64063.1| Beta-lactamase-like protein [Collimonas fungivorans Ter331] Length = 305 Score = 337 bits (865), Expect = 9e-91, Method: Composition-based stats. Identities = 171/275 (62%), Positives = 204/275 (74%), Gaps = 3/275 (1%) Query: 1 MIDSGYVAHAEQTQTLVRHVLHQRGRERLDVLLNTHLHSDHCGGNAALHAAYGCRIAIPA 60 ++DSGY++HA QT LV H L R LD LLNTHLHSDHCGGNAAL AYGC AIPA Sbjct: 33 LVDSGYLSHAAQTVALVAHGLQGR---PLDRLLNTHLHSDHCGGNAALQQAYGCHTAIPA 89 Query: 61 AEDAKVRQWDEDALSYRATGQRCPRFTHDQVIRSGDVLRLGDLDWTALAAPGHDPHALLL 120 A+ +VR WD DALSY TGQ+C F D +++GD+L LGDL+W LAA GHDPH+L+ Sbjct: 90 AQAEQVRAWDRDALSYSGTGQQCEPFGFDATLQAGDLLTLGDLEWEVLAAAGHDPHSLIF 149 Query: 121 YCAQEGVLISADALWRNGFGIIFPELDGESGFEEARATLELIRSLDVRTVIPGHGAPFTE 180 YC ++G+LISADALW NGFG+IFPELDG SGF E RATLELI SLDVR VIPGHG PF+ Sbjct: 150 YCQEQGILISADALWENGFGVIFPELDGASGFAEERATLELIASLDVRLVIPGHGGPFSG 209 Query: 181 VDDALEKAFSRLDYLQADPLRNAHNGIKVLVKFLLLERGRIALADLPTMMREIPLLRITN 240 V AL+ AFSRLDYL ADP RNA N IKVL+KFLLLER RI L ++ ++ +PL+ + N Sbjct: 210 VAAALDTAFSRLDYLAADPRRNAQNAIKVLLKFLLLERQRIKLTEVQQILTGLPLVAVAN 269 Query: 241 ARFLQMEDAALADWCVAQLQKAGAAASDGVFLLDR 275 R LQ+ +A L+ W VAQL +AGAA FL +R Sbjct: 270 QRHLQLSEADLSAWTVAQLVRAGAAEIRDGFLCNR 304 >ref|YP_556777.1| putative metallo-beta-lactamase superfamily protein [Burkholderia xenovorans LB400] gb|ABE28725.1| Putative metallo-beta-lactamase superfamily protein [Burkholderia xenovorans LB400] Length = 306 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 139/237 (58%), Positives = 168/237 (70%), Gaps = 3/237 (1%) Query: 1 MIDSGYVAHAEQTQTLVRHVLHQRGRERLDVLLNTHLHSDHCGGNAALHAAYGCRIAIPA 60 ++D+GY HA QT LVR L G LD+++NTHLHSDHCGGNA L A + CR IPA Sbjct: 31 LVDTGYATHAPQTLALVRQAL---GARPLDLIVNTHLHSDHCGGNALLQATWPCRTVIPA 87 Query: 61 AEDAKVRQWDEDALSYRATGQRCPRFTHDQVIRSGDVLRLGDLDWTALAAPGHDPHALLL 120 +E VR WD+ L++RATGQ C RFT I G LRLG LDW L APGHDPH+L+L Sbjct: 88 SEAGAVRDWDDTRLTFRATGQTCERFTFTGTIAPGAQLRLGALDWKVLGAPGHDPHSLML 147 Query: 121 YCAQEGVLISADALWRNGFGIIFPELDGESGFEEARATLELIRSLDVRTVIPGHGAPFTE 180 YCA E +LISADALW NGFG+IFPEL+GESGF E +A LE I LDVR VIPGHGAPFT Sbjct: 148 YCAGERILISADALWENGFGVIFPELEGESGFAEEQAVLEAIAKLDVRLVIPGHGAPFTN 207 Query: 181 VDDALEKAFSRLDYLQADPLRNAHNGIKVLVKFLLLERGRIALADLPTMMREIPLLR 237 V+ ALE+AFSR+ +L+ADP RNA N +KVL+ F LLE + L M+ + ++R Sbjct: 208 VEQALERAFSRVAWLRADPARNAKNALKVLIVFKLLEVRAMRFDTLLQMLDDAAVMR 264 >ref|ZP_06843681.1| beta-lactamase domain protein [Burkholderia sp. Ch1-1] gb|EFG68765.1| beta-lactamase domain protein [Burkholderia sp. Ch1-1] Length = 306 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 137/217 (63%), Positives = 160/217 (73%), Gaps = 3/217 (1%) Query: 1 MIDSGYVAHAEQTQTLVRHVLHQRGRERLDVLLNTHLHSDHCGGNAALHAAYGCRIAIPA 60 ++D+GY HA QT LVR L G LD+++NTHLHSDHCGGNA L A + CR IPA Sbjct: 31 LVDTGYATHAPQTLALVRQAL---GARPLDLIVNTHLHSDHCGGNALLQATWPCRTVIPA 87 Query: 61 AEDAKVRQWDEDALSYRATGQRCPRFTHDQVIRSGDVLRLGDLDWTALAAPGHDPHALLL 120 +E VR WDE L++RATGQ C RFT I G LRLG LDW L APGHDPH+L+L Sbjct: 88 SEADAVRDWDETRLTFRATGQTCERFTFTGTIAPGAQLRLGALDWEVLGAPGHDPHSLML 147 Query: 121 YCAQEGVLISADALWRNGFGIIFPELDGESGFEEARATLELIRSLDVRTVIPGHGAPFTE 180 YCA E +LISADALW NGFG+IFPEL+GESGF E +A LE I LDVR VIPGHGAPFT Sbjct: 148 YCAGERILISADALWENGFGVIFPELEGESGFAEEQAVLEAIAKLDVRLVIPGHGAPFTN 207 Query: 181 VDDALEKAFSRLDYLQADPLRNAHNGIKVLVKFLLLE 217 V+ ALE+AFSR+ +L+ADP RNA N +KVL+ F LLE Sbjct: 208 VEQALERAFSRVAWLRADPARNAKNALKVLIVFKLLE 244